Carg09269 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09269
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
LocationCarg_Chr05: 2228001 .. 2229774 (-)
RNA-Seq ExpressionCarg09269
SyntenyCarg09269
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCCCCCCTTTCTCTCCCTCTCTCTCTGGTTTTGCCATTTCTCTTAAAACAACCATAGTTCTCTTCTCTGCACTCATCTTTTTCAGAATCTGAGCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTAATCTTCTCTGATGATTTTCATATTCTTCCCCACCATGGAAACAAAAAGGTCAATAGAAAACTAACTGTTGGCTCTATTTCTTGAACTTCTTTAGGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGGTATAATACCTTTCTCTTTCATTTTTACTCGTTTTCTTCATCAAATGGTTTGGTTTTTGTTAACACTTTTTGGGTCTTTTTTTTCTCTTGTTTTTTTGACAGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGGTACCCATTTCAATTCCCTCACTCTCTTGCAGTTTTTTTGAAGTGATATCACAGTCAACTTATAGATAGCAATCTGTTTCAATAACATTCTAAATGAAAAGTGGTTTTGAGTTGAATACTTTAGCAAGATCCCACAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTTAAACCGTGAGTTTGATGGCGATACGTAACGAGTTAAAACGGACAATATCTACTAGTAGTGGGTTTGGGCAGTTACAAATGGTACCAGCAATGACCCTGGACACCAAGAGGGTGGGATTGTGAGATCCCACATCGGTTGGAGAGGGAAACAAAGTATTCCTTATAAGGGTATAGAAACCTCTCCCTACCAGACGCGTTTTAAAATTGCGAGGCTGACGGCAATACATAACAGGCTAAAACGGACAATATCTGCTAGCGATGGATTTGGACAAAGATTACGTGAGTTGGGGAGTAGTTGAAACATGAAAATGTTTAAGGAAACTAAAGCACTAATCCTAAATGATACTCAGATATCTCCATTTTCTTTCAACTGGGAATTTGGTTCCCAAAGTGGCATATTCCAATTTCCAAGAGACTCTTTCTTTTACCAAAAGTTACCTTTTTCCCAACTTTTTCAGCTGGTGTTGGTGAGAATCTGCTGCCTGATAGAGAAAAAGAAACTTCTATCAAGAATCCAATTCCTTTCCCTTTTTGGGGATGTGTGCATAGCTCTAGCATATTTTTTCCCTTAGAAAGTTACTGTTCTTGATAACTTAATCTAGATGGAAAATGTCCAATGAAAAATTAACCATTCAAGTTTGCATTAGTGACAATGACATAAACAGATGAACACCCTTCTCTGTTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA

mRNA sequence

TAGCCCCCCTTTCTCTCCCTCTCTCTCTGGTTTTGCCATTTCTCTTAAAACAACCATAGTTCTCTTCTCTGCACTCATCTTTTTCAGAATCTGAGCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA

Coding sequence (CDS)

ATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA

Protein sequence

MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTTPSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAAAFNLFFFAATVTFWWSMFC
Homology
BLAST of Carg09269 vs. NCBI nr
Match: KAG7029572.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA
Sbjct: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180

Query: 181 AFNLFFFAATVTFWWSMFC 200
           AFNLFFFAATVTFWWSMFC
Sbjct: 181 AFNLFFFAATVTFWWSMFC 199

BLAST of Carg09269 vs. NCBI nr
Match: XP_022962123.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata])

HSP 1 Score: 378.3 bits (970), Expect = 4.2e-101
Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLC+LIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA
Sbjct: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180

Query: 181 AFNLFFFAATVTFWWSMFC 200
           AFNLFFFAATVTFWWSMFC
Sbjct: 181 AFNLFFFAATVTFWWSMFC 199

BLAST of Carg09269 vs. NCBI nr
Match: XP_023546942.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           P TTVPS TLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA
Sbjct: 121 PFTTVPSTTLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180

Query: 181 AFNLFFFAATVTFWWSMFC 200
           AFNLFFF ATVTFWWSMFC
Sbjct: 181 AFNLFFFTATVTFWWSMFC 199

BLAST of Carg09269 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 172/203 (84.73%), Postives = 178/203 (87.68%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCT ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTAILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTAM SQSPP  ASGCVY SS S TGTPTSTT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTPTSTT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAG 180
           PSTT+P  T GTTTNPST PPST    TTSPSVFGSGISPTG VG G  GN+MDGSAAAG
Sbjct: 121 PSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGSGISPTGGVGLG--GNSMDGSAAAG 180

Query: 181 LTAAAFNLFFFAATVTFWWSMFC 200
           L AA  NLFFF ATVTFW S+FC
Sbjct: 181 LNAAVSNLFFFIATVTFWLSVFC 201

BLAST of Carg09269 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80
Identity = 172/207 (83.09%), Postives = 179/207 (86.47%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPT--- 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS S TGTPT   
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGTPTSTT 120

Query: 121 -STTPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGS 180
            STTPSTT+P  T GTTTNPST PPST    TTSPSVFG+GISPTG VG G  GN+MDGS
Sbjct: 121 PSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLG--GNSMDGS 180

Query: 181 AAAGLTAAAFNLFFFAATVTFWWSMFC 200
           AAAGL AAA NLFFF ATVTFW SMFC
Sbjct: 181 AAAGLNAAASNLFFFTATVTFWLSMFC 205

BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-33
Identity = 89/158 (56.33%), Postives = 108/158 (68.35%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAV +L  +I LA   HSS ++C+CK+G S+  LQKTLDYACGAGADC PI Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVY--SSSSSNTGTPTS 120
           NT+K HCSYAVNS+FQ+KGQ  G+CDF+GTA  S S P   + C +  S+S S T TP +
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDP-SYTTCPFPASASGSGTTTPVT 120

Query: 121 TTPSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISP 157
           TTPST VP+    T T P T  PST     +  SGI+P
Sbjct: 121 TTPSTRVPTT---TNTRPYTITPSTGGGLGI-PSGINP 152

BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-27
Identity = 85/191 (44.50%), Postives = 118/191 (61.78%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           M+VLL   LI   FT +S+A+YC+CK+G ++Q LQK +DYACG GADCT I   G C+QP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NT+K+HC  AVNSY+Q+K     +CDF+G A  S +PP  AS C+  SSSS  GTPT+ T
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSS--GTPTTGT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           P+T  P++   TT  P+T  P+T T  S  G+  S   + G   +G N     + G+  +
Sbjct: 121 PTTGTPTSGTPTTGTPTTGTPTTGTPTS--GTPTSGFPNTGTPNTGTNTGMPNSNGMPTS 180

Query: 181 AFNLFFFAATV 192
           + +  F   T+
Sbjct: 181 SSSSVFPGTTL 185

BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.5e-26
Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLL  +L+   FT +S+A+ C+CKD  ++  LQK +D+ACG GADC  I   G C+QP
Sbjct: 1   MAVLLPLFLLSFMFT-YSNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NT+K+HC  AVNSY+Q+K     +CDF+G A++S SPP   S C+  SSSS+ GTPT+  
Sbjct: 61  NTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCL--SSSSSNGTPTAGY 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPS 149
           PST   +     TTNPST   + +T P+
Sbjct: 121 PSTGNSTTASPGTTNPSTGNSTNSTLPT 144

BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.5e-26
Identity = 82/180 (45.56%), Postives = 108/180 (60.00%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MA L+L  L+ L+   HSSAS+C+CK G SD  LQ TLDYACG GADC P      CF P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           + ++ HC+YAVNS+FQ+KGQ  GSC+F GTA  + S P   +GC + +S+S +   T+ T
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDP-SYTGCAFPTSASGSSGSTTVT 120

Query: 121 PSTTVPSATLGTTTNP---STPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGL 178
           P TT P  +  TTT P   +  P S   +  VFG G S  G+ G G + +    S+A  L
Sbjct: 121 PGTTNPKGSPTTTTLPGSGTNSPYSGNPTNGVFG-GNSTGGTTGTGINPDYTTDSSAFAL 177

BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0

Query: 5   LLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTIK 64
           L+ YL+ L    H+SAS+C+CK G SD  LQKTLDYACG GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTST--TPS 124
            HC+YAVNS+FQ+KGQ   SC+F+GTA L+ + P   +GC + SS+S +    ST  TP 
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDP-SYTGCAFPSSASGSSGSGSTTVTPG 123

Query: 125 TTVPSATLGTTTNP-STPPPSTTTSPSVFGSGISPTGSVG 162
              P  +   TT P    P S T S  + G  I+     G
Sbjct: 124 KNSPKGSNSITTFPGGNSPYSGTPSTGLLGGNITDATGTG 162

BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.0e-101
Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLC+LIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA
Sbjct: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180

Query: 181 AFNLFFFAATVTFWWSMFC 200
           AFNLFFFAATVTFWWSMFC
Sbjct: 181 AFNLFFFAATVTFWWSMFC 199

BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 172/207 (83.09%), Postives = 179/207 (86.47%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPT--- 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS S TGTPT   
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGTPTSTT 120

Query: 121 -STTPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGS 180
            STTPSTT+P  T GTTTNPST PPST    TTSPSVFG+GISPTG VG G  GN+MDGS
Sbjct: 121 PSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLG--GNSMDGS 180

Query: 181 AAAGLTAAAFNLFFFAATVTFWWSMFC 200
           AAAGL AAA NLFFF ATVTFW SMFC
Sbjct: 181 AAAGLNAAASNLFFFTATVTFWLSMFC 205

BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 172/207 (83.09%), Postives = 178/207 (85.99%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPT--- 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTAM SQSPP  ASGCVY SS S TGTPT   
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTPTTTT 120

Query: 121 -STTPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGS 180
            STTPSTT+P  T GTTTNPST PPST    TTSPSVFG GISPTG VG G  GN MDGS
Sbjct: 121 PSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGGGISPTGGVGLG--GNTMDGS 180

Query: 181 AAAGLTAAAFNLFFFAATVTFWWSMFC 200
           AAAGL AAA NLFFF ATVTFW+SMFC
Sbjct: 181 AAAGLNAAASNLFFFTATVTFWFSMFC 205

BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 172/207 (83.09%), Postives = 178/207 (85.99%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPT--- 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTAM SQSPP  ASGCVY SS S TGTPT   
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTPTTTT 120

Query: 121 -STTPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGS 180
            STTPSTT+P  T GTTTNPST PPST    TTSPSVFG GISPTG VG G  GN MDGS
Sbjct: 121 PSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGGGISPTGGVGLG--GNTMDGS 180

Query: 181 AAAGLTAAAFNLFFFAATVTFWWSMFC 200
           AAAGL AAA NLFFF ATVTFW+SMFC
Sbjct: 181 AAAGLNAAASNLFFFTATVTFWFSMFC 205

BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.6e-76
Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MA++LLCYL+F+AFT HSSA+YC+CKDGQSDQALQK+LDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTG----TP 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  S SPP  ASGCVY SS S TG    TP
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSPSGTGTPTTTP 120

Query: 121 TSTTPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGS 180
           TSTTP+TT+P  T GTTTNPST PPST    TTSPSVFGSGISPTG  G G SGN++DGS
Sbjct: 121 TSTTPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTG--GVGSSGNSIDGS 180

Query: 181 AAAGLTAAAFNLFFFAATVTFWWSMF 199
           AAA LTAAA N  FF ATV FW S+F
Sbjct: 181 AAAALTAAASNFLFFTATVAFWLSLF 204

BLAST of Carg09269 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 89/158 (56.33%), Postives = 108/158 (68.35%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAV +L  +I LA   HSS ++C+CK+G S+  LQKTLDYACGAGADC PI Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVY--SSSSSNTGTPTS 120
           NT+K HCSYAVNS+FQ+KGQ  G+CDF+GTA  S S P   + C +  S+S S T TP +
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDP-SYTTCPFPASASGSGTTTPVT 120

Query: 121 TTPSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISP 157
           TTPST VP+    T T P T  PST     +  SGI+P
Sbjct: 121 TTPSTRVPTT---TNTRPYTITPSTGGGLGI-PSGINP 152

BLAST of Carg09269 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 94/199 (47.24%), Postives = 119/199 (59.80%), Query Frame = 0

Query: 4   LLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTI 63
           +LL  L+ L+ T+ SSA YC+CKDG  D  LQ ++DYACG  ADC PI   G C+QP+TI
Sbjct: 3   VLLGLLLLLSLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVE-ASGCVYSSSSSNTGTPTSTTPS 123
           K HC +AVNSYFQ   QV GSC+FSGTA  + +PP   A+GC+Y SS S+T +P STTP 
Sbjct: 63  KSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSPSSTRSPPSTTPP 122

Query: 124 T-TVPSATLGTTTNPSTPPPST--TTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTA 183
           T T P  T GTT  P TP P T    +P VFG    PTG       G+       + +  
Sbjct: 123 TGTTP--TNGTTPFPGTPFPGTPFPGTPPVFG----PTGVFNPSNPGSGASSLGTSSVFT 182

Query: 184 AAFNL--FFFAATVTFWWS 197
             F+L  F + + V F +S
Sbjct: 183 LCFSLLAFLWGSDVRFGFS 195

BLAST of Carg09269 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-31
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 0

Query: 4   LLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTI 63
           LLL  L  LA T++SSA+YC+C+DG  ++ LQ ++DYACG   DC PI + GPC+QPNTI
Sbjct: 3   LLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQS-PPVEASGCVYSSSSSNTGTPTSTTPS 123
           K HC +AVN+YFQR GQ+ GSC+FSGTA  SQ+ P    +GC+Y SS  + G    TTP+
Sbjct: 63  KSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSPGSAG----TTPT 122

Query: 124 TTVPSATLGTTTNPSTP---------PPSTTTSPSVFGSGISPTGSVGF 163
           T  PS   GT T P  P         P     +PS+F   IS   S+GF
Sbjct: 123 TGTPS---GTQTFPGPPAFGPAGDFDPSGNNGAPSLF---ISIALSLGF 161

BLAST of Carg09269 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 )

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 85/191 (44.50%), Postives = 118/191 (61.78%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           M+VLL   LI   FT +S+A+YC+CK+G ++Q LQK +DYACG GADCT I   G C+QP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NT+K+HC  AVNSY+Q+K     +CDF+G A  S +PP  AS C+  SSSS  GTPT+ T
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSS--GTPTTGT 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAA 180
           P+T  P++   TT  P+T  P+T T  S  G+  S   + G   +G N     + G+  +
Sbjct: 121 PTTGTPTSGTPTTGTPTTGTPTTGTPTS--GTPTSGFPNTGTPNTGTNTGMPNSNGMPTS 180

Query: 181 AFNLFFFAATV 192
           + +  F   T+
Sbjct: 181 SSSSVFPGTTL 185

BLAST of Carg09269 vs. TAIR 10
Match: AT1G26450.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0

Query: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60
           MAVLL  +L+   FT +S+A+ C+CKD  ++  LQK +D+ACG GADC  I   G C+QP
Sbjct: 1   MAVLLPLFLLSFMFT-YSNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQP 60

Query: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTT 120
           NT+K+HC  AVNSY+Q+K     +CDF+G A++S SPP   S C+  SSSS+ GTPT+  
Sbjct: 61  NTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCL--SSSSSNGTPTAGY 120

Query: 121 PSTTVPSATLGTTTNPSTPPPSTTTSPS 149
           PST   +     TTNPST   + +T P+
Sbjct: 121 PSTGNSTTASPGTTNPSTGNSTNSTLPT 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7029572.11.1e-101100.00PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_022962123.14.2e-10199.50PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata][more]
XP_023546942.14.7e-10098.49PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo][more]
XP_038886488.11.7e-8184.73PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida][more]
XP_004144176.12.4e-8083.09PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMO... [more]
Match NameE-valueIdentityDescription
Q9FZ863.0e-3356.33PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3... [more]
Q93V724.2e-2744.50PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4... [more]
Q9FZD03.5e-2648.65Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370... [more]
Q9FNQ23.5e-2645.56PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1... [more]
Q9SD841.3e-2545.63PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2... [more]
Match NameE-valueIdentityDescription
A0A6J1HDW52.0e-10199.50PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0KDN81.2e-8083.09X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=... [more]
A0A5A7V8S92.0e-8083.09PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3BDH02.0e-8083.09PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1BPT86.6e-7678.16PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=L... [more]
Match NameE-valueIdentityDescription
AT1G18650.12.1e-3456.33plasmodesmata callose-binding protein 3 [more]
AT1G13830.11.3e-3147.24Carbohydrate-binding X8 domain superfamily protein [more]
AT2G03505.13.8e-3149.11Carbohydrate-binding X8 domain superfamily protein [more]
AT1G69295.13.0e-2844.50plasmodesmata callose-binding protein 4 [more]
AT1G26450.12.5e-2748.65Carbohydrate-binding X8 domain superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainSMARTSM00768X8_clscoord: 21..106
e-value: 4.2E-41
score: 152.5
IPR012946X8 domainPFAMPF07983X8coord: 22..92
e-value: 4.1E-21
score: 75.5
NoneNo IPR availableGENE3D1.20.58.1040coord: 15..119
e-value: 4.7E-10
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..151
NoneNo IPR availablePANTHERPTHR31044:SF95PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1coord: 1..196
IPR044788Carbohydrate-binding X8 domain-containing protein, plantPANTHERPTHR31044BETA-1,3 GLUCANASEcoord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09269-RACarg09269-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma