Carg09507 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09507
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cytochrome c oxidase assembly protein COX19-like
Location	Carg_Chr17: 6584308 .. 6587653 (+)
RNA-Seq Expression	Carg09507
Synteny	Carg09507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCAGGTACTCTACGAATCCCGATGGTTACAAACATAAGCATGTTTTCCTTTTTCTTTTCTTTTTTGGTTGAACTTATGTTAATTGCGAGGAGAGGATTCGAGTGGTTGAGGGAGTAGGATCTCGATTTTTGCTGTTAAATTCATAAGGTTCGGGTAAGTGACCGATTGTTCAAAGAGCTCGTGTTTTAGCCTTTTTTGGACCTCAAACTCCTTTTGGAAAATGAAAAGATTTGCAGAATTTCACTTCTAAATAAGGAGTTTCTATCAATTGATTGAATCCTATGAATGGTTCCTCAGCAATTTGTGTGATGGGGAGCTTGCTATTGCATCCTTTTAATTCCGGTGTGTTCTACCTATCAGATGGGTGGAACTTTGAACATTAAAACTTCGAAGTTAGGTGGGTTGATGGTGGTGTTTTACATGTCTATTAATAGAGCATATTCTTCAATGTAGAATGACTTGAATTACTTGATGACTATGGAGAATGCATTGAAAAAGAAGATATGGGGCTCTGAATAATTTCGATTTAGTTCTTGTTTCTTAGTATAGCTTCGTATCTCAGGCAGTGATTGCCATCATTTGCATCTAATATCTTACTGTAAGTTTTATGATCTGCAAAGGAACAAAGAGCTGGTTAAAATTGATTCTTACGTGCACATTACGTTTAGCTTTGTGAGTGATATGCATATTACTTGGAACGAGTGAACCCGGAAAAACTAGTTAGCTTATCTTTGCGATATTCTTTCTTCTTTGAGTTTTAATGGATAGAATGGAGGTTGGTTGCCTAAGATAGACAATTGATATGGTAGAAGTTGAATTGAATTGTAAAGCAATCAATTAGAATGTGGTTTGGATTGTGTTTTACAATATATGAATCCTGAGAACCATTTCTTATACTGAAAATGGGGTTGACACTTTTGTTGAGGATATCGAATGACACTTTTTGTTGAGGATTATTAAGAGTAGTCCCACGTTGGCTAATTAAGAGGAAGATCATGAGTTTATAAGTAAAGAACACTATCTCCATTGGTATGAGGCCTTTTGGGAAACCAAAAGTAAAACCACGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTATGAAGATTTGTGATTCCTAACAACTTTTATTGATTATTCTATTACCTCACGCAATATAAATATGGTGAAGCATCCAACTCATTAGAGCCTGTGATGACTTTGTTGAGGCTCGAACAGGAATGTCTGGCCATAAAAGAGACAAGGATGGCTGCTTAGTACCAATAAATTTGCGTTCGGGGGGAGGGACTTTACCAAGAAAAGTCATAGTTAAAAGCTTAGAATGCTTTGGTGGTGCAAAAGAAGAGAACCGGTTTATATTTGCTTAAAAAGAACGGCACATAGAATGGTATGGTTTCTTTTTCAGCTAATTTGATTTCGTGAGATCTTTAGTGATCCTTTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCGGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGTATTTCCTTTTTGGAAAAAATTTTGAAGGAATCTTTGTGTTCATTTCTTGCTTTATGATGCATGGGCTTTATTGCAGGAGAAGAAAGAATACCTGAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGTAAGATTCTTGACTTTTTATATCATCTTTTGTATAACAAAAGTAGCTTTGCTTTCTTATTTAAGATTCATAAACTTTTTGTTTGCGAGAACCTGGGTTGTTTATTATAATCGTATTAGTCATCCTTCATGGTGGTGCATGGTCAAGTATTTAAAAGAATTAGGGTGGCCATCATATACACAAAAATCAAGCTTTTCAGAGGCCTGCAGTTTCTAGAGCGTCAGCTGACCAAATTCCTAACTAAAAATGCCAACTTTCCCTTCTTTCTCTAGCTCGGTTATGTACCTACTAACTTCATGTGCCCTGAAAACTTGGAATGGACCTTTCCTTTCTTTTCTAACCAATTCTACACCCTCCCTCGCTTTATAGTCCCTCAGGGTAAGTTAAACGGATTTAGGAAATTGCAAATGCTTTAGAACCAGTTGAAGTAAATATTATGCCCATTGATTTCGGTTTATGATTTCAGTTTGAACTTGGGATACATTTCTTTTATGATTTCGGTTTGAACTTCGGATACATTTGTCAAGTGCAAATGAGAAGGTAACTGGATTGGAATCAAGCTAATTCGACCTTTACTTACTTTCTCGTCTATGATGGCTCTCTTCTTCCTCTTTGAGTTACAGTTCCACAATGTTTCATTTCTTTTCCTTCACTGCCACCTGAATTATTTTGAGTTACAATAATTGATTCTCAGAAAATTTGCACCGCTTTGTTTTGACTCCTAATCAAATGCTATGCAAATTGGTGGATTTGTTTCAACTTTATTTTAAGTAGCTCAGCTGAATGAGTATTTCACGTCATTTCATTGGATTCTTGCAGGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGGGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAAAGTCTAAAATTGTTCGGCCACAGAACCGTTTACTCACTCGTTCAAGTTATATCATCAACCAACCCTTCTATAACACGCTTTGAAGAAAGGAAATGTGTTTTTCCTTAATGTATTGTCTTTCATAACAGTGCCTCTTTAACTCCTTGCGTACATCTCATATGTTCTTATCAATTTTTCAATATTGAGAGCAACTTTTCAACAGTTTTTTCAATTTGATTAGTGAACAAAGTTGCAGGTGGTTGCGTTTCAACTATATTTGGCGCATTCCATGAGCAAAAACAGCGACTTGAATTACAAATAAATATTGATCTTCAAAACACTGGATCAGGAAAACTAAATGTTACCTCCTAACTGTCTTAAGCCTCCAAAGTGACAATATCATCAGATTCGTCTACCATCATCTCATTTCTGAAAAGGAGTTTCAAGTAGGGAAGAACCTTAGGTAGTACTAACAAATCTGCAACATTAACACTCATCAAGTCAAATGCAATGCAGGTTTTGTGCATGTGTCTCTCTTCGATCACTGGAATTTTAGGGTATCTTTGACTGAAGTGTGTAAGGACAATTCGATACGCTCCGGCCGAGTTCCCGATGTCTACAGCTTCTGAAGTTGTGCTGTGGTTTTTAGCCACGGCCTCATCCATCAAGCTGTCCTCAAAAGTGGCCTGTAACAAGACCATAAAAACTTGTTATAAGGTGTTATTCCGTCCATTTACCATGTTCTT

mRNA sequence

ATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCGGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGAGAAGAAAGAATACCTGAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGGGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAAAGTCTAAAATTGTTCGGCCACAGAACCGTTTACTCACTCGTTCAAGTTATATCATCAACCAACCCTTCTATAACACGCTTTGAAGAAAGGAAATGTGTTTTTCCTTAATGTATTGTCTTTCATAACAGTGCCTCTTTAACTCCTTGCGTACATCTCATATGTTCTTATCAATTTTTCAATATTGAGAGCAACTTTTCAACAGTTTTTTCAATTTGATTAGTGAACAAAGTTGCAGGTGGTTGCGTTTCAACTATATTTGGCGCATTCCATGAGCAAAAACAGCGACTTGAATTACAAATAAATATTGATCTTCAAAACACTGGATCAGGAAAACTAAATGTTACCTCCTAACTGTCTTAAGCCTCCAAAGTGACAATATCATCAGATTCGTCTACCATCATCTCATTTCTGAAAAGGAGTTTCAAGTAGGGAAGAACCTTAGGTAGTACTAACAAATCTGCAACATTAACACTCATCAAGTCAAATGCAATGCAGGTTTTGTGCATGTGTCTCTCTTCGATCACTGGAATTTTAGGGTATCTTTGACTGAAGTGTGTAAGGACAATTCGATACGCTCCGGCCGAGTTCCCGATGTCTACAGCTTCTGAAGTTGTGCTGTGGTTTTTAGCCACGGCCTCATCCATCAAGCTGTCCTCAAAAGTGGCCTGTAACAAGACCATAAAAACTTGTTATAAGGTGTTATTCCGTCCATTTACCATGTTCTT

Coding sequence (CDS)

ATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCGGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGAGAAGAAAGAATACCTGAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGGGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAA

Protein sequence

MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE

Homology

[Close]

BLAST of Carg09507 vs. NCBI nr
Match: XP_022953732.1 (cytochrome c oxidase assembly protein COX19-like isoform X1 [Cucurbita moschata] >KAG7014061.1 Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.5 bits (493), Expect = 4.0e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 93

[Close]

BLAST of Carg09507 vs. NCBI nr
Match: KAG6575522.1 (Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 9.0e-46
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFGT+SQASLSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTASQASLSGDKLE 93

[Close]

BLAST of Carg09507 vs. NCBI nr
Match: XP_023522653.1 (cytochrome c oxidase assembly protein COX19-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKL 93
          ECRMEKNLMAKQDMTELGFGTSSQASLSGDKL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKL 92

[Close]

BLAST of Carg09507 vs. NCBI nr
Match: XP_022992451.1 (cytochrome c oxidase assembly protein COX19-like [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.0e-45
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFGTSSQASLS DKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSSDKLE 93

[Close]

BLAST of Carg09507 vs. NCBI nr
Match: XP_023549276.1 (cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.4 bits (485), Expect = 3.4e-45
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGF TSSQASLSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 93

[Close]

BLAST of Carg09507 vs. ExPASy Swiss-Prot
Match: A8E4L1 (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14
Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL
Sbjct: 1  MSTAMNF-GSKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG 81
          ECRME+ LMA++ + +LGFG
Sbjct: 61 ECRMERQLMAQEPLEKLGFG 79

[Close]

BLAST of Carg09507 vs. ExPASy Swiss-Prot
Match: O14056 (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox19 PE=3 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-14
Identity = 43/94 (45.74%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 6  SFGGNRGLRPV----PPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLE 65
          SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYL+
Sbjct: 2  SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 66 CRMEKNLMAKQDMTELGF-----GTSSQASLSGD 91
          CRM+  L  K DM  LGF      TS+  S S D
Sbjct: 62 CRMDTGLFGKDDMKNLGFHGDENATSTSLSSSND 95

[Close]

BLAST of Carg09507 vs. ExPASy Swiss-Prot
Match: Q49B96 (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS   +F G +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK+YL
Sbjct: 1  MSTAMNF-GTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG 81
          ECRME+ LM ++ + +LGFG
Sbjct: 61 ECRMERKLMLQEPLEKLGFG 79

[Close]

BLAST of Carg09507 vs. ExPASy Swiss-Prot
Match: Q4P821 (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=COX19 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 17 PPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTE 76
          PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16 PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 77 LGF 80
          LGF
Sbjct: 76 LGF 78

[Close]

BLAST of Carg09507 vs. ExPASy Swiss-Prot
Match: Q54IA0 (Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689 GN=cox19 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-13
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 14 RPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQD 73
          +P PP+KG FPLDH   C +    Y+NCL  +   S  C   SK+YL+CRM+ NLMAK+D
Sbjct: 11 KPTPPDKGSFPLDHDSECSKPMLAYVNCLSENNGLSRFCMEFSKEYLKCRMDNNLMAKED 70

Query: 74 MTELGFGTSSQASL 88
          M   GF    +A +
Sbjct: 71 MDNFGFEEVKKAKI 84

[Close]

BLAST of Carg09507 vs. ExPASy TrEMBL
Match: A0A6J1GP22 (cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456178 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 93

[Close]

BLAST of Carg09507 vs. ExPASy TrEMBL
Match: A0A6J1JTL1 (cytochrome c oxidase assembly protein COX19-like OS=Cucurbita maxima OX=3661 GN=LOC111488751 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.7e-46
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFGTSSQASLS DKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSSDKLE 93

[Close]

BLAST of Carg09507 vs. ExPASy TrEMBL
Match: A0A5A7UTU4 (Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00460 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFG+ SQA+LSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 93

[Close]

BLAST of Carg09507 vs. ExPASy TrEMBL
Match: A0A1S3CGW0 (cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC103500603 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          ECRMEKNLMAKQDMTELGFG+ SQA+LSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 93

[Close]

BLAST of Carg09507 vs. ExPASy TrEMBL
Match: A0A6J1HMG5 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464297 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.7e-43
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 94
          +CRMEKNLMAKQDM ELGFG  SQ SLSGDKLE
Sbjct: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLE 93

[Close]

BLAST of Carg09507 vs. TAIR 10
Match: AT1G69750.1 (cytochrome c oxidase 19-2 )

HSP 1 Score: 146.7 bits (369), Expect = 9.0e-36
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDK 92
          +CRM KNLMAKQDM ELGF    +   + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of Carg09507 vs. TAIR 10
Match: AT1G66590.1 (cytochrome c oxidase 19-1 )

HSP 1 Score: 146.7 bits (369), Expect = 9.0e-36
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDK 92
          +CRM KNLMAKQDM ELGF    +   + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of Carg09507 vs. TAIR 10
Match: AT1G66590.2 (cytochrome c oxidase 19-1 )

HSP 1 Score: 144.4 bits (363), Expect = 4.5e-35
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 3   AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLEC 62
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL+C
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 63  RMEKNLMAKQDMTELGFGTSSQASLSGDK 92
           RM KNLMAKQDM ELGF    +   + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

The following BLAST results are available for this feature:

BLAST of Carg09507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953732.1	4.0e-46	100.00	cytochrome c oxidase assembly protein COX19-like isoform X1 [Cucurbita moschata]...	[more]
KAG6575522.1	9.0e-46	98.92	Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma sub...	[more]
XP_023522653.1	1.5e-45	100.00	cytochrome c oxidase assembly protein COX19-like, partial [Cucurbita pepo subsp....	[more]
XP_022992451.1	2.0e-45	98.92	cytochrome c oxidase assembly protein COX19-like [Cucurbita maxima]	[more]
XP_023549276.1	3.4e-45	98.92	cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg09507 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8E4L1	1.5e-14	45.00	Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 ...	[more]
O14056	2.5e-14	45.74	Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce...	[more]
Q49B96	1.2e-13	43.75	Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=...	[more]
Q4P821	1.2e-13	52.38	Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS...	[more]
Q54IA0	3.6e-13	45.95	Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of Carg09507 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP22	2.0e-46	100.00	cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1JTL1	9.7e-46	98.92	cytochrome c oxidase assembly protein COX19-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5A7UTU4	1.2e-43	94.62	Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CGW0	1.2e-43	94.62	cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HMG5	7.7e-43	93.55	cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschat...	[more]

BLAST of Carg09507 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69750.1	9.0e-36	72.53	cytochrome c oxidase 19-2	[more]
AT1G66590.1	9.0e-36	72.53	cytochrome c oxidase 19-1	[more]
AT1G66590.2	4.5e-35	73.03	cytochrome c oxidase 19-1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 31..65 e-value: 9.1E-9 score: 35.2
None	No IPR available	PANTHER	PTHR47565	CYTOCHROME C OXIDASE 19-1	coord: 1..86
None	No IPR available	PANTHER	PTHR47565:SF4	CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19-LIKE	coord: 1..86
None	No IPR available	PROSITE	PS51808	CHCH	coord: 28..70 score: 14.933468
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 27..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09507-RA	Carg09507-RA	mRNA