Carg08854 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08854
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GTPase
Location	Carg_Chr02: 9116178 .. 9120127 (+)
RNA-Seq Expression	Carg08854
Synteny	Carg08854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGTGGGAGATTACATTGGCAACAGCTTATTTCTTGGGGCTAAAGCGAACGTTTAAGCTCGCTATGAAGATTCAGAGACGCCTTGTTTCCCCTAAGCACCCTCGGATTCGTCAATTTCTGCGCGGGTATTTTTCCTCTCTCTCTTGTTCATCGTATTCTCTTAATCTGAACCCTTCTAAACGTGTTCGTGATTGTCCAATTGAACGCAATAGATTTCTACGTATCTTCTTTTATTCCTCGAGTCTGTAGAGTTTCAATTGAAGCAATTATTTATTCATTTCTGCAATAAATGTTGGGAGCTTGTTTGAGGAAGTAAAAAATTGATCCTAAATGTTGGAATCAAGTAATTAGCGATAGTTCAAGATACTGATTGGATTAATATATGATGGACATGCCACTGTCTAATATCGACGAGGAAGCTAATCAACAACTTTTGGTTGAAAATTTGGAAGTGGAGGATATATGTTACATTGTTAAAGATTTCTTTAACTACTGATCTGGAAGTTCGGATACTTATTCACTTACAAAGGATACAGATTTTTTACATATTCTTACCCAAATTTTCTACATTATTTACCGACTCCCGATCCCTTGTGCTAAGAAGCTTCTATGGTGAACTTTTTTTTAAAAAAAAATTATTAGTTTTAAGCAGATTTTGGGTTTTACATGCTTCATTTTCCACCGTTGATGCTCCATCGTTGTGCTTTTCACACGTATTTTGTTACAGAGTCGAGGCCTCCACATCTGGTTAAACACAATCTGGTGGGAATGGTTGATGAACTAATCATTCTTCAAATGCTTTTTTCTAGTTACTGGATTTAGGCCTTTACATTTCCTTAATTGCATTCTGGTGGAATAGTTGATGAACTTAATTATTGGCTTATGTGGAAGATATACATTATCTGAGATGTGCACTTCTTCATGTGGGCCTTCATTTCCTTCGTAGAGTGGAGACAATAGTTTTGGGCAACTAAGTCAGTGAACTTTCAACCTGATAACGCTTCATACCTGACATATCATGTTAGGAACACTAATGCGTGGAAAAAATAGGCGAGTAGGGACTCTGCAGTACTCTTCATGGCTCTGTCTAATAGGCAATAGGCTTGTGATCAGGTAGTGGTCTTCTTTTTCTTTTGATAAATCGGTTATCGAGGTCCCCCTCCTAACATTATTCTCATGACTCTCCTCCAATAAGCTTTTTGGGAGGTTCTGTACATCCCTAAGCCACCTCCAGGAGACTAAATATTTTAAGTTGGTAAGCTTCCAACCTAAAGGGCTTGATTCCCAAATCTTAGAGGGTACATCCAAACACGAGGCCTTGCCACAAGGGCACCATTTTGTGGTGGTAGTGGTCTTCTTTTCTTTCAAAAGTTTCTAATGATAGAAATAATTCAATAGGTCTTCAAATCGTTCATTTGAAAAAATTGAAATAATTCTTATATGAATGATCATGATACTTCCCAAAATTCGAAGCATTGGTTTATACATTCTTTTTAGTCTCGACTCTAGGAATAATTTTTTTCGCTATCTTTTTTCGCGAACGGTCAAAAGTTCCAACTAAAAAGGCGAAATGATTTCTCATTATCTTAATTGAATTACTGACATTAGTCTTTGGAGAGGGCTATCTCTCTCCCAAGTCTCACAGTGGTCACTCCACTAAAATGATCCACACCTTCTAAGGTCTCCACTCCTGTTTATAACCAAGGCACCCCTAATATTAAACTTTGTGCCCCTTACTAGTATACTACTAATCCCTCGCATATAACCCAAAGCATACCATACTAGTACTCTGGCAGTTTTCTAATGATAAGTTTGTTATTTGAGACAATATCTAGAATATGGAACAAATGGCTGCAATCAAACTGAATATTCCATTTTAGGTGATACAATGCCAAGCGTTGCACTTATACCAATAATTTTTCTTGTCCTTAAATAGGTCTGCTACATGACAATTTCTATTTGTATTACTCAATTGCCACAAAACTTGCTAGCAGATGTAGAGAAATGCTTTTGATATGCCCACTTTCTTTTGGATGCTATACAGCAGATTGCGTCAAATGCAGATTAGCTATTCGATGTGCATTTGATAAGCGTGTCAATGGCTACTATCTTAAAGGTTTCTCAAGAACTTTGATTTCATTAACATTTTAGATTTTACATCTTCGTTGTTATGGTGATATCAGTAATATGGCATGATTTCTTTGTAGTATGATCTATTTTACAAGTATACCGAGTATACAATGTTCTCAAAGGCTTCCTCTTTCTAGAGTTTGTGCACCGAGCCTCTTATAGTAACTAGAAGGACAATATCATCTTATCGTCTATTCTTTAGAATACATTATCCCATATTATCTTATGGAGTACTACTATGACATGAGTTAAGGTAATTCAAGCCTTACTACATTTACTATCATGGCTTACGGAAAAAAAAAATTTAACAAGTAGGTCAACCCTATTAGTGTTAAGAATCTTCATTGAAGTATGTGGCAATTGAAGGATATGATTTTTTATATTTTATTTCTTTACAATAACTCCTCAAGGCTGATGTCTTGTGTCTTTTAGGAAAAAGCCTTGAGATGACCTTTAACCTTTTATATATAGTAGCATTGCAGTGAAGTTTAATTGCCAGGGCTATGTAGCTCCTCTGTTCTTCATTTTTCTCTATTTATTTTATTTTAACTATGGAATGCGAATACTTCAAGATTTATCCCTCTATTCGCATGAAATCATCCTATTTTCATGTGAAATTTACACACATAATGACCTAGTATTGTTAGTAATCATATGATATTCTTCAACTTCATGATGAGCTTCAATGGCCCAAGTTGCAGTAGTAAAGATCTAGTTGTTTCTGGAACCTATGGCTTGATATTCTAAATTTTCTACCCCCAGTTCTTCGGTTGATTCTTGTCAAGTTATCAAAATTCATGGAGAACGCCCAAAACCTTGAAGCATGGGGATTGTACTGGCTTCTCGATGAACTCACCATAGTTCCATAACTGCAGAACTACTAGTAATATGTTATTGCTGCTAGTCTGTAGTTGCTGTTCTTTAACTGCTGGAAAGTACTTTTTTACTTAATGCAGACGTACACGCGCCATATTTGATGTTACCGTAAAAGTTCACCAGAGAATTCAGCATCGAAACATAGAAGTTGGTAATCTTGGTAGCTGGATTTCACGAGGGCTTAATCGAATGAAACCATCTACTGAGATTCATGAACCTCCAAGGGGGCCTATGAAATGTATGAAAATGGTCAAGCAGGCTTCCAGCTCCTACTTGAAACACCGGCCCAGCCCTCGAGCGGTGATTAGTCAGAAATTCGATCAATATATGTCAATTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCATGAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGCCATTTGTGGCTCTGAAGCATTGAAAATGAATTACAGAACAGGAGGTTTCAACAACGTTATTAGAGAAGATATTATGCAGTGGATGCTCCGAAATTAGAAGAGAGAATGTTTTCTAGTTGCCCTCTCCTTGGAGATTACAATATTTGGCCGACAATACAGTCTTTAGTCAAGTGTTTAGCTTCCAATCTTAGATTGTTCCTTCTCTTCTTGATGTAAAATCTTTCTAACATGTTCCTAGGGAAGTTGGAAATCATGTCTATGCGCATGAATAAATTAGATAGCTAATCCCTAGTATGAAAGAGACCTCTTTGAATCGACATTTTAAGTGCTTAAAAACGCTTTAATACTTTAGAACTCTTAAAAAGTCGTTCCAATAAGTCTATACCATAATTACCAAAATGTCCACTTGAAAGTTCATTGAATATACTTCATTTAAGCTGGGTATTGGCTCTGTTTCGTGTCAATAATTTTAATTCATCACTTTGTAAGCTTATT

mRNA sequence

ATGGTGTTGTGGGAGATTACATTGGCAACAGCTTATTTCTTGGGGCTAAAGCGAACGTTTAAGCTCGCTATGAAGATTCAGAGACGCCTTGTTTCCCCTAAGCACCCTCGGATTCGTCAATTTCTGCGCGGACGTACACGCGCCATATTTGATGTTACCGTAAAAGTTCACCAGAGAATTCAGCATCGAAACATAGAAGTTGGTAATCTTGGTAGCTGGATTTCACGAGGGCTTAATCGAATGAAACCATCTACTGAGATTCATGAACCTCCAAGGGGGCCTATGAAATGTATGAAAATGGTCAAGCAGGCTTCCAGCTCCTACTTGAAACACCGGCCCAGCCCTCGAGCGGTGATTAGTCAGAAATTCGATCAATATATGTCAATTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCATGAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGCCATTTGTGGCTCTGAAGCATTGAAAATGAATTACAGAACAGGAGGTTTCAACAACGTTATTAGAGAAGATATTATGCAGTGGATGCTCCGAAATTAGAAGAGAGAATGTTTTCTAGTTGCCCTCTCCTTGGAGATTACAATATTTGGCCGACAATACAGTCTTTAGTCAAGTGTTTAGCTTCCAATCTTAGATTGTTCCTTCTCTTCTTGATGTAAAATCTTTCTAACATGTTCCTAGGGAAGTTGGAAATCATGTCTATGCGCATGAATAAATTAGATAGCTAATCCCTAGTATGAAAGAGACCTCTTTGAATCGACATTTTAAGTGCTTAAAAACGCTTTAATACTTTAGAACTCTTAAAAAGTCGTTCCAATAAGTCTATACCATAATTACCAAAATGTCCACTTGAAAGTTCATTGAATATACTTCATTTAAGCTGGGTATTGGCTCTGTTTCGTGTCAATAATTTTAATTCATCACTTTGTAAGCTTATT

Coding sequence (CDS)

ATGGTGTTGTGGGAGATTACATTGGCAACAGCTTATTTCTTGGGGCTAAAGCGAACGTTTAAGCTCGCTATGAAGATTCAGAGACGCCTTGTTTCCCCTAAGCACCCTCGGATTCGTCAATTTCTGCGCGGACGTACACGCGCCATATTTGATGTTACCGTAAAAGTTCACCAGAGAATTCAGCATCGAAACATAGAAGTTGGTAATCTTGGTAGCTGGATTTCACGAGGGCTTAATCGAATGAAACCATCTACTGAGATTCATGAACCTCCAAGGGGGCCTATGAAATGTATGAAAATGGTCAAGCAGGCTTCCAGCTCCTACTTGAAACACCGGCCCAGCCCTCGAGCGGTGATTAGTCAGAAATTCGATCAATATATGTCAATTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCATGAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGCCATTTGTGGCTCTGAAGCATTGAAAATGAATTACAGAACAGGAGGTTTCAACAACGTTATTAGAGAAGATATTATGCAGTGGATGCTCCGAAATTAG

Protein sequence

MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

Homology

[Close]

BLAST of Carg08854 vs. NCBI nr
Match: KAG6606267.1 (hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036208.1 hypothetical protein SDJN02_03009, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.4 bits (1030), Expect = 4.6e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120
           QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS
Sbjct: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120

Query: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180
           QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG
Sbjct: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180

Query: 181 FNNVIREDIMQWMLRN 197
           FNNVIREDIMQWMLRN
Sbjct: 181 FNNVIREDIMQWMLRN 196

[Close]

BLAST of Carg08854 vs. NCBI nr
Match: XP_023533976.1 (uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 4.3e-106
Identity = 192/196 (97.96%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFK+AMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKIAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120
           QHRNIEVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS
Sbjct: 61  QHRNIEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120

Query: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180
           QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+KMNYRTGG
Sbjct: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAMKMNYRTGG 180

Query: 181 FNNVIREDIMQWMLRN 197
           FNNVIREDIMQWMLRN
Sbjct: 181 FNNVIREDIMQWMLRN 196

[Close]

BLAST of Carg08854 vs. NCBI nr
Match: XP_022930989.1 (uncharacterized protein LOC111437317 [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120
           QHRN EVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS
Sbjct: 61  QHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120

Query: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180
           QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEA+KMNY  GG
Sbjct: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGG 180

Query: 181 FNNVIREDIMQWMLRN 197
           FNNVIREDIM+WMLRN
Sbjct: 181 FNNVIREDIMRWMLRN 196

[Close]

BLAST of Carg08854 vs. NCBI nr
Match: XP_022995481.1 (uncharacterized protein LOC111491005 [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 3.8e-102
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           QHRNIEVG NLGSWISRGLNRMK S EIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI
Sbjct: 61  QHRNIEVGKNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRT 180
           SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+  MNYR 
Sbjct: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAMTTMNYRR 180

Query: 181 GGFNNVIREDIMQWMLRN 197
           GGFNNVIREDIMQWMLRN
Sbjct: 181 GGFNNVIREDIMQWMLRN 198

[Close]

BLAST of Carg08854 vs. NCBI nr
Match: XP_022159442.1 (uncharacterized protein LOC111025863 isoform X1 [Momordica charantia])

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78
Identity = 152/197 (77.16%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +
Sbjct: 1   MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSIFDVAVKVHQNV 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           QH++IEVG N G+ I + LN+MKPS EI E   G +  MKM+KQ S+SYLKHR SPRAVI
Sbjct: 61  QHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMKMIKQVSNSYLKHRASPRAVI 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTG 180
           SQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G
Sbjct: 121 SQKFDQYMSITSSIRRWPKPFPTFAMIMRQPKPA--GTKIQYRQYSICGSEAMETNYRRG 180

Query: 181 GFNNVIREDIMQWMLRN 197
            F+ VIREDI+QWMLR+
Sbjct: 181 SFDCVIREDILQWMLRS 195

[Close]

BLAST of Carg08854 vs. ExPASy TrEMBL
Match: A0A6J1ET19 (uncharacterized protein LOC111437317 OS=Cucurbita moschata OX=3662 GN=LOC111437317 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120
           QHRN EVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS
Sbjct: 61  QHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120

Query: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180
           QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEA+KMNY  GG
Sbjct: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGG 180

Query: 181 FNNVIREDIMQWMLRN 197
           FNNVIREDIM+WMLRN
Sbjct: 181 FNNVIREDIMRWMLRN 196

[Close]

BLAST of Carg08854 vs. ExPASy TrEMBL
Match: A0A6J1K213 (uncharacterized protein LOC111491005 OS=Cucurbita maxima OX=3661 GN=LOC111491005 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI
Sbjct: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           QHRNIEVG NLGSWISRGLNRMK S EIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI
Sbjct: 61  QHRNIEVGKNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRT 180
           SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+  MNYR 
Sbjct: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAMTTMNYRR 180

Query: 181 GGFNNVIREDIMQWMLRN 197
           GGFNNVIREDIMQWMLRN
Sbjct: 181 GGFNNVIREDIMQWMLRN 198

[Close]

BLAST of Carg08854 vs. ExPASy TrEMBL
Match: A0A6J1DZV3 (uncharacterized protein LOC111025863 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025863 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78
Identity = 152/197 (77.16%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +
Sbjct: 1   MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSIFDVAVKVHQNV 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           QH++IEVG N G+ I + LN+MKPS EI E   G +  MKM+KQ S+SYLKHR SPRAVI
Sbjct: 61  QHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMKMIKQVSNSYLKHRASPRAVI 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTG 180
           SQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G
Sbjct: 121 SQKFDQYMSITSSIRRWPKPFPTFAMIMRQPKPA--GTKIQYRQYSICGSEAMETNYRRG 180

Query: 181 GFNNVIREDIMQWMLRN 197
            F+ VIREDI+QWMLR+
Sbjct: 181 SFDCVIREDILQWMLRS 195

[Close]

BLAST of Carg08854 vs. ExPASy TrEMBL
Match: A0A6J1E2E5 (uncharacterized protein LOC111025863 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025863 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.0e-68
Identity = 139/196 (70.92%), Postives = 154/196 (78.57%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +
Sbjct: 1   MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSIFDVAVKVHQNV 60

Query: 61  QHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVIS 120
           QH++IEVG                             MKM+KQ S+SYLKHR SPRAVIS
Sbjct: 61  QHQDIEVG-----------------------------MKMIKQVSNSYLKHRASPRAVIS 120

Query: 121 QKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGG 180
           QKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G 
Sbjct: 121 QKFDQYMSITSSIRRWPKPFPTFAMIMRQPKPA--GTKIQYRQYSICGSEAMETNYRRGS 165

Query: 181 FNNVIREDIMQWMLRN 197
           F+ VIREDI+QWMLR+
Sbjct: 181 FDCVIREDILQWMLRS 165

[Close]

BLAST of Carg08854 vs. ExPASy TrEMBL
Match: A0A6J1HFJ9 (uncharacterized protein LOC111463851 OS=Cucurbita moschata OX=3662 GN=LOC111463851 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 134/197 (68.02%), Postives = 156/197 (79.19%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWEI LATAYFLGLKRTFKL +K QRRLVSP HPRIR+FL  RTRAIFDVT+K H+ I
Sbjct: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           +HR+I+VG N+ SWIS+ LNR KPS  IH+ P G    MKM+KQ S+SY+KHR S RA I
Sbjct: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHRASTRAAI 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTG 180
            QK D+Y+S TSSVH WPK FPTIAMIMRQ KPA  GTM Q+RQ++IC SE +K NYR G
Sbjct: 121 GQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPA--GTMNQHRQFSICSSEGMKTNYRRG 180

Query: 181 GFNNVIREDIMQWMLRN 197
            F + IR+DI QWM+RN
Sbjct: 181 RFEHGIRDDIKQWMIRN 195

[Close]

BLAST of Carg08854 vs. TAIR 10
Match: AT1G32260.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 174.9 bits (442), Expect = 6.5e-44
Identity = 100/202 (49.50%), Postives = 134/202 (66.34%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MV WEITL TAYFLGL+RT++LA+KIQRRLV+PKHP+IRQFL  RTR IFDV + VH+ I
Sbjct: 1   MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISVHKNI 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           Q R+IEVG NLG+WI R L++MKP+ +I   P  P      + +A       RP      
Sbjct: 61  QERDIEVGRNLGNWILRWLDKMKPAAQIRTRPELPHNSNSNMDKAKRLTELSRPKSHTNT 120

Query: 121 SQ-----KFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA--L 180
           +Q     + D+++  TS  H   KPFP+++M+++ P+P GT T  QYR Y   G  A  +
Sbjct: 121 TQTPQNRESDRHL-FTSLKHFRHKPFPSVSMMIQPPRPNGTTT--QYRHYYSGGLAASLI 180

Query: 181 KMNYRT-GGFNNVIREDIMQWM 194
           + +Y T GGFN V+R+DI+QWM
Sbjct: 181 QPSYVTGGGFNGVVRKDILQWM 199

[Close]

BLAST of Carg08854 vs. TAIR 10
Match: AT2G35480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast hits to 47 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 89/196 (45.41%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 1   MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRI 60
           MVLWE+ L TAYFLG++RT++LA+K QRRLVSPKHPRIR F+  RT  IFD+ ++VH+ I
Sbjct: 1   MVLWELALGTAYFLGIRRTYRLALKTQRRLVSPKHPRIRDFMHRRTYQIFDMALRVHKNI 60

Query: 61  QHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLKHRPSPRAVI 120
           Q R++ +G NLG+WI RGL+RMKPS ++  P        K  +   S+ LK   + +   
Sbjct: 61  QQRDMVIGRNLGNWILRGLDRMKPSAQVLLPKNTEPSIDKAKRVLQSTRLKPHVNTQTPQ 120

Query: 121 SQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTG 180
           +++ D+  ++  S+  +   +P  +M+M +P P  TGT  QYR Y++  S  +K  Y  G
Sbjct: 121 NREVDR--NLFMSLRNFRSKYPIASMMMIKP-PRSTGTTTQYRPYSVGESSLIKPIYARG 180

Query: 181 GFNNVIREDIMQWMLR 196
           GFN+VIR+DI+QWM++
Sbjct: 181 GFNSVIRKDILQWMVQ 193

The following BLAST results are available for this feature:

BLAST of Carg08854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606267.1	4.6e-108	100.00	hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533976.1	4.3e-106	97.96	uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo]	[more]
XP_022930989.1	4.4e-103	95.92	uncharacterized protein LOC111437317 [Cucurbita moschata]	[more]
XP_022995481.1	3.8e-102	96.46	uncharacterized protein LOC111491005 [Cucurbita maxima]	[more]
XP_022159442.1	6.5e-78	77.16	uncharacterized protein LOC111025863 isoform X1 [Momordica charantia]	[more]

BLAST of Carg08854 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET19	2.2e-103	95.92	uncharacterized protein LOC111437317 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K213	1.8e-102	96.46	uncharacterized protein LOC111491005 OS=Cucurbita maxima OX=3661 GN=LOC111491005...	[more]
A0A6J1DZV3	3.1e-78	77.16	uncharacterized protein LOC111025863 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E2E5	1.0e-68	70.92	uncharacterized protein LOC111025863 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HFJ9	1.1e-67	68.02	uncharacterized protein LOC111463851 OS=Cucurbita moschata OX=3662 GN=LOC1114638...	[more]

BLAST of Carg08854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32260.1	6.5e-44	49.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35480.1	1.2e-42	45.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35998	FAMILY NOT NAMED	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08854-RA	Carg08854-RA	mRNA