Carg09269 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCCCCCTTTCTCTCCCTCTCTCTCTGGTTTTGCCATTTCTCTTAAAACAACCATAGTTCTCTTCTCTGCACTCATCTTTTTCAGAATCTGAGCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTAATCTTCTCTGATGATTTTCATATTCTTCCCCACCATGGAAACAAAAAGGTCAATAGAAAACTAACTGTTGGCTCTATTTCTTGAACTTCTTTAGGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGGTATAATACCTTTCTCTTTCATTTTTACTCGTTTTCTTCATCAAATGGTTTGGTTTTTGTTAACACTTTTTGGGTCTTTTTTTTCTCTTGTTTTTTTGACAGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGGTACCCATTTCAATTCCCTCACTCTCTTGCAGTTTTTTTGAAGTGATATCACAGTCAACTTATAGATAGCAATCTGTTTCAATAACATTCTAAATGAAAAGTGGTTTTGAGTTGAATACTTTAGCAAGATCCCACAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTTAAACCGTGAGTTTGATGGCGATACGTAACGAGTTAAAACGGACAATATCTACTAGTAGTGGGTTTGGGCAGTTACAAATGGTACCAGCAATGACCCTGGACACCAAGAGGGTGGGATTGTGAGATCCCACATCGGTTGGAGAGGGAAACAAAGTATTCCTTATAAGGGTATAGAAACCTCTCCCTACCAGACGCGTTTTAAAATTGCGAGGCTGACGGCAATACATAACAGGCTAAAACGGACAATATCTGCTAGCGATGGATTTGGACAAAGATTACGTGAGTTGGGGAGTAGTTGAAACATGAAAATGTTTAAGGAAACTAAAGCACTAATCCTAAATGATACTCAGATATCTCCATTTTCTTTCAACTGGGAATTTGGTTCCCAAAGTGGCATATTCCAATTTCCAAGAGACTCTTTCTTTTACCAAAAGTTACCTTTTTCCCAACTTTTTCAGCTGGTGTTGGTGAGAATCTGCTGCCTGATAGAGAAAAAGAAACTTCTATCAAGAATCCAATTCCTTTCCCTTTTTGGGGATGTGTGCATAGCTCTAGCATATTTTTTCCCTTAGAAAGTTACTGTTCTTGATAACTTAATCTAGATGGAAAATGTCCAATGAAAAATTAACCATTCAAGTTTGCATTAGTGACAATGACATAAACAGATGAACACCCTTCTCTGTTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA TAGCCCCCCTTTCTCTCCCTCTCTCTCTGGTTTTGCCATTTCTCTTAAAACAACCATAGTTCTCTTCTCTGCACTCATCTTTTTCAGAATCTGAGCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA ATGGCGGTTCTCTTGCTCTGTTATCTCATTTTCTTGGCCTTCACTAGCCATTCAAGTGCAAGCTATTGTATTTGTAAAGATGGACAGAGCGATCAAGCCCTTCAGAAGACACTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTCCAATTCTTCAAAATGGCCCTTGTTTTCAACCCAACACTATAAAGGATCACTGTAGCTATGCTGTTAATAGCTACTTTCAAAGGAAGGGTCAGGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCTTAGCCAGTCTCCTCCTGTTGAAGCTTCTGGGTGTGTTTATTCTTCCAGTTCCAGCAACACAGGAACTCCAACCAGCACCACCCCGTCAACCACCGTGCCCAGCGCAACACTGGGAACCACCACAAACCCGTCAACACCACCACCCTCGACCACAACCTCCCCATCGGTGTTTGGGAGCGGGATAAGCCCGACAGGTAGTGTCGGTTTCGGTGGTAGCGGGAATAACATGGATGGCAGTGCTGCTGCAGGTCTCACTGCAGCAGCCTTTAACTTGTTCTTCTTCGCAGCCACTGTCACATTTTGGTGGTCAATGTTCTGTTAA MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGTPTSTTPSTTVPSATLGTTTNPSTPPPSTTTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAAAFNLFFFAATVTFWWSMFC Homology
BLAST of Carg09269 vs. NCBI nr
Match: KAG7029572.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Carg09269 vs. NCBI nr
Match: XP_022962123.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata]) HSP 1 Score: 378.3 bits (970), Expect = 4.2e-101 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Carg09269 vs. NCBI nr
Match: XP_023546942.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100 Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Carg09269 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81 Identity = 172/203 (84.73%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Carg09269 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus]) HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80 Identity = 172/207 (83.09%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.0e-33 Identity = 89/158 (56.33%), Postives = 108/158 (68.35%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.2e-27 Identity = 85/191 (44.50%), Postives = 118/191 (61.78%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.5e-26 Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.5e-26 Identity = 82/180 (45.56%), Postives = 108/180 (60.00%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25 Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.0e-101 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80 Identity = 172/207 (83.09%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80 Identity = 172/207 (83.09%), Postives = 178/207 (85.99%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80 Identity = 172/207 (83.09%), Postives = 178/207 (85.99%), Query Frame = 0
BLAST of Carg09269 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 6.6e-76 Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 0
BLAST of Carg09269 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34 Identity = 89/158 (56.33%), Postives = 108/158 (68.35%), Query Frame = 0
BLAST of Carg09269 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31 Identity = 94/199 (47.24%), Postives = 119/199 (59.80%), Query Frame = 0
BLAST of Carg09269 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.8e-31 Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 0
BLAST of Carg09269 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 ) HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28 Identity = 85/191 (44.50%), Postives = 118/191 (61.78%), Query Frame = 0
BLAST of Carg09269 vs. TAIR 10
Match: AT1G26450.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27 Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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