Carg09510 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09510
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein UXT homolog
Location	Carg_Chr17: 6599216 .. 6602988 (+)
RNA-Seq Expression	Carg09510
Synteny	Carg09510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCGTTCTCTCCCGCGCCCGGTCTCTGCGTCTCCGAGGGGGTAGGTTCTTCGACAATCCCAGCCGGTCGCTCACCGTTAGTCGCAGCAACCGCATACAGCTTCTCCTCGCCGTCGCCGTCGCCGTCGTTCGTAGCATCCACTCAGCATTTAGTTATTGTATGTAGAGACAACTTCTCCTCTGCTTCAGCCGCGTTGATTCTCCATAGGTATGACGTACTGCTTTTACAACTTTACTCAATGTCATAGTTAATACTCACACTGCTCGCCATTGTCTAATAGTCTTCAAGCTTTTTAGTTGTTATATATGACGATTACATTGGATAAGTTCTTCCATCAACCAAATCTTATATCTAATCGCATTGGGTCAGATAATTGTCGACCTTTTTGTTTTTATTTATGAGTAAATTATTAGAGCATTTTATTTTCTAAATTAGGCTGTAATTGATGGGTAAATGCCTAATTAAAAGGATTTTAGAAAAAAGGAAAGAAAAAAAACTGAACTCAATTGTGGAAAGGTAGTAGGAACATGAGATGAAGCAGATAGATTAAGAAGCCAAAGAATCTTGATGATGAAGATTCTATGCAAGGATGAACTAACAAATCACAGATAGAGAAGGGGATATTGAAAACCAAAGGGTTTAGAAAGAAAGAAAAGAAAAATCTTGGAGCTTGAATTCCGCTCACTTTCCCTTGGAGAAGAGATGAAAACGTAATGGACTGAACAATTCTAACATGTTTAAATGACCATATTAATGTTTTTTTTACCATTTTTTCATCAATTGTACGTGTGGACTAACTTCCATACAAACTTGTTAGCATTGTTCGTATGGAATTTAAGATCTAGATTGTTCCTGTTAAATTCAAAAGGTTCGGGTCAGTGACCTTTTGTTTTAGGAACTCATGTACGTTATCCAGCTAAGATCTCGATTTTTGCTGTTAAATTCATTAGAATGTCGATTTCAAAATAAACCCAATTTTCATTCAGTACATTTGAATCTTGGGTCTATGTTAAATTCAGGTCTCCTAAATGTTTGTTTTGTTTCTAACAAATGCAAACCAACCCAACTAAATTGGTAAATAGCCCATAAATTATTGATGGATTGTTGATATTTTTCCCCTCCATGCAGTTAGATAAATTGTTTGGAATTTGAAATATAATTTTCCAGATAACCTAAATGTACAATTGTGTATGCAGGAGGATAGAAGTTTTGCCACTTTGTTGTTGATAACTATTTTAGAACATCCACAAGGCTGTCACGATCAGTTGGTGGTTATTGATCATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGTATGCATTTGTTTCAGATTCTCAACTTCATGCATTTTGAAGGATCCCAATGAAGCATTTACTATCTGACAATATATAGAATTTTCATCTAAATTGATGTTACAATTTTCTATCTAGCGATATATAGATTGATGATGGACATTAATGTGGACTTTGAGTACTTTGTTGGTTGAATTTTTTTCATTGCTTGGTTTTTAGACAATTTTTAAATTCAGTTTTGATGAAATTTAATTTCATTATTTATTAAAGCTCAAAACTTAAGTAGTAAAATTTCTTATAGAAATATTTATTTTGTACATGTGAAAATGCAAGCATAAAGTACAATGATGAAAATGAAATTTCTCAAAATGTTCTCTTTGTGCCCCATACATTGAATTGATTCCCTGCAAGCAAACAATGTCTAAGATTAGTTATTTCTTTAATTTGGGAGTTTTATAGGATCTTGGGAAGAGGAAAGGAAGAAAAATGATTGTTTGTGAGTATTTTTGAGAACTTGAGAGATGTAAAACTCATTTAACTGTTTTTTCTATATTGTTTGTTTTTTGGCAGGGATAAAGTGTTTGAGCAGCAGAAGGTGTTGTATCCTTTTTAATTCATTTGAAGCCTCCTCAGATTTATGGCTTCACTTCATTCCCAATTATCCGAAATACTTCTGTCGCTTGTGTTTTGTTGCATTGTCGATGGTATTTATGATGTTTAACACTTAACATTTCTTTACCATTAGTTCAGACCTTCGTCGGAACATTGAGAACTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGTAAGTTTTTCTTACCGAACTAGATAATGAATCTGGTGGCCCTTCTTTTTTAATTTCCTTTTACCATCTGTTAGCATTTGGGCCACCTCGGGTGCCTGTTATATTTGGTTGTCAGAAAACTTTTAAGGATTTTAATATTCTAGATAGGTGGCAATCATAGAGTTTAGATTCATTTGCTCTAGTGCCCTGTTACTTTATTGCTAGTCCCATTGTATATTAGGTCATCCTTTGGCGGTTAGATTAGATATCAAGCTATTTGGGAGTTATTATGTTTTTCTTATTTTTTATCTTTCAAAAGAATCAAAGGGAACAATAACTCTCATGTAGTTTTAGGTGATAGGACCCTCCTCCCCCCTCTTGAGCGCACTAAAAGCCTAAACAACCACAATATTGCCTATGTTTTCATTTCCCTTATTTATAATCAAATTCCTAATAAGAAACTTTTTAGCTAAATGACTAACCTTAGTATCATAGTAATAATATTTCAAAATGTCAAAATACAAGTTTAGTCTCCGAACTTTAGCTAAATGACCGGTTGTTCTAAATATGGCCCAAAATGGGCTATTCTATGGGTTAACTCACTCTTTAAAAAGGTGATCCTTATCCATTCCAATTAATGGTTAGACTAGGTTGAGTCGGATTGGTTAAACTTTGACTTTGGGCTGAATTTGGTTCGAGCCAAAGCCAAGACCCAACGACTCTCTCGCCCCCATTTAATTTACCTTTCTCAGGCGAATTTACTCGATTATGATTTGCACTTTTACAGGGCAGATACACGAAGAATATTTGTAGATGTTGGGCTCGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGGTAAGTGTTTTAATAAGTATTGCTGGTGTGGTTCAGACTAGTGCTTGAACACGCAAGTTTTAGGATCTTATGTTCCTTTAAGGTTTCAAATTTTCGTTTATTTAAGAGCCTCTATATGTTTTTGCTGTAACCACGCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTATGCATTTCATACTTCAAAATTTTCCGTTAATCAAATATTCATACTTCTGGGATCCTAAAACTTTCATTCATGCCCCTTTTAAGCTACTTTTTTTTTTTTTTTTAATTTTTCATTTGGAAGACAAGTGGGGTTGGTGAGAGGTGTACATACGATTATTTGAACATTTGATTTGCAGGTCTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGCACATGTATTTTAAGTTCCGTTCCTCATAATTCCTCCTTTTCTGGGAATGAAGATGGTCCTGAAGAATCACTGCTCTGTGTATAAAACCCGTAATTTTTATGCTTTTTGTAAACTTGTTCATCTTTTAGAATTTAAGAAGACAGATGGCTAATGAAAATACTGCGCCACCTTATTGATTGTGCATGCCATCTGACAATGGCAGAGTACACTTTCATGAACTTGAAAAAATTATGAATGGAATTAGATTGCATGTTTATT

mRNA sequence

TCTTTCGTTCTCTCCCGCGCCCGGTCTCTGCGTCTCCGAGGGGGTAGGTTCTTCGACAATCCCAGCCGGTCGCTCACCGTTAGTCGCAGCAACCGCATACAGCTTCTCCTCGCCGTCGCCGTCGCCGTCGTTCGTAGCATCCACTCAGCATTTAGTTATTGTATGTAGAGACAACTTCTCCTCTGCTTCAGCCGCGTTGATTCTCCATAGGAGGATAGAAGTTTTGCCACTTTGTTGTTGATAACTATTTTAGAACATCCACAAGGCTGTCACGATCAGTTGGTGGTTATTGATCATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGATAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGACCTTCGTCGGAACATTGAGAACTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGGCAGATACACGAAGAATATTTGTAGATGTTGGGCTCGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTCTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGCACATGTATTTTAAGTTCCGTTCCTCATAATTCCTCCTTTTCTGGGAATGAAGATGGTCCTGAAGAATCACTGCTCTGTGTATAAAACCCGTAATTTTTATGCTTTTTGTAAACTTGTTCATCTTTTAGAATTTAAGAAGACAGATGGCTAATGAAAATACTGCGCCACCTTATTGATTGTGCATGCCATCTGACAATGGCAGAGTACACTTTCATGAACTTGAAAAAATTATGAATGGAATTAGATTGCATGTTTATT

Coding sequence (CDS)

ATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGATAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGACCTTCGTCGGAACATTGAGAACTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGGCAGATACACGAAGAATATTTGTAGATGTTGGGCTCGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTCTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGCACATGTATTTTAA

Protein sequence

MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF

Homology

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BLAST of Carg09510 vs. NCBI nr
Match: XP_022954004.1 (protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 3.9e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 155

[Close]

BLAST of Carg09510 vs. NCBI nr
Match: XP_023548070.1 (protein UXT homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADT+RIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           THLIASIKAQIKLVCEGIRELLQLPAEKTVE HVF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 155

[Close]

BLAST of Carg09510 vs. NCBI nr
Match: KAG6575525.1 (Protein UXT-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.7 bits (753), Expect = 4.8e-76
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNF+NEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFQNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAH 154
           THLIASIKAQIKLVCEGIRELLQLPAEKTVE H
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGH 153

[Close]

BLAST of Carg09510 vs. NCBI nr
Match: XP_022992427.1 (protein UXT homolog [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAI+ERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAISERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQ EEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQTEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           THLIASIKAQIKLVCEGIRELLQLPAEKTVE  VF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGRVF 155

[Close]

BLAST of Carg09510 vs. NCBI nr
Match: XP_008462175.1 (PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like protein [Cucumis melo var. makuwa] >TYK04010.1 protein UXT-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG D+FRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

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BLAST of Carg09510 vs. ExPASy Swiss-Prot
Match: Q54ND3 (Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 56/136 (41.18%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 9   RNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVN 68
           R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + ++ T++N
Sbjct: 25  RLDSIKYYETFINETLNVDLNKSIEDREKVLENLENYLELKSNIELLIENKMDSMKTMIN 84

Query: 69  LGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIK 128
           LGSE YV+  V DT  I+VD+GLG HV++T  EA+KFI+ KE  L + +E  T  I  IK
Sbjct: 85  LGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFINEKETFLNKTVENQTKKINQIK 144

Query: 129 AQIKLVCEGIRELLQL 145
            +I L+  G++EL  L
Sbjct: 145 TKIDLIQNGLKELKHL 160

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BLAST of Carg09510 vs. ExPASy Swiss-Prot
Match: Q63ZY7 (Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.7e-18
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAN 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]

BLAST of Carg09510 vs. ExPASy Swiss-Prot
Match: Q9WTZ0 (Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-18
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYETFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]

BLAST of Carg09510 vs. ExPASy Swiss-Prot
Match: A7T0W1 (Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI--TNLTTLVN 70
           EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +L + V+
Sbjct: 13  EKIRKYEEFLDQRLAKDLEAVFKSQDEIVAKITEYTQLKSSIEQIQKTDLKGKDLRSRVD 72

Query: 71  LGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIK 130
           LG   + Q +V D  RIF+ VG GF VEFT SEAL FI  K   L   +++     A IK
Sbjct: 73  LGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEALNFIEKKLAHLQHSVDKLGKDAAKIK 132

Query: 131 AQIKLVCEGIREL 142
           A +KLV  G++EL
Sbjct: 133 AHMKLVLGGLQEL 145

[Close]

BLAST of Carg09510 vs. ExPASy Swiss-Prot
Match: Q32P97 (Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-17
Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLAKYLQLRNVIERLQEANHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDNLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMLLEGLREL 145

[Close]

BLAST of Carg09510 vs. ExPASy TrEMBL
Match: A0A6J1GRK9 (protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 155

[Close]

BLAST of Carg09510 vs. ExPASy TrEMBL
Match: A0A6J1JPT0 (protein UXT homolog OS=Cucurbita maxima OX=3661 GN=LOC111488735 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAI+ERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAISERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQ EEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQTEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           THLIASIKAQIKLVCEGIRELLQLPAEKTVE  VF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGRVF 155

[Close]

BLAST of Carg09510 vs. ExPASy TrEMBL
Match: A0A5D3BXW7 (Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002080 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG D+FRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]

BLAST of Carg09510 vs. ExPASy TrEMBL
Match: A0A1S3CHV4 (protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG D+FRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]

BLAST of Carg09510 vs. ExPASy TrEMBL
Match: A0A6J1E2W3 (protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 140/155 (90.32%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           M+VG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEAL FISL+EERLARQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLARQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE++VE HVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERSVEGHVF 155

[Close]

BLAST of Carg09510 vs. TAIR 10
Match: AT1G26660.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-38
Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 9   RNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVN 68
           R + +Q  EE +D+ LK  LVHA A RDK+FE+QK  SDLR+N+E LEKN + +L T VN
Sbjct: 5   RQKDLQLLEEIIDKGLKQKLVHATASRDKIFEEQKTLSDLRKNLETLEKNGVNSLKTRVN 64

Query: 69  LGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIK 128
           LGSEVY+Q  V DTR IF+DVGLGF+VEFT  EAL +I+ +EER  +Q+EEYT +I  IK
Sbjct: 65  LGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEALDYIAQREERTQKQLEEYTGVITQIK 124

Query: 129 AQIKLVCEGIRELLQLPAE 148
            +IKL    I+++L LP E
Sbjct: 125 GRIKLAHYQIQQILNLPEE 143

[Close]

BLAST of Carg09510 vs. TAIR 10
Match: AT1G26660.2 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 127.5 bits (319), Expect = 9.4e-30
Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 9   RNEKVQRFEEFVDRRLKPDLVHAIAERDKVF-------------------------EQQK 68
           R + +Q  EE +D+ LK  LVHA A R +                           E   
Sbjct: 5   RQKDLQLLEEIIDKGLKQKLVHATASRFRFIVVSAFVGFAGTRSLKNKKHCILLYREDSS 64

Query: 69  VFSDLRRNIENLEKNSITNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEAL 128
             SDLR+N+E LEKN + +L T VNLGSEVY+Q  V DTR IF+DVGLGF+VEFT  EAL
Sbjct: 65  FSSDLRKNLETLEKNGVNSLKTRVNLGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEAL 124

Query: 129 KFISLKEERLARQIEEYTHLIASIKAQIKLVCEGIRELLQLPAE 148
            +I+ +EER  +Q+EEYT +I  IK +IKL    I+++L LP E
Sbjct: 125 DYIAQREERTQKQLEEYTGVITQIKGRIKLAHYQIQQILNLPEE 168

The following BLAST results are available for this feature:

BLAST of Carg09510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954004.1	3.9e-78	100.00	protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein ...	[more]
XP_023548070.1	3.3e-77	98.71	protein UXT homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6575525.1	4.8e-76	98.69	Protein UXT-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022992427.1	8.2e-76	97.42	protein UXT homolog [Cucurbita maxima]	[more]
XP_008462175.1	3.5e-71	92.26	PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like pro...	[more]

BLAST of Carg09510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ND3	1.4e-22	41.18	Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV...	[more]
Q63ZY7	4.7e-18	41.98	Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1	[more]
Q9WTZ0	6.2e-18	41.98	Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2	[more]
A7T0W1	1.8e-17	38.35	Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1	[more]
Q32P97	6.8e-17	41.22	Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1	[more]

BLAST of Carg09510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRK9	1.9e-78	100.00	protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1	[more]
A0A6J1JPT0	3.9e-76	97.42	protein UXT homolog OS=Cucurbita maxima OX=3661 GN=LOC111488735 PE=4 SV=1	[more]
A0A5D3BXW7	1.7e-71	92.26	Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CHV4	1.7e-71	92.26	protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1	[more]
A0A6J1E2W3	1.5e-70	90.32	protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1	[more]

BLAST of Carg09510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26660.1	3.2e-38	56.83	Prefoldin chaperone subunit family protein	[more]
AT1G26660.2	9.4e-30	45.12	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 8..149
None	No IPR available	PANTHER	PTHR13345:SF4	PROTEIN UXT	coord: 8..149
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 41..144
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 30..134 e-value: 5.7E-19 score: 68.2
IPR004127	Prefoldin alpha-like	TIGRFAM	TIGR00293	TIGR00293	coord: 44..138 e-value: 9.4E-16 score: 56.1
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 8..150 e-value: 2.1E-29 score: 104.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09510-RA	Carg09510-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity