Carg09522 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09522
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Dynein light chain
Location	Carg_Chr17: 6638304 .. 6638909 (-)
RNA-Seq Expression	Carg09522
Synteny	Carg09522

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGGAAGAAGAAGGCATTTCAGATTGATATAATCATCTTGTCGAGCAAATCCCCACCAGTTCTGTCTTTTCAGGTAAGAGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGTCTTCGACTGCAAATCCATTGCTGCCCACATCAAAAAGGTTCTCTCTCTCCCTTATCTCTCTCTCTCTAAGATCCCACGAGTATTCCTTATAAGAGAGTGAAAACCTCTCCCTGACAGTGGACCAAAATAGACAATATCGGCTAGCGGTAGGCTTAGGCTGCTACACTCTCTCTACTCTCTCTACCCATTTGAGGTGTATGTGTAGAAGAACATGGTAGCTTGAAGAGATTGGTTTGAAAATCTCAGGCTTTGATTCCTTGTTTGGTTGTGGACTTGCAGGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGATTTGA

mRNA sequence

TCTTGGAAGAAGAAGGCATTTCAGATTGATATAATCATCTTGTCGAGCAAATCCCCACCAGTTCTGTCTTTTCAGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGATTTGA

Coding sequence (CDS)

TCTTGGAAGAAGAAGGCATTTCAGATTGATATAATCATCTTGTCGAGCAAATCCCCACCAGTTCTGTCTTTTCAGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGATTTGA

Protein sequence

SWKKKAFQIDIIILSSKSPPVLSFQERMLEGKALVQDTDMPGKMQIQAMDAASQALDRYDDFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

Homology

[Close]

BLAST of Carg09522 vs. NCBI nr
Match: KAG6575532.1 (hypothetical protein SDJN03_26171, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34
Identity = 78/91 (85.71%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 91

[Close]

BLAST of Carg09522 vs. NCBI nr
Match: XP_022953777.1 (dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata] >XP_022953778.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-33
Identity = 77/90 (85.56%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 105
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of Carg09522 vs. NCBI nr
Match: XP_022992454.1 (dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >XP_022992455.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 5.8e-33
Identity = 76/91 (83.52%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASEALDRYDVLDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 91

[Close]

BLAST of Carg09522 vs. NCBI nr
Match: XP_038897874.1 (dynein light chain LC6, flagellar outer arm-like [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 8.3e-32
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKAL+QDTDMPGKMQIQAMDAAS+ALD YD             DFD+RYGSGWQCVV
Sbjct: 1   MLEGKALIQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGV 91

[Close]

BLAST of Carg09522 vs. NCBI nr
Match: XP_011659570.1 (dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypothetical protein Csa_016911 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGV 91

[Close]

BLAST of Carg09522 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-11
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 87
           M E KA++++ DMP  MQ  A+D A+QAL++++           +FD +Y   W C+VG 
Sbjct: 1   MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 88  NFGCFFTHSKGSFIYFKLETLNFLIFK 104
           NFG + TH    FIYF L  +  L+FK
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of Carg09522 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 87
           M++ KA++++ DM   MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1   MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 88  NFGCFFTHSKGSFIYFKLETLNFLIFK 104
           NFG + TH    FIYF L  +  L+FK
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Carg09522 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 87
           M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 88  NFGCFFTHSKGSFIYFKLETLNFLIFK 104
           NFG + TH    FIYF L  +  L+FK
Sbjct: 61  NFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Carg09522 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 87
           M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG 
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 88  NFGCFFTHSKGSFIYFKLETLNFLIFK 104
           NFG + TH    FIYF L  +  L+FK
Sbjct: 61  NFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Carg09522 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-10
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGS 87
           M + KA++++ DM   MQ  A+D A+QA+++Y+           +FD +Y   W C+VG 
Sbjct: 1   MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 88  NFGCFFTHSKGSFIYFKLETLNFLIFK 104
           NFG + TH    FIYF L  +  L+FK
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Carg09522 vs. ExPASy TrEMBL
Match: A0A6J1GP96 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.6e-34
Identity = 77/90 (85.56%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASQALDRYDVFDCKSIAAHIKKDFDDRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 105
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 90

[Close]

BLAST of Carg09522 vs. ExPASy TrEMBL
Match: A0A6J1JVQ9 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111488754 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.8e-33
Identity = 76/91 (83.52%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASEALDRYDVLDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 91

[Close]

BLAST of Carg09522 vs. ExPASy TrEMBL
Match: A0A5A7UW48 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002230 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.9e-32
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGV 91

[Close]

BLAST of Carg09522 vs. ExPASy TrEMBL
Match: A0A0A0K947 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.9e-32
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGV 91

[Close]

BLAST of Carg09522 vs. ExPASy TrEMBL
Match: A0A1S3CGU5 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500588 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.9e-32
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGI 106
           GSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGV 91

[Close]

BLAST of Carg09522 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 105
           GSNFGCFFTHSKG+FIYF+LETL FLIFKG
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKG 90

[Close]

BLAST of Carg09522 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKA V++TDMP KMQ+QAM  ASQ+LD +D             +FD+RYGSGWQCVV
Sbjct: 1   MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 105
           G+NFGCFFTHSKG+FIYF L TLNFLIFKG
Sbjct: 61  GTNFGCFFTHSKGTFIYFHLGTLNFLIFKG 90

[Close]

BLAST of Carg09522 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 84.0 bits (206), Expect = 8.1e-17
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 28  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVV 87
           MLEGKA++ DTDM   M+  A+  AS+ALD +D             +FD  YGSGWQC+V
Sbjct: 1   MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 88  GSNFGCFFTHSKGSFIYFKLETLNFLIFKG 105
           G++FG F TH  G FI+F + +L  L+FKG
Sbjct: 61  GTHFGSFVTHCSGCFIHFSVGSLTILLFKG 90

[Close]

BLAST of Carg09522 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 28 MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCV 74
          MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of Carg09522 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11
Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 39  DMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHS 98
           DMPG MQ  A   A   LD  +             +FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 99  KGSFIYFKLETLNFLIFK 104
            G FIYF ++ L  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of Carg09522 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575532.1	6.8e-34	85.71	hypothetical protein SDJN03_26171, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953777.1	2.0e-33	85.56	dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]...	[more]
XP_022992454.1	5.8e-33	83.52	dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >XP_02299245...	[more]
XP_038897874.1	8.3e-32	80.22	dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]	[more]
XP_011659570.1	1.4e-31	80.22	dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypoth...	[more]

BLAST of Carg09522 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	3.8e-11	40.23	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q22799	6.5e-11	39.08	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q24117	1.1e-10	39.08	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
O96860	1.1e-10	39.08	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q3MHR3	3.2e-10	37.93	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]

BLAST of Carg09522 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP96	9.6e-34	85.56	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111456205 PE=3 SV=1	[more]
A0A6J1JVQ9	2.8e-33	83.52	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111488754 PE=3 SV=1	[more]
A0A5A7UW48	6.9e-32	80.22	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G0...	[more]
A0A0A0K947	6.9e-32	80.22	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1	[more]
A0A1S3CGU5	6.9e-32	80.22	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500588 PE=3 SV=1	[more]

BLAST of Carg09522 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	1.1e-29	70.00	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	2.1e-28	67.78	Dynein light chain type 1 family protein	[more]
AT4G27360.1	8.1e-17	47.78	Dynein light chain type 1 family protein	[more]
AT1G52240.1	3.5e-12	59.32	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	3.9e-11	43.59	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 28..104 e-value: 3.0E-28 score: 109.9
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 32..103 e-value: 1.5E-20 score: 73.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 28..105
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 28..104 e-value: 1.5E-20 score: 75.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 25..103
None	No IPR available	PANTHER	PTHR11886:SF94	DYNEIN LIGHT CHAIN	coord: 28..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09522-RA	Carg09522-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity