Carg09089 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09089
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCHC domain-containing protein 7-like isoform X2
Location	Carg_Chr11: 1641308 .. 1647515 (+)
RNA-Seq Expression	Carg09089
Synteny	Carg09089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGATAGTAGTAGTATAAACCGATTGTGTGGAAACCCTAGCGCCACCCCAAAGTTGAAGAAAAAAACTGCCAAGTTTGCTGAGTTCTTCTCCTCACCATTCAATTAGGGCTTCTTACCAGATTGCAGTTTGATTCAGTTTCGTGTTTGGAGGATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTCGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGAAACTGGTGCCCGAACTAGCGGAACCATCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTCAAGAAGCTGGAAACTGAAGAGCCCCACGTCAGTATTTTTCTACTTCCGCTTTAGTCTTTTTGAAAGAATCTAGTGGGAGGGAATGAGATATAGAAGGATTGTTTATCTTCTAGGACATTTACACGGCTTAAGAGACGGGTTCTTCAGTTCTGTTGATGACACGACGACTGTGGCGAGAAAGAAATACTTAACTCGGTCTAGTAGGGCTCATTGAACTTAAAACTGTGTACTTAGGGAAATTTTGCCTGCTTTAGTGGTTGATGGAAAACAAAATATTTGACAATATTACACGAGCTTCAAAGAACAAACCATCTTAAATTGCTATCCAGATATTGTATTTCCTTTCCTCTAATCTGATAGAAAGGATCGTGGGGTTTGGCTATTTCTCATTGTCTTGCTGCTTCCTTTGATTTTAGGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATCGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATCGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTGTGAGTCCCTTTATCTTCTCTGAATTACCGTTAAGGAAAATTGATGTTTGTGGAGGCTTAGTTTTGTATCTCTTTCATATTATTCTCCCAGCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTAAAGGTCAGGAAGATACACAATCTATCTGCATCTTACTTCCCTCTGTTTTTCTTTTCTTACAGCTTTCCTAGATGCTTCAAACTTTTCATTGGGGAGAATTCTCTTATATGGAGATGTGTTGTTCTCAATGTGCTATCCTTATATCCATGCATACTTTTTTTTTTTTTTTAATGAAAATTAGAAATTATACTCTTTATCTAATATCTTTGTTGCTGAGGTAAATTCTTTTAACATTTTAATGTCTCCATAGTCCTCTGGTCTGAAATCCATATTCCTCATTCTGCGGCTAGAATATGTTTATTGGCTTTCTTATGATCAATCTTTATCCAGTTTATTCACAATCAACCCGAGTGTCTCACAGTTTTGTAATATTTTCTTCTTCTACATTCTCCTGTTTCTTGCTCATTTCGATTTCATGGGAAATTAAAAACCTGCTCCTTACTATTCCCAGGCACGAGACTGCTATATTTGCAACAAAGTTGGGCATCGTGCAAAAGACTGTCCAGAGAAGCATTTGAAGGTTTCTTCAAGCTCAAAAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGCCAAACTAGTTATCCAGATGATGATCTTAAGGTCCTAATATAGTGTACTTTCTTGGTTCTTTTCCAGAGTTATTTTGCATGCTGTATCATTTTTCTAAACGTGTCTTGTAAAACTTTTTTTTTTTCCAGAACATACAATGCTACATTTGTAAGAAATTAGGTCACTTATGTTGTGTGAATTCCACCAGCGACACTTCAATAGACATTTCCTGCTATAAATGTGGACAGGCTGGACATACTGGTCTGGTAAGTCCTCTATGCTCATATGTCATATCTGACTGTACGATGTTCACATGATACTCGTATCACCTTTTGTTTTCCATTTAAGACGTTCTCTTGTTTTGTTTACATATTACTTTTGTGTTATATATATATATATATAAAAAAAAAAGTTTGTCTTGCTTTTATATGCAATTGCCCACTTGTTTTGCTCTCACGCTGGCTGGCAGTAATAAGCAGCAAATCTTGGCGGCAGTTCTGAATTTTTCCGATTTTTGAGCATTGACAAATTTCTAGATTGTTGGGCTTACGTATGACTGTATTTTCTTGCGCAAGTCAAATAATTGGGATTAATGAGTTGCTAATGTATGCTTGTAATTAAAGAGTTCATTGTTTAGTGAGTCAACATGTGAGAAAGTAGGAGAGGGGGCCAATATTGGCAGGGTCTATAGTGTTGCTTTCACTTATTATTGTTGTATGTCTCAGTACACGCGAGCAAAGAATATTTAAATACAGGAACTTGTAGTCACTTGAACAACAGACAGAAGAGCTCATTCCTTTTAAATTGAAGTTCCTTGCTTCTATGTTTATTGCACATGGTTGATTAATCTTTTGGGCTGTGTGTATGTGAATCTACAGGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTACAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGTAGATAAAAAAACTTACATATTGGCTTATATTTTTCAACAAATAATAAGGAGAATATTTATTTTGATAGCCATTTGGTCTTTGGTTATGATTATTAATCTTATAATTAGTACGTGCACTTGTGAGGTTTTTTGTTTTGTTGTCTATGTTTTATATATGTTTTCAAAAATCAAGCCTAAGCTTTGAAAACTTAAAAAAGTAGTTTCACAAACTTATTTTTGTTTTGGAATTTGACTAAGAATTCAAAGGATTTCTTTAGGAAGATGAAACCCATTATAGAGAAATGGTGATAAAACAAGCATAATTTAAAAAAAAAAAAAACCAAGGACTAAGGCCTTGTTTGACAACCATTTAGCTTTTGGTTTTTGGCATTTGAAAATTGAGCTTATAAATACTATTCCCATTTATGGGATTTGTTGATATGTTTTTAAGAATCCAGCCAATGTTTGAAAACTTAACATAATAGTTTTCAAAAAATTGTATTTTTGTAGTATTTGGATAATTAAAGTAAGAAAGATTAAATCCATTGTAGAGAAATGACAAGATAATAAGCACAATTTTAAAAATCCAGAGACAAAAAAATAAAGGTTTTTATAAACAGTGTCTATACTGAATTTATACTTCATGGCGCTTGCTCAGGGTGGCAAGAAGAATCGTGAGGAAGCCTCTGGTGCTGCATCACCTAGCCCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAATGCACTAGTTCCGCCAAGGTAGACAAAAAAGCAGGGCCTTTTGTCCGTGAGTGCACAATTTCTGCCAAGGTAGATAAATAAAGCTTACATATCGGTTTTTGATTTTTGGTTTTTGGTTTCTGATAATTAAGCTTATAAATAGTACTTTATGAGGTTTTTTGTTTTGTTGTCCAACTTTTCACATATGTTTTAAAAAACCAAGCCTAAGTTTTTAAAACTAAAAAAATAGTTTTAAAAACTTATTTCTTGGAATGTGACTAAGAATTCAAACAATTTCTCAAGAAAGATAAAGCCCCTTGATAGAGAAATGATGTAAAATCAAGCACAATTTTCAAAAACCAAAAACAAAAGTCCCATTCATAACCATTTAGTTTTTGGTTTTTTGTGTTTGAAACTTGAGCCTATAAATACTACTTCCATTCATGGGTTTGGTTGTTTACTTTTTATGTGTTTTAAAAAATCAAGTCAACTTTTAAAAACATAATACAATAGTTTTCAAAAACTTTGTTAGAATTTGAAAACTTAAAACAGTAGTTTAAAGAACTGTTGAAGCTTTAATACTATAGTAACAAAGATGAAATCCATTGTAGAGAGATGATAAGAAAACAAGCCCAAATTAACAAATCAGAAATAATAAATTAAATGATTATCGAACAGTTTCATATACTGAATTTATACTTTATGGAGCGTGCCCAGGGCGGGAAGAAGAATCGGGAGGATGCCTCCGGTGCTGCATCACCCAACCCATGCTATAGATGTGGTGAAGATGGGCATTTTTCCCGTGAGTGCCCAAGTTCCACCAAGGTAGATAAAAAAAACCCTATACATCGGCCTGTTTTATTAGGGAAAAGTTATGAGGAGAGAAAATGTTCAGTTTGATACATTTACTTATATTTCCTTTCAACATGTTATTTTAAACTTGTACTTTATGGAACTTGCTCAGGGTAGCAAGAGGAATATTGAAGTAGCTTCTGGCACTGAGTCAACTAACTCATGCTATAGATGTGGTGGAGAAGGGCATTTTGCCCGAGAGTGCACAAGTTCCACCAAGGTAAATAAAAGATCCTACATTTTGGCATGTTTTATCAGATGAAGATTAGGAGTTCTTTTTGTTATGCATACTTATATATCTTGTGAGAATGTGATTCTAACATTTTATTTCATGGAGCTTTCACAGGGTGGCAAGAGGAATCGTGAGTTATCGAACCATAAATCGAGGTCAAAAACAGAAGAAACGTACCATATGGGGTCAAAATCTGCACCTCATAATCTTGCAAAGGCTCATAGCAAGAAGAAAAAGATAAACTATGACGAAAAATACACTAACCTGCCTAGGAAGTCGGGACAAAAGGGTCGCTGGATGATGGAGGATCCGGGTCCTCGTAACTTCTTCAATGGCACATCCATGAATAATAACTGGAATTCTCCTGTTACACCATCTCGGTGGGATCATGGTTATTATACGGAGTACTCTGGCCACTATGCAAGCCCTCAATTTTCTGGTCGCTATGCAAGCCCTCCTCGATCTTCCGGTTACTATGCAAGTCCTCAATCTCTCACAAGGGAGCGCACATTACATCCAGGGACTCCATTGTCATTCCAATCCAGTATAGCGCCTCAGAACGGATTCTCGGCATCTCGATTTGGGGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAGAAAGTCTTATTTGATTAGAGTGATTGGTAGCTAGCTGTGGGAAAGATATACTGCTCAAAGATTTGTTATTTTGTCGATTGGTTCAATTGCATAATATAAGATAATTGTAAGTTATTGCTTCATTTGTGATATACCAGATTAACAGTTTTGAGTTTAGTTGATGACATGATTCCATATTGCTCCTGGCCTGTCAGGTTTCTTCATTTGCATAATTTTAAACATCTATCAATTACTCTGAATCATATTCCTTGATTTTTCTTTCTTGCGAACAGTTCGACTACGTTGTCGGGTTAGCGATGAATTATGCTGGTTATGGTTACACCTCTCTATACATGTTGATTCAGCATGCGAATATTATTATCAGAAAAGTTCCAATATCTTAAGTGGAAATGAAAATGACTTCTTACTTCAGATATTACCATTGGCAGAAGTTCTATCAGGCTAACGATTGTTTTCAAATGATTCAATTTCCGACTTTTTAGTCCAGAGACTTTCACTGGGATTCAATTTCTGTATTGAGCTTGATTCTCACATTGTCATTTCTTCTTCATTGCAGATGTTTTGGACGGTGACATCGAACACGAGCAACATGGAGCAGGCTCAACACTCTTCTACATTGTTGTTGTACATTGCTATGAAAATCTGAAAGGCAAATAGCTTCTGCTCTGTTATCACTTGGTGTTCCCATGGCTCTTCTTCTGTTTCTTGTAGATGATTGAACTTGAGCTACATCTTAGATGTCAATAGTTTATTTTAGTTGGTGTGACTCCAGTAATTTAAAGAACTAGTTTGTGTAATGTACAATTTCTGAATTCTCCAGGGAAAGTTACAAATTTCATTTTTTTTCATACTAGAAGAAA

mRNA sequence

GAGAGAGAGAGATAGTAGTAGTATAAACCGATTGTGTGGAAACCCTAGCGCCACCCCAAAGTTGAAGAAAAAAACTGCCAAGTTTGCTGAGTTCTTCTCCTCACCATTCAATTAGGGCTTCTTACCAGATTGCAGTTTGATTCAGTTTCGTGTTTGGAGGATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTCGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGAAACTGGTGCCCGAACTAGCGGAACCATCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTCAAGAAGCTGGAAACTGAAGAGCCCCACGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATCGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATCGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTAAAGGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTACAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGGTGGCAAGAAGAATCGTGAGGAAGCCTCTGGTGCTGCATCACCTAGCCCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAATGCACTAGTTCCGCCAAGGTAGACAAAAAAGCAGGGCCTTTTGTCCGTGAGTGCACAATTTCTGCCAAGGGCGGGAAGAAGAATCGGGAGGATGCCTCCGGTGCTGCATCACCCAACCCATGCTATAGATGTGGTGAAGATGGGCATTTTTCCCGTGAGTGCCCAAGTTCCACCAAGGGTAGCAAGAGGAATATTGAAGTAGCTTCTGGCACTGAGTCAACTAACTCATGCTATAGATGTGGTGGAGAAGGGCATTTTGCCCGAGAGTGCACAAGTTCCACCAAGGGTGGCAAGAGGAATCGTGAGTTATCGAACCATAAATCGAGGTCAAAAACAGAAGAAACGTACCATATGGGGTCAAAATCTGCACCTCATAATCTTGCAAAGGCTCATAGCAAGAAGAAAAAGATAAACTATGACGAAAAATACACTAACCTGCCTAGGAAGTCGGGACAAAAGGGTCGCTGGATGATGGAGGATCCGGGTCCTCGTAACTTCTTCAATGGCACATCCATGAATAATAACTGGAATTCTCCTGTTACACCATCTCGGTGGGATCATGGTTATTATACGGAGTACTCTGGCCACTATGCAAGCCCTCAATTTTCTGGTCGCTATGCAAGCCCTCCTCGATCTTCCGGTTACTATGCAAGTCCTCAATCTCTCACAAGGGAGCGCACATTACATCCAGGGACTCCATTGTCATTCCAATCCAGTATAGCGCCTCAGAACGGATTCTCGGCATCTCGATTTGGGGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAGAAAGTCTTATTTGATTAGAGTGATTGGTAGCTAGCTGTGGGAAAGATATACTGCTCAAAGATTTGTTATTTTGTCGATTGGTTCAATTGCATAATATAAGATAATTGTAAGTTATTGCTTCATTTGTGATATACCAGATTAACAGTTTTGAGTTTAGTTGATGACATGATTCCATATTGCTCCTGGCCTGTCAGGTTTCTTCATTTGCATAATTTTAAACATCTATCAATTACTCTGAATCATATTCCTTGATTTTTCTTTCTTGCGAACAGTTCGACTACGTTGTCGGGTTAGCGATGAATTATGCTGGTTATGGTTACACCTCTCTATACATGTTGATTCAGCATGCGAATATTATTATCAGAAAAGTTCCAATATCTTAAGTGGAAATGAAAATGACTTCTTACTTCAGATATTACCATTGGCAGAAGTTCTATCAGGCTAACGATTGTTTTCAAATGATTCAATTTCCGACTTTTTAGTCCAGAGACTTTCACTGGGATTCAATTTCTGTATTGAGCTTGATTCTCACATTGTCATTTCTTCTTCATTGCAGATGTTTTGGACGGTGACATCGAACACGAGCAACATGGAGCAGGCTCAACACTCTTCTACATTGTTGTTGTACATTGCTATGAAAATCTGAAAGGCAAATAGCTTCTGCTCTGTTATCACTTGGTGTTCCCATGGCTCTTCTTCTGTTTCTTGTAGATGATTGAACTTGAGCTACATCTTAGATGTCAATAGTTTATTTTAGTTGGTGTGACTCCAGTAATTTAAAGAACTAGTTTGTGTAATGTACAATTTCTGAATTCTCCAGGGAAAGTTACAAATTTCATTTTTTTTCATACTAGAAGAAA

Coding sequence (CDS)

ATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTCGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGAAACTGGTGCCCGAACTAGCGGAACCATCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTCAAGAAGCTGGAAACTGAAGAGCCCCACGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATCGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATCGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTAAAGGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTACAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGGTGGCAAGAAGAATCGTGAGGAAGCCTCTGGTGCTGCATCACCTAGCCCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAATGCACTAGTTCCGCCAAGGTAGACAAAAAAGCAGGGCCTTTTGTCCGTGAGTGCACAATTTCTGCCAAGGGCGGGAAGAAGAATCGGGAGGATGCCTCCGGTGCTGCATCACCCAACCCATGCTATAGATGTGGTGAAGATGGGCATTTTTCCCGTGAGTGCCCAAGTTCCACCAAGGGTAGCAAGAGGAATATTGAAGTAGCTTCTGGCACTGAGTCAACTAACTCATGCTATAGATGTGGTGGAGAAGGGCATTTTGCCCGAGAGTGCACAAGTTCCACCAAGGGTGGCAAGAGGAATCGTGAGTTATCGAACCATAAATCGAGGTCAAAAACAGAAGAAACGTACCATATGGGGTCAAAATCTGCACCTCATAATCTTGCAAAGGCTCATAGCAAGAAGAAAAAGATAAACTATGACGAAAAATACACTAACCTGCCTAGGAAGTCGGGACAAAAGGGTCGCTGGATGATGGAGGATCCGGGTCCTCGTAACTTCTTCAATGGCACATCCATGAATAATAACTGGAATTCTCCTGTTACACCATCTCGGTGGGATCATGGTTATTATACGGAGTACTCTGGCCACTATGCAAGCCCTCAATTTTCTGGTCGCTATGCAAGCCCTCCTCGATCTTCCGGTTACTATGCAAGTCCTCAATCTCTCACAAGGGAGCGCACATTACATCCAGGGACTCCATTGTCATTCCAATCCAGTATAGCGCCTCAGAACGGATTCTCGGCATCTCGATTTGGGGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAG

Protein sequence

MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKKSAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEHNARSCLKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTEYSGHYASPQFSGRYASPPRSSGYYASPQSLTRERTLHPGTPLSFQSSIAPQNGFSASRFGGFSNEGRRKSYGWW

Homology

[Close]

BLAST of Carg09089 vs. NCBI nr
Match: KAG7021663.1 (Cold shock protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP
Sbjct: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSP 300
           NARSCLKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSP
Sbjct: 241 NARSCLKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSP 300

Query: 301 CYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGED 360
           CYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGED
Sbjct: 301 CYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGED 360

Query: 361 GHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHK 420
           GHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHK
Sbjct: 361 GHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHK 420

Query: 421 SRSKTEETYHMGSKSAPHNLAKAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFF 480
           SRSKTEETYHMGSKSAPHNLAKAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFF
Sbjct: 421 SRSKTEETYHMGSKSAPHNLAKAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFF 480

Query: 481 NGTSMNNNWNSPVTPSRWDHGYYTEYSGHYASPQFSGRYASPPRSSGYYASPQSLTRERT 540
           NGTSMNNNWNSPVTPSRWDHGYYTEYSGHYASPQFSGRYASPPRSSGYYASPQSLTRERT
Sbjct: 481 NGTSMNNNWNSPVTPSRWDHGYYTEYSGHYASPQFSGRYASPPRSSGYYASPQSLTRERT 540

Query: 541 LHPGTPLSFQSSIAPQNGFSASRFGGFSNEGRRKSYGWW 580
           LHPGTPLSFQSSIAPQNGFSASRFGGFSNEGRRKSYGWW
Sbjct: 541 LHPGTPLSFQSSIAPQNGFSASRFGGFSNEGRRKSYGWW 579

[Close]

BLAST of Carg09089 vs. NCBI nr
Match: KAG6587697.1 (DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 579/672 (86.16%), Postives = 579/672 (86.16%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP
Sbjct: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSCLK                                                     
Sbjct: 241 NARSCLKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQTSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKKLGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420
           CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF
Sbjct: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420

Query: 421 VRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTEST 480
           VRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTEST
Sbjct: 421 VRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTEST 480

Query: 481 NSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAHSKK 540
           NSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAHSKK
Sbjct: 481 NSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAHSKK 540

Query: 541 KKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTEYS 580
           KKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTEYS
Sbjct: 541 KKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTEYS 600

[Close]

BLAST of Carg09089 vs. NCBI nr
Match: XP_022933990.1 (uncharacterized protein LOC111441232 isoform X3 [Cucurbita moschata])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.9e-310
Identity = 568/675 (84.15%), Postives = 570/675 (84.44%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAK---GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420
           CGEEGHFARECTSSAK   GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA
Sbjct: 361 CGEEGHFARECTSSAKLAQGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420

Query: 421 GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGT 480
           GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVASG 
Sbjct: 421 GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVASGA 480

Query: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540
           ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH
Sbjct: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540

Query: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 580
           SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT
Sbjct: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 600

[Close]

BLAST of Carg09089 vs. NCBI nr
Match: XP_022933989.1 (uncharacterized protein LOC111441232 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.9e-310
Identity = 568/675 (84.15%), Postives = 570/675 (84.44%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420
           CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF
Sbjct: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420

Query: 421 VRECTISAK---GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGT 480
           VRECTISAK   GGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVASG 
Sbjct: 421 VRECTISAKRAQGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVASGA 480

Query: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540
           ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH
Sbjct: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540

Query: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 580
           SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT
Sbjct: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 600

[Close]

BLAST of Carg09089 vs. NCBI nr
Match: XP_022933987.1 (uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata] >XP_022933988.1 uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1067.4 bits (2759), Expect = 4.4e-308
Identity = 568/678 (83.78%), Postives = 570/678 (84.07%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAK---GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420
           CGEEGHFARECTSSAK   GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA
Sbjct: 361 CGEEGHFARECTSSAKLAQGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420

Query: 421 GPFVRECTISAK---GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVA 480
           GPFVRECTISAK   GGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVA
Sbjct: 421 GPFVRECTISAKRAQGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVA 480

Query: 481 SGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA 540
           SG ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA
Sbjct: 481 SGAESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA 540

Query: 541 KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG 580
           KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG
Sbjct: 541 KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG 600

[Close]

BLAST of Carg09089 vs. ExPASy Swiss-Prot
Match: Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.7e-25
Identity = 76/211 (36.02%), Postives = 101/211 (47.87%), Query Frame = 0


Query: 205 DSWGACYNCGEEGHNAVSCTSA-----KRKKPCFVCGSLEHNARSCLKACSRLRGEASAA 264
           +S  +C NCG+EGH A  C  A     +R   CF CG   H +R C           S A
Sbjct: 13  ESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEA------RSGA 72

Query: 265 VSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAK 324
             A +C+RCGE GH +R+C +SAK          GAA    CY+CG+EGH +R+C SS  
Sbjct: 73  AGAMTCFRCGEAGHMSRDCPNSAK---------PGAAKGFECYKCGQEGHLSRDCPSSQG 132

Query: 325 VDKKAGPFVRECTISAKGGKKNREDASGAAS-PNPCYRCGEDGHFSRECPSSTKGSKRNI 384
             +              G K+ R  A G  S    CY+CG+ GH SR+CP+   G     
Sbjct: 133 GSR-----------GGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGG----- 189

Query: 385 EVASGTESTNSCYRCGGEGHFARECTSSTKG 410
              SG     +CY+CG  GH +R+C +   G
Sbjct: 193 --YSGA-GDRTCYKCGDAGHISRDCPNGQGG 189

[Close]

BLAST of Carg09089 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 8.2e-23
Identity = 72/210 (34.29%), Postives = 95/210 (45.24%), Query Frame = 0


Query: 210 CYNCGEEGHNAVSC----------TSAKRKKPCFVCGSLEHNARSCLKACSRLRGEASAA 269
           CYNCGE GH +  C            ++  + C+ CG   H AR C  A +   G+   A
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGN---GDQRGA 161

Query: 270 VSASS--CYRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSS 329
               +  CY CG+ GH AR+CT  + G    R    G      CY CG+ GHFAR+CT  
Sbjct: 162 TKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKG--GNDGCYTCGDVGHFARDCTQK 221

Query: 330 AKVD--KKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSK 389
                 +  G     C      G   R+ A+       CY+CG  GH +R+C     G  
Sbjct: 222 VAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSG-- 281

Query: 390 RNIEVASGTESTNSCYRCGGEGHFARECTS 406
                  G  + N+CY+CG EGHFAREC+S
Sbjct: 282 -------GGGNDNACYKCGKEGHFARECSS 297

[Close]

BLAST of Carg09089 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-15
Identity = 61/182 (33.52%), Postives = 78/182 (42.86%), Query Frame = 0


Query: 232 CFVCGSLEHNARSC---LKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKN 291
           CF CG + H A+ C       S   G    +     CY CG+ GHFAR+C  S  G    
Sbjct: 96  CFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGG---- 155

Query: 292 REEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGA 351
                G     PCY CGE GH A++C   +  ++  G           GG+ +  D    
Sbjct: 156 -NSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGG----------GGGRGSGGDG--- 215

Query: 352 ASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTK 411
                CY CG  GHF+R+C  +  G+        G  ST  CY CGG GH A+ CTS   
Sbjct: 216 -----CYMCGGVGHFARDCRQNGGGN------VGGGGST--CYTCGGVGHIAKVCTSKIP 246

[Close]

BLAST of Carg09089 vs. ExPASy Swiss-Prot
Match: Q3T0Q6 (Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-14
Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = 0


Query: 260 VSASSCYRCGEEGHFARECTSSAKGGKKNREEASG-----AASPSPCYRCGEEGHFAREC 319
           +S++ C++CG  GH+AREC +    G+  R    G     ++ P  CYRCGE GH A++C
Sbjct: 1   MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60

Query: 320 ---TSSAKVDKKAGPFVRECTISAKGGKKNREDA-------------SGAASPNPCYRCG 379
                +     + G   ++C    K  K+ RE                  A    CY CG
Sbjct: 61  DLQEDACYNCGRGGHIAKDC----KEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCG 120

Query: 380 EDGHFSRECPS---STKGSKRNIEVASGTESTNSCYRCGGEGHFARECT 405
           E GH  ++C        G   ++ +     S  +CYRCG  GH ARECT
Sbjct: 121 EFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECT 165

[Close]

BLAST of Carg09089 vs. ExPASy Swiss-Prot
Match: O42395 (Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-13
Identity = 59/185 (31.89%), Postives = 74/185 (40.00%), Query Frame = 0


Query: 232 CFVCGSLEHNARSCLKACS-----RLRGEASAAVSASS----CYRCGEEGHFARECTSSA 291
           CF CG   H AR C          R RG A     +SS    CYRCGE GH A++C    
Sbjct: 6   CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC---- 65

Query: 292 KGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNR 351
                             CY CG  GH A++C    +  ++       C    K G   R
Sbjct: 66  -----------DLQEDKACYNCGRGGHIAKDCKEPKREREQC------CYNCGKPGHLAR 125

Query: 352 EDASGAASPNPCYRCGEDGHFSRECPS---STKGSKRNIEVASGTESTNSCYRCGGEGHF 405
           +     A    CY CGE GH  ++C        G   ++ +     S  +CYRCG  GH 
Sbjct: 126 D--CDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 167

[Close]

BLAST of Carg09089 vs. ExPASy TrEMBL
Match: A0A6J1F1A8 (uncharacterized protein LOC111441232 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 4.3e-310
Identity = 568/675 (84.15%), Postives = 570/675 (84.44%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420
           CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF
Sbjct: 361 CGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPF 420

Query: 421 VRECTISAK---GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGT 480
           VRECTISAK   GGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVASG 
Sbjct: 421 VRECTISAKRAQGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVASGA 480

Query: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540
           ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH
Sbjct: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540

Query: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 580
           SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT
Sbjct: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 600

[Close]

BLAST of Carg09089 vs. ExPASy TrEMBL
Match: A0A6J1F6D8 (uncharacterized protein LOC111441232 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 4.3e-310
Identity = 568/675 (84.15%), Postives = 570/675 (84.44%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAK---GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420
           CGEEGHFARECTSSAK   GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA
Sbjct: 361 CGEEGHFARECTSSAKLAQGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420

Query: 421 GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGT 480
           GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVASG 
Sbjct: 421 GPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVASGA 480

Query: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540
           ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH
Sbjct: 481 ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAH 540

Query: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 580
           SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT
Sbjct: 541 SKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYT 600

[Close]

BLAST of Carg09089 vs. ExPASy TrEMBL
Match: A0A6J1F6E2 (uncharacterized protein LOC111441232 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 1067.4 bits (2759), Expect = 2.1e-308
Identity = 568/678 (83.78%), Postives = 570/678 (84.07%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           SAKKRKRKVKKLETEEP VVVTEGEKIETIP IDQVDSEEPKITEIETTPLIDQVDSE P
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCLK----------------------------------------------------- 300
           NARSC K                                                     
Sbjct: 241 NARSCFKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDL 300

Query: 301 ----------------------------------------ACSRLRGEASAAVSASSCYR 360
                                                   ACSRLRGEASAAVSASSCYR
Sbjct: 301 KNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLACSRLRGEASAAVSASSCYR 360

Query: 361 CGEEGHFARECTSSAK---GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420
           CGEEGHFARECTSSAK   GGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA
Sbjct: 361 CGEEGHFARECTSSAKLAQGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKA 420

Query: 421 GPFVRECTISAK---GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVA 480
           GPFVRECTISAK   GGKKNREDASGAASPNPCYRCGEDGHFSRECPS TKGSKRNIEVA
Sbjct: 421 GPFVRECTISAKRAQGGKKNREDASGAASPNPCYRCGEDGHFSRECPSFTKGSKRNIEVA 480

Query: 481 SGTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA 540
           SG ESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA
Sbjct: 481 SGAESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLA 540

Query: 541 KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG 580
           KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG
Sbjct: 541 KAHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHG 600

[Close]

BLAST of Carg09089 vs. ExPASy TrEMBL
Match: A0A6J1IF09 (zinc finger CCHC domain-containing protein 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472161 PE=4 SV=1)

HSP 1 Score: 1040.0 bits (2688), Expect = 3.6e-300
Identity = 555/674 (82.34%), Postives = 563/674 (83.53%), Query Frame = 0


Query: 1   MGRRGKQKKFKFE--EDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLV 60
           MGRRGKQKKFKFE  EDEDELKERASKTTVVVSSDDEEANED SLKIVEKALRLRSGKLV
Sbjct: 1   MGRRGKQKKFKFEEDEDEDELKERASKTTVVVSSDDEEANEDFSLKIVEKALRLRSGKLV 60

Query: 61  RFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGS 120
           RFPDHNQVGNRE+SGNG VDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGS
Sbjct: 61  RFPDHNQVGNRERSGNGDVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGS 120

Query: 121 KKSAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSE 180
           KKSAKKRKRKVKKLETE+P VVVTEGEKI+TIP IDQVDSEEPKITEIETTPLIDQVDSE
Sbjct: 121 KKSAKKRKRKVKKLETEKPPVVVTEGEKIDTIPLIDQVDSEEPKITEIETTPLIDQVDSE 180

Query: 181 EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL 240
           EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL
Sbjct: 181 EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL 240

Query: 241 EHNARSCLK--------------------------------------------------- 300
           EHNARSCLK                                                   
Sbjct: 241 EHNARSCLKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDD 300

Query: 301 ------------------------------------------ACSRLRGEASAAVSASSC 360
                                                     ACSRLRGEASAAVSASSC
Sbjct: 301 DLKNIQCYICKKLGHLCCVNSTSDTSVDISCYKCGQAGHTGLACSRLRGEASAAVSASSC 360

Query: 361 YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAG 420
           YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFAREC SSAKVDKKAG
Sbjct: 361 YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECISSAKVDKKAG 420

Query: 421 PFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTE 480
           PFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASG E
Sbjct: 421 PFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGAE 480

Query: 481 STNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAKAHS 540
           STNSCYRCGGEGHFARECTSSTKG K+ R+LSN KSRSKT E YHMGSKSAPHNLAKAHS
Sbjct: 481 STNSCYRCGGEGHFARECTSSTKGCKKKRDLSNPKSRSKT-EMYHMGSKSAPHNLAKAHS 540

Query: 541 KKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTE 580
           KKKKINY+EKYTNLPRKSGQKGRWMMEDPG RNFFNGTSMNNNWNSPVTPSRWDHGYYTE
Sbjct: 541 KKKKINYEEKYTNLPRKSGQKGRWMMEDPGSRNFFNGTSMNNNWNSPVTPSRWDHGYYTE 600

[Close]

BLAST of Carg09089 vs. ExPASy TrEMBL
Match: A0A6J1IF04 (uncharacterized protein LOC111472161 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472161 PE=4 SV=1)

HSP 1 Score: 1034.6 bits (2674), Expect = 1.5e-298
Identity = 555/677 (81.98%), Postives = 563/677 (83.16%), Query Frame = 0


Query: 1   MGRRGKQKKFKFE--EDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLV 60
           MGRRGKQKKFKFE  EDEDELKERASKTTVVVSSDDEEANED SLKIVEKALRLRSGKLV
Sbjct: 1   MGRRGKQKKFKFEEDEDEDELKERASKTTVVVSSDDEEANEDFSLKIVEKALRLRSGKLV 60

Query: 61  RFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGS 120
           RFPDHNQVGNRE+SGNG VDGVGVVEVSSSPLGDA+TGA TSGT VDVIAAASEARELGS
Sbjct: 61  RFPDHNQVGNRERSGNGDVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGS 120

Query: 121 KKSAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSE 180
           KKSAKKRKRKVKKLETE+P VVVTEGEKI+TIP IDQVDSEEPKITEIETTPLIDQVDSE
Sbjct: 121 KKSAKKRKRKVKKLETEKPPVVVTEGEKIDTIPLIDQVDSEEPKITEIETTPLIDQVDSE 180

Query: 181 EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL 240
           EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL
Sbjct: 181 EPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSL 240

Query: 241 EHNARSCLK--------------------------------------------------- 300
           EHNARSCLK                                                   
Sbjct: 241 EHNARSCLKARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDD 300

Query: 301 ------------------------------------------ACSRLRGEASAAVSASSC 360
                                                     ACSRLRGEASAAVSASSC
Sbjct: 301 DLKNIQCYICKKLGHLCCVNSTSDTSVDISCYKCGQAGHTGLACSRLRGEASAAVSASSC 360

Query: 361 YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAG 420
           YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFAREC SSAKVDKKAG
Sbjct: 361 YRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECISSAKVDKKAG 420

Query: 421 PFVRECTISAK---GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVAS 480
           PFVRECTISAK   GGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVAS
Sbjct: 421 PFVRECTISAKLAQGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVAS 480

Query: 481 GTESTNSCYRCGGEGHFARECTSSTKGGKRNRELSNHKSRSKTEETYHMGSKSAPHNLAK 540
           G ESTNSCYRCGGEGHFARECTSSTKG K+ R+LSN KSRSKT E YHMGSKSAPHNLAK
Sbjct: 481 GAESTNSCYRCGGEGHFARECTSSTKGCKKKRDLSNPKSRSKT-EMYHMGSKSAPHNLAK 540

Query: 541 AHSKKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGY 580
           AHSKKKKINY+EKYTNLPRKSGQKGRWMMEDPG RNFFNGTSMNNNWNSPVTPSRWDHGY
Sbjct: 541 AHSKKKKINYEEKYTNLPRKSGQKGRWMMEDPGSRNFFNGTSMNNNWNSPVTPSRWDHGY 600

[Close]

BLAST of Carg09089 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-57
Identity = 198/618 (32.04%), Postives = 279/618 (45.15%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVV---VSSDDEEANEDLSLKIVEKALRLRSGKL 60
           M R+ K +KF F++ EDE +E     T V      DD+EANEDLSLKI+EKAL  R    
Sbjct: 1   MPRQNKDEKFVFDDGEDEDREDPVAITEVDNGEEEDDDEANEDLSLKILEKALSRR---- 60

Query: 61  VRFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELG 120
                   VGN+  S           ++SS            SG +  V+    +++   
Sbjct: 61  -------DVGNKLDS-----------DLSSD-----------SGVVSTVMVNGVKSK--- 120

Query: 121 SKKSAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDS 180
            KKS   +K K  KLE +    +V   +  E +  ++++   E +  E+E         S
Sbjct: 121 VKKSESSKKMKRNKLEADHEIPIVWNDQDEEKV--VEEIVKGEGEDDEVER--------S 180

Query: 181 EEPNITDTTNNNVFRKLLRGPRYFDPPDS-WGACYNCGEEGHNAVSC-TSAKRKKPCFVC 240
           +EP   +T +N V +KLLRG RYFDPPD+ W +CY+CGE+GH + +C T  KR+KPCF+C
Sbjct: 181 DEPKTEETASNLVLKKLLRGARYFDPPDAGWVSCYSCGEQGHTSFNCPTPTKRRKPCFIC 240

Query: 241 GSLEHNARSCLKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKNR------ 300
           GSLEH A+ C K                 CY C + GH A++C    K G K        
Sbjct: 241 GSLEHGAKQCSK--------------GHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCG 300

Query: 301 -----------EEASGAASPSPCYRCGEEGH-----------FARECTSSAKVDKKAGPF 360
                      E +        CY C   GH           +A  C    ++       
Sbjct: 301 DFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLAC 360

Query: 361 VRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTEST 420
            R    S +      E    +   + CYRCGE+GHF+RECP+S+     +I  + G ES 
Sbjct: 361 GRHYEESNENDSATPERLFNSREASECYRCGEEGHFARECPNSS-----SISTSHGRESQ 420

Query: 421 NSCYRCGGEGHFARECTSSTKGGKRNRELS--NHKSRSKTEETYHMGSKSAPHNLAKAHS 480
             CYRC G GHFAREC +S++  KR+RE S  +HKSR K +E     S     N      
Sbjct: 421 TLCYRCNGSGHFARECPNSSQVSKRDRETSTTSHKSRKKNKENSEHDSTPHESNGKTKKK 480

Query: 481 KKKKINYDEKYTNLPRKSGQKGRWMMEDPGPRNFFNGTSMNNNWNSPVTPSRWDHGYYTE 540
           KKKK + +E+    PRK   +G W+ E+P   +F  G        SP+TPS ++    T 
Sbjct: 481 KKKKTHKEEQPQTSPRKRKHRGGWITEEPEEESFQRGKMRRP--KSPITPSGYNRSPSTH 540

Query: 541 YSGHYASPQF----------SGRYASPPRSSGYYASPQSLTRERTLHPGTPLSFQSSIAP 574
              +Y SP+F          S R+ S P  S +  S Q     + LH            P
Sbjct: 541 IGHNYRSPKFNSGGHYPGSQSSRHHSGPSPSRWQPSHQHHHHHQHLHHHHQNHSYEPAPP 550

[Close]

BLAST of Carg09089 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 110.2 bits (274), Expect = 5.8e-24
Identity = 72/210 (34.29%), Postives = 95/210 (45.24%), Query Frame = 0


Query: 210 CYNCGEEGHNAVSC----------TSAKRKKPCFVCGSLEHNARSCLKACSRLRGEASAA 269
           CYNCGE GH +  C            ++  + C+ CG   H AR C  A +   G+   A
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGN---GDQRGA 161

Query: 270 VSASS--CYRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSS 329
               +  CY CG+ GH AR+CT  + G    R    G      CY CG+ GHFAR+CT  
Sbjct: 162 TKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKG--GNDGCYTCGDVGHFARDCTQK 221

Query: 330 AKVD--KKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSK 389
                 +  G     C      G   R+ A+       CY+CG  GH +R+C     G  
Sbjct: 222 VAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSG-- 281

Query: 390 RNIEVASGTESTNSCYRCGGEGHFARECTS 406
                  G  + N+CY+CG EGHFAREC+S
Sbjct: 282 -------GGGNDNACYKCGKEGHFARECSS 297

[Close]

BLAST of Carg09089 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 93.2 bits (230), Expect = 7.4e-19
Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 259 AVSASSCYRCGEEGHFARECTSSAKGGKKNREEASGAASPSPCYRCGEEGHFARECTSSA 318
           A + + CY+CG+EGH+AR+CT  +  G      A+G      C++CG+ GH++R+CT+ +
Sbjct: 233 AKTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAG-----DCFKCGKPGHWSRDCTAQS 292

Query: 319 KVDKKAGPFVRECTISAKGGKKNREDASGAASPNPCYRCGEDGHFSRECPSSTKGSKRNI 378
              K             + G+     +SG      CY+CG+ GH+SR+C   +   +   
Sbjct: 293 GNPK------------YEPGQMKSSSSSG-----ECYKCGKQGHWSRDCTGQSSNQQFQS 352

Query: 379 EVASGTESTNSCYRCGGEGHFARECTS----STKGGKRNRE 416
             A  T ST  CY+CG  GH++R+CTS    +   GKR R+
Sbjct: 353 GQAKSTSSTGDCYKCGKAGHWSRDCTSPAQTTNTPGKRQRQ 371

[Close]

BLAST of Carg09089 vs. TAIR 10
Match: AT3G43490.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-16
Identity = 79/249 (31.73%), Postives = 113/249 (45.38%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           M  + K   F F++ ED            V+  D+EANEDL LKI+EKA   R+      
Sbjct: 1   MPPKRKDINFLFDDGED-----------TVAIIDDEANEDLRLKILEKAFSRRN------ 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDAETGARTSGTIVDVIAAASEARELGSKK 120
                V N+  S           ++S  P           G +  V+    ++ E+ + K
Sbjct: 61  -----VDNKLDS-----------DLSFDP-----------GVVSTVMVNGGKSEEVKNSK 120

Query: 121 SAKKRKRKVKKLETEEPHVVVTEGEKIETIPSIDQVDSEEPKITEIETTPLIDQVDSEEP 180
           S KK KR     + E  + +VT          +++ D +           +++ V   E 
Sbjct: 121 SNKKMKRN----KLEAANEIVTH--------CVERQDEDN----------MVEDVVRGEE 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDS-WGACYNCGEEGHNAVSC-TSAKRKKPCFVCGSL 240
              +TT+N+V  KLLRG RYFDP D+ W  CY+CGE+ H  VSC T    +K CF+C SL
Sbjct: 181 EDGETTSNSVMTKLLRGARYFDPLDAGWVTCYSCGEKDHITVSCPTLTNCRKSCFICASL 183

Query: 241 EHNARSCLK 248
           EH AR C K
Sbjct: 241 EHGARQCTK 183

[Close]

BLAST of Carg09089 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 84.3 bits (207), Expect = 3.4e-16
Identity = 61/182 (33.52%), Postives = 78/182 (42.86%), Query Frame = 0


Query: 232 CFVCGSLEHNARSC---LKACSRLRGEASAAVSASSCYRCGEEGHFARECTSSAKGGKKN 291
           CF CG + H A+ C       S   G    +     CY CG+ GHFAR+C  S  G    
Sbjct: 96  CFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGG---- 155

Query: 292 REEASGAASPSPCYRCGEEGHFARECTSSAKVDKKAGPFVRECTISAKGGKKNREDASGA 351
                G     PCY CGE GH A++C   +  ++  G           GG+ +  D    
Sbjct: 156 -NSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGG----------GGGRGSGGDG--- 215

Query: 352 ASPNPCYRCGEDGHFSRECPSSTKGSKRNIEVASGTESTNSCYRCGGEGHFARECTSSTK 411
                CY CG  GHF+R+C  +  G+        G  ST  CY CGG GH A+ CTS   
Sbjct: 216 -----CYMCGGVGHFARDCRQNGGGN------VGGGGST--CYTCGGVGHIAKVCTSKIP 246

The following BLAST results are available for this feature:

BLAST of Carg09089 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021663.1	0.0e+00	100.00	Cold shock protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6587697.1	0.0e+00	86.16	DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022933990.1	8.9e-310	84.15	uncharacterized protein LOC111441232 isoform X3 [Cucurbita moschata]	[more]
XP_022933989.1	8.9e-310	84.15	uncharacterized protein LOC111441232 isoform X2 [Cucurbita moschata]	[more]
XP_022933987.1	4.4e-308	83.78	uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata] >XP_0229339...	[more]

BLAST of Carg09089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04832	6.7e-25	36.02	DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1	[more]
O65639	8.2e-23	34.29	Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1	[more]
Q94C69	4.8e-15	33.52	Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P...	[more]
Q3T0Q6	4.1e-14	31.36	Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1	[more]
O42395	1.2e-13	31.89	Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1	[more]

BLAST of Carg09089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1A8	4.3e-310	84.15	uncharacterized protein LOC111441232 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F6D8	4.3e-310	84.15	uncharacterized protein LOC111441232 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F6E2	2.1e-308	83.78	uncharacterized protein LOC111441232 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IF09	3.6e-300	82.34	zinc finger CCHC domain-containing protein 7-like isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1IF04	1.5e-298	81.98	uncharacterized protein LOC111472161 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg09089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43590.1	1.8e-57	32.04	zinc knuckle (CCHC-type) family protein	[more]
AT4G36020.1	5.8e-24	34.29	cold shock domain protein 1	[more]
AT3G42860.1	7.4e-19	33.54	zinc knuckle (CCHC-type) family protein	[more]
AT3G43490.1	2.6e-16	31.73	Zinc knuckle (CCHC-type) family protein	[more]
AT2G17870.1	3.4e-16	33.52	cold shock domain protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 389..405 e-value: 2.7E-5 score: 33.6 coord: 209..225 e-value: 0.0019 score: 27.5 coord: 300..316 e-value: 7.4E-6 score: 35.5 coord: 264..280 e-value: 8.1E-6 score: 35.3 coord: 231..247 e-value: 0.18 score: 15.8 coord: 353..369 e-value: 2.6E-5 score: 33.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 353..369 e-value: 6.6E-7 score: 29.1 coord: 209..225 e-value: 3.4E-4 score: 20.6 coord: 389..405 e-value: 8.8E-7 score: 28.7 coord: 300..316 e-value: 7.5E-8 score: 32.1 coord: 264..280 e-value: 1.1E-7 score: 31.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 265..280 score: 11.086722
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 390..405 score: 10.608721
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 301..316 score: 11.086722
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 210..225 score: 9.850513
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 354..369 score: 11.317481
None	No IPR available	GENE3D	4.10.60.10		coord: 295..346 e-value: 4.0E-6 score: 29.0
None	No IPR available	GENE3D	4.10.60.10		coord: 384..415 e-value: 9.0E-7 score: 30.4 coord: 347..377 e-value: 3.7E-7 score: 31.7 coord: 257..292 e-value: 3.3E-7 score: 31.8
None	No IPR available	GENE3D	4.10.60.10		coord: 201..248 e-value: 2.4E-10 score: 42.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..97
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 337..380
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 247..291
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 381..576
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 337..380
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 287..325
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 247..291
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 381..576
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 287..325
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 203..247
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 344..406
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 257..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09089-RA	Carg09089-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding