Carg08847 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08847
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 12-like isoform X2
Location	Carg_Chr02: 9095410 .. 9097897 (-)
RNA-Seq Expression	Carg08847
Synteny	Carg08847

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATAATGGGGGAAACGTAGTCCATGTGATTCCCGGGACGAGCAGCGAGAATTGGCCTGGCGAAGTTTGGGCCACCGAAGACGAATACAGAGCTTGGAATAATGGCGTTGATGGGTGTGTCGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGGTCCGGCAGCGAACCCCCAAATAAGAAATCGAGAAGCTCCCAGGATGTTACGTCCTCGAACCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACCTGCCCTTACATCACCAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGACCTCCACCGAATTGGCAGGTATTAGGTTTGGTTCTTAGTTAATATTTAATCTTTGTTATGTTCAATGTTTAATTGTTAGCTTGATAGCTGAATTTTCTTGTTGGGTAGTGTACTTCGTAGTTCGTTCCTTAGCTTAGAGTTAAGCCATTTAATTACTGCTATACATTGGTATTTATGCTTCCTTTTGTACACAGAATTGGATGACTTGAGTATCATGAGTTCCTCATTGCATTGAGTATTGTTAGCAGGAAATTGTGGCCGCCCATGAGGAAGAAAAGGCGGTATTTTTAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCCGAGTCGCAGAGGTCATATAAAGGACGACATTGCAAGAAGTTTTACACCGAGGAGGGGTGTCCATATGGGGATGGCTGTACATTTCTTCACGACGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCCTGGGTCCTGGTGGCTACAGTGGTGGCGGATCAGGAAATGGATCAAACACTAAGCCTTCGAATTGGAAAACAAGGATATGTAACAAGTGGGAGTTGACGGGATATTGTCCATTCGGAAACAAATGTCATTTTGCTCATGGTGCTGCTGGTATGTTTTCTCATTCCTTCGTTAATGAAATTGTTGTACATGGGCCTGCACTATACAGAAAAATTCTGCATCAATTTCAACCCTTCTTTTGGTTGTTAGTATAGTTTCCATTATCTGTTTAATCGCTTAATCTGTCAGCACTCTTAAGAATCCCTGGGTTAAGCGTTTTAATAGAAAGTGCTCTTACCATGCCCCATAGGATACATCTGCTCAATCTCGCTTGACTTTTGTTTTAACTTTAAAGAACAATGGTTTCATTACGAGATCCTACATTGGTTGGAGATGGGAATGAAGCATTAAGGGTGTAGAAACCTTTCTTTGGTAGATGCGTTTTAGAACTTTAAGGGAGAGCCCAAAAAGAACATTATCTACCAACGTTGGGCTTAGGTTGTTACAAATGGTATTAGAGTCAAGACACTAGATGGTGTGCCAGCGAGATGTTGGACCTCAAGAGGGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACTAGCAGATACATTTTAAAACCTTGAAAGGAAGTCTAGATGGGAAAGCCCTTACATTTTGTTTTGTATTTTCAAGTGGCTTAGATTTTAAGTCTATTCCATTTACTCTCCATTGCGATTTGGCATGCATTATTCTGTTTTGTGTTTCCACTTTCAAGACTCCAAAATCAATTGATTGCAAAGATATCTAACTAAGCTTCAATTCTTTTTTATGATTTTTCATGCTTTGTTTCTCCGAGTAATCGTCATTTATCTGAACTTTGATATAGTCATATAGGTCGAGTCAGTTAATCGAGTAGATTGAAAAACATGTAATAGTGTCTAGAGTTCTGTAGTTTTAGTGGTTTTAGACTTAATACTTCGAATTAACCACAGAATTGCACCGTTATGGTGGTGGGCTTGTGGAGACAGAAACTAGAGACTCTTCATCTGCTCCTCCTGACCAGAAGCAGGGAGTATTACCGAAAGCTCCTGGTGATACGGTGGTTGCTTCTGTTCCTTCAGTTCCTCATTCAGACGTTTATCATGTCGTGATTCCATCTCAGAGGTCAACCATTGTAATTCAAAGGTCAGGGCAGAGAACTCATCAGAAATGGAAGGGGCCCGATAAAATCAGTAGGATATATGGTGACTGGATCGACGACAATGAATAATATTATCCAAGCAATCACCAAACGTGAATAACGAGAACTTTAAGTTCCATGGTTAACAAGCATCATAATGGACTTTGTCTCTCATAAGTTGGCAGATGAAGATTCTGTTTGTTCAGGTCGAGTTTTGGTCGGTTCTTTACTTATTCTCGTTTCCAACCCGCTTCACTTCCGATCATCAAAATTTGAGGCATATGGTCTTTATCTGTTAGTAGTGTCTTTATTTCTGTTGTTACTATATGTAATCCTTCTCATTCAAAGAAAAGGGAAAATGTATGATTGTCACCACCTTCCCAGATCATCACTGAGTGATTCTTCTGTTTTCTGGGAAAGTCTTTAACCTTATTGTAATGGGAATATATGAGTTAGTTCTTC

mRNA sequence

ATGGATTATAATGGGGGAAACGTAGTCCATGTGATTCCCGGGACGAGCAGCGAGAATTGGCCTGGCGAAGTTTGGGCCACCGAAGACGAATACAGAGCTTGGAATAATGGCGTTGATGGGTGTGTCGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGGTCCGGCAGCGAACCCCCAAATAAGAAATCGAGAAGCTCCCAGGATGTTACGTCCTCGAACCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACCTGCCCTTACATCACCAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGACCTCCACCGAATTGGCAGGAAATTGTGGCCGCCCATGAGGAAGAAAAGGCGGTATTTTTAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCCGAGTCGCAGAGGTCATATAAAGGACGACATTGCAAGAAGTTTTACACCGAGGAGGGGTGTCCATATGGGGATGGCTGTACATTTCTTCACGACGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCCTGGGTCCTGGTGGCTACAGTGGTGGCGGATCAGGAAATGGATCAAACACTAAGCCTTCGAATTGGAAAACAAGGATATGTAACAAGTGGGAGTTGACGGGATATTGTCCATTCGGAAACAAATGTCATTTTGCTCATGGTGCTGCTGAAACTAGAGACTCTTCATCTGCTCCTCCTGACCAGAAGCAGGGAGTATTACCGAAAGCTCCTGGTGATACGGTGGTTGCTTCTGTTCCTTCAGTTCCTCATTCAGACGTTTATCATGTCGTGATTCCATCTCAGAGGTCAACCATTGTAATTCAAAGGTCAGGGCAGAGAACTCATCAGAAATGGAAGGGGCCCGATAAAATCAGTAGGATATATGGTGACTGGATCGACGACAATGAATAATATTATCCAAGCAATCACCAAACGTGAATAACGAGAACTTTAAGTTCCATGGTTAACAAGCATCATAATGGACTTTGTCTCTCATAAGTTGGCAGATGAAGATTCTGTTTGTTCAGGTCGAGTTTTGGTCGGTTCTTTACTTATTCTCGTTTCCAACCCGCTTCACTTCCGATCATCAAAATTTGAGGCATATGGTCTTTATCTGTTAGTAGTGTCTTTATTTCTGTTGTTACTATATGTAATCCTTCTCATTCAAAGAAAAGGGAAAATGTATGATTGTCACCACCTTCCCAGATCATCACTGAGTGATTCTTCTGTTTTCTGGGAAAGTCTTTAACCTTATTGTAATGGGAATATATGAGTTAGTTCTTC

Coding sequence (CDS)

ATGGATTATAATGGGGGAAACGTAGTCCATGTGATTCCCGGGACGAGCAGCGAGAATTGGCCTGGCGAAGTTTGGGCCACCGAAGACGAATACAGAGCTTGGAATAATGGCGTTGATGGGTGTGTCGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGGTCCGGCAGCGAACCCCCAAATAAGAAATCGAGAAGCTCCCAGGATGTTACGTCCTCGAACCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACCTGCCCTTACATCACCAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGACCTCCACCGAATTGGCAGGAAATTGTGGCCGCCCATGAGGAAGAAAAGGCGGTATTTTTAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCCGAGTCGCAGAGGTCATATAAAGGACGACATTGCAAGAAGTTTTACACCGAGGAGGGGTGTCCATATGGGGATGGCTGTACATTTCTTCACGACGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCCTGGGTCCTGGTGGCTACAGTGGTGGCGGATCAGGAAATGGATCAAACACTAAGCCTTCGAATTGGAAAACAAGGATATGTAACAAGTGGGAGTTGACGGGATATTGTCCATTCGGAAACAAATGTCATTTTGCTCATGGTGCTGCTGAAACTAGAGACTCTTCATCTGCTCCTCCTGACCAGAAGCAGGGAGTATTACCGAAAGCTCCTGGTGATACGGTGGTTGCTTCTGTTCCTTCAGTTCCTCATTCAGACGTTTATCATGTCGTGATTCCATCTCAGAGGTCAACCATTGTAATTCAAAGGTCAGGGCAGAGAACTCATCAGAAATGGAAGGGGCCCGATAAAATCAGTAGGATATATGGTGACTGGATCGACGACAATGAATAA

Protein sequence

MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE

Homology

[Close]

BLAST of Carg08847 vs. NCBI nr
Match: KAG6606260.1 (Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036201.1 Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 689.5 bits (1778), Expect = 1.4e-194
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240
           GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK
Sbjct: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240

Query: 241 CHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQ 300
           CHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQ
Sbjct: 241 CHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQ 300

Query: 301 RSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           RSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 RSGQRTHQKWKGPDKISRIYGDWIDDNE 328

[Close]

BLAST of Carg08847 vs. NCBI nr
Match: XP_023533946.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 684.9 bits (1766), Expect = 3.5e-193
Identity = 328/329 (99.70%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300
           KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           QRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Carg08847 vs. NCBI nr
Match: XP_022995984.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 683.7 bits (1763), Expect = 7.7e-193
Identity = 327/329 (99.39%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300
           KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV+IPSQRSTIVI
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVMIPSQRSTIVI 300

Query: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           QRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Carg08847 vs. NCBI nr
Match: XP_023533945.1 (zinc finger CCCH domain-containing protein 12-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 680.6 bits (1755), Expect = 6.6e-192
Identity = 328/340 (96.47%), Postives = 328/340 (96.47%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240
           GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK
Sbjct: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240

Query: 241 CHFAHGAA------------ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300
           CHFAHGAA            ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV
Sbjct: 241 CHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300

Query: 301 VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 340

[Close]

BLAST of Carg08847 vs. NCBI nr
Match: XP_022930985.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 680.6 bits (1755), Expect = 6.6e-192
Identity = 327/329 (99.39%), Postives = 327/329 (99.39%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDG VDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300
           KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           QRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Carg08847 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 9.7e-106
Identity = 224/394 (56.85%), Postives = 250/394 (63.45%), Query Frame = 0


Query: 4   NGGNVVHVIPGTS--SENW-----PGEVWATEDEY-RAWNNGVDGCVDTPSNSSYDQRQS 63
           +GG+VVHVIP  +   +NW        VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRSSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+R S   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPPNWQEIVAAHEEEK---------AVFLEPREEFQIPSLGTSNFGSESQ 183
           FAH++EELRRPPPNWQEIVAAHEEE+         +V   PREEFQIPSL +S   +ES 
Sbjct: 128 FAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESG 187

Query: 184 RSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAISLGPGGY-------------- 243
           RS+KGRHCKKFYTEEGCPYG+ CTFLHDE S+NRESVAISLGPGGY              
Sbjct: 188 RSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVG 247

Query: 244 ------------SGGGSGNGSN---TKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAET 303
                        GGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAE 
Sbjct: 248 GGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 307

Query: 304 ------------RDSSSAPPDQKQGVL-PKAPGDTVVASVPSVPHS--DVYHVVIPSQR- 329
                       +D  S  PD KQ V  PK   DT     P VPH+    YH  +  QR 
Sbjct: 308 HRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRA 367

[Close]

BLAST of Carg08847 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.8e-102
Identity = 209/386 (54.15%), Postives = 246/386 (63.73%), Query Frame = 0


Query: 1   MDYNGGNVVHVIP---------GTSSENWPGEVWATEDEYRA-WNNGVDGCVDTPSNSSY 60
           MDY   N +H+IP           +++     +WATED+Y + WN    G          
Sbjct: 1   MDYT--NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGG---------- 60

Query: 61  DQRQSQSRSGSE--PPNKKSR---SSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYIT 120
                 SR+GSE  PP KKSR     +   ++++S+AIGKMFFKTKLCCKFRAGTCPY+T
Sbjct: 61  ---GGSSRAGSEQPPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVT 120

Query: 121 NCNFAHSIEELRRPPPNWQEIVAAHEEEKAVFLEPREEFQIPSLGTS------------N 180
           NCNFAH +EELR+PPPNWQEIVAAHEE      E REE QIP + +S             
Sbjct: 121 NCNFAHGMEELRKPPPNWQEIVAAHEEA----TEAREEHQIPIMTSSGPTAGGDAGCGGG 180

Query: 181 FGSESQRSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAISLGP--GGYSGGGS- 240
            G  S R+YKGRHCKKFYT+EGCPYGD CTFLHDEQSK RESVAISL P  GG  GGGS 
Sbjct: 181 GGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSY 240

Query: 241 --------------GNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAE------- 300
                         GNG   KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAE       
Sbjct: 241 NSAAAAAASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGG 300

Query: 301 -----TRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQRSG- 329
                +RD+++ P  ++  V  KAP +T  AS   +PH+DVYH+ + +QRSTI  QRSG 
Sbjct: 301 LVDIDSRDAAATPDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQ 360

[Close]

BLAST of Carg08847 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-43
Identity = 124/312 (39.74%), Postives = 146/312 (46.79%), Query Frame = 0


Query: 24  VWATEDEY-RAWNNGVDGCVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKA 83
           VWATED+Y R W    D                    G+E P+KK+RSS        S  
Sbjct: 34  VWATEDDYSRVWAINSD--------------------GAESPSKKTRSSS-------SSE 93

Query: 84  IGKMFFKTKLCCKFRAGTCPY-ITNCNFAHSIEELR---RPPPNWQEIVAAHEEEKAVFL 143
           IGK FFKTKLC KFRAGTCPY  ++C+FAHS EELR    PPPNWQE V           
Sbjct: 94  IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT---------- 153

Query: 144 EPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAI 203
                                                            E S+NRES A+
Sbjct: 154 -------------------------------------------------EASRNRESFAV 213

Query: 204 SLGPGGYSGGGSGNGSNT-KPSNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDSSSAP 263
           SLGP        GN + T K  NWKTRICNKW+ TGYCPFG+ CHFAHG +E        
Sbjct: 214 SLGP-------RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGL 252

Query: 264 PDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQR-SGQRTHQKWKGPDKI 323
            + +  +   A  DT          S V   V   + S+ V Q+ +G RT +KWKGPDKI
Sbjct: 274 VEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPDKI 252

Query: 324 SRIYGDWIDDNE 329
           SR+YGDWIDD E
Sbjct: 334 SRVYGDWIDDIE 252

[Close]

BLAST of Carg08847 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.1e-36
Identity = 121/366 (33.06%), Postives = 164/366 (44.81%), Query Frame = 0


Query: 28  EDEYRAWNNG--VDGCVDTPSNSSYD-------QRQSQSRSGSEPPNKKSRSSQD----- 87
           +  Y  WN    +D   +  +N   D       Q QSQ     +P  K+ R   D     
Sbjct: 14  QSPYGGWNQTQMIDSMANPMNNEQGDLHSLSESQSQSQPSQQLQPALKRPRLVDDNLFNP 73

Query: 88  ------VTSSNR-----------SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEEL 147
                  +SSN            +K    +F+KT++C KFRAGTC     CNFAH IE+L
Sbjct: 74  ASSFPQPSSSNPWMVPSLNPPPVNKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDL 133

Query: 148 RRPPPNWQEIV----AAHEEEKAVFLEPREEFQIPSLG---TSNFGSESQRSYKGRHCKK 207
           R+PP NWQEIV    A  + E+    E   E + PSL     +N+  + +   + + C+K
Sbjct: 134 RQPPSNWQEIVGPPPAGQDRERE--RERERERERPSLAPVVNNNWEDDQKIILRMKLCRK 193

Query: 208 FYTEEGCPYGDGCTFLHDEQS-------KNRESVAISLG------PGGYSGG-------G 267
           F   E CPYGD C F+H++ S       K RES  IS+G      P   +         G
Sbjct: 194 FCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQG 253

Query: 268 S-------GNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDSSSAPPDQKQ 327
           S        NG   K   WKTR+C K+++TG CPFG+KCHFAHG AE  +S      +  
Sbjct: 254 SIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAM 313

[Close]

BLAST of Carg08847 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-11
Identity = 56/175 (32.00%), Postives = 77/175 (44.00%), Query Frame = 0


Query: 163 KGRHCKKFYTEEGCPYGDGCTFLHD--------EQSKNRESVAISLGPGGYSGGGSGNGS 222
           K + C KF++  GCP+G+GC FLH          +  N    AI+  PG    G +    
Sbjct: 35  KSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDG 94

Query: 223 NTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAE-----TRDSSSAPP--DQKQGVLPK 282
              P+  KTR+CNK+     C +G+KCHFAHG  E       DSS  PP   +  G    
Sbjct: 95  PPTPT-VKTRLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAP 154

Query: 283 APGDTVVASVP-SVPHSDVYHVVIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYG 322
            P  +   S P S   S    + + +  +  +I R G  T Q       ISR+ G
Sbjct: 155 PPMPSPAMSTPASFGASATAKISVDASLAGGIIGRGGVNTKQ-------ISRVTG 201

[Close]

BLAST of Carg08847 vs. ExPASy TrEMBL
Match: A0A6J1K7G5 (zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491331 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 3.7e-193
Identity = 327/329 (99.39%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300
           KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV+IPSQRSTIVI
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVMIPSQRSTIVI 300

Query: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           QRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Carg08847 vs. ExPASy TrEMBL
Match: A0A6J1EYA4 (zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437313 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.2e-192
Identity = 327/329 (99.39%), Postives = 327/329 (99.39%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDG VDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300
           KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           QRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Carg08847 vs. ExPASy TrEMBL
Match: A0A6J1K9J7 (zinc finger CCCH domain-containing protein 12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491331 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 7.1e-192
Identity = 327/340 (96.18%), Postives = 328/340 (96.47%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240
           GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK
Sbjct: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240

Query: 241 CHFAHGAA------------ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300
           CHFAHGAA            ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV
Sbjct: 241 CHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300

Query: 301 VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           +IPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 MIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 340

[Close]

BLAST of Carg08847 vs. ExPASy TrEMBL
Match: A0A6J1ET15 (zinc finger CCCH domain-containing protein 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437313 PE=4 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 6.0e-191
Identity = 327/340 (96.18%), Postives = 327/340 (96.18%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDG VDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 PNWQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240
           GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK
Sbjct: 181 GCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNK 240

Query: 241 CHFAHGAA------------ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300
           CHFAHGAA            ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV
Sbjct: 241 CHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHV 300

Query: 301 VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 VIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 340

[Close]

BLAST of Carg08847 vs. ExPASy TrEMBL
Match: A0A6J1K0H9 (zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491331 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.7e-190
Identity = 327/341 (95.89%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60
           MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240
           DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAA------------ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYH 300
           KCHFAHGAA            ETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYH
Sbjct: 241 KCHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYH 300

Query: 301 VVIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 329
           V+IPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 VMIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 341

[Close]

BLAST of Carg08847 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 384.8 bits (987), Expect = 6.9e-107
Identity = 224/394 (56.85%), Postives = 250/394 (63.45%), Query Frame = 0


Query: 4   NGGNVVHVIPGTS--SENW-----PGEVWATEDEY-RAWNNGVDGCVDTPSNSSYDQRQS 63
           +GG+VVHVIP  +   +NW        VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRSSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+R S   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPPNWQEIVAAHEEEK---------AVFLEPREEFQIPSLGTSNFGSESQ 183
           FAH++EELRRPPPNWQEIVAAHEEE+         +V   PREEFQIPSL +S   +ES 
Sbjct: 128 FAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESG 187

Query: 184 RSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAISLGPGGY-------------- 243
           RS+KGRHCKKFYTEEGCPYG+ CTFLHDE S+NRESVAISLGPGGY              
Sbjct: 188 RSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVG 247

Query: 244 ------------SGGGSGNGSN---TKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAET 303
                        GGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAE 
Sbjct: 248 GGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 307

Query: 304 ------------RDSSSAPPDQKQGVL-PKAPGDTVVASVPSVPHS--DVYHVVIPSQR- 329
                       +D  S  PD KQ V  PK   DT     P VPH+    YH  +  QR 
Sbjct: 308 HRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRA 367

[Close]

BLAST of Carg08847 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44
Identity = 124/312 (39.74%), Postives = 146/312 (46.79%), Query Frame = 0


Query: 24  VWATEDEY-RAWNNGVDGCVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKA 83
           VWATED+Y R W    D                    G+E P+KK+RSS        S  
Sbjct: 34  VWATEDDYSRVWAINSD--------------------GAESPSKKTRSSS-------SSE 93

Query: 84  IGKMFFKTKLCCKFRAGTCPY-ITNCNFAHSIEELR---RPPPNWQEIVAAHEEEKAVFL 143
           IGK FFKTKLC KFRAGTCPY  ++C+FAHS EELR    PPPNWQE V           
Sbjct: 94  IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT---------- 153

Query: 144 EPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDGCTFLHDEQSKNRESVAI 203
                                                            E S+NRES A+
Sbjct: 154 -------------------------------------------------EASRNRESFAV 213

Query: 204 SLGPGGYSGGGSGNGSNT-KPSNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDSSSAP 263
           SLGP        GN + T K  NWKTRICNKW+ TGYCPFG+ CHFAHG +E        
Sbjct: 214 SLGP-------RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGL 252

Query: 264 PDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVIQR-SGQRTHQKWKGPDKI 323
            + +  +   A  DT          S V   V   + S+ V Q+ +G RT +KWKGPDKI
Sbjct: 274 VEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPDKI 252

Query: 324 SRIYGDWIDDNE 329
           SR+YGDWIDD E
Sbjct: 334 SRVYGDWIDDIE 252

[Close]

BLAST of Carg08847 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 152.5 bits (384), Expect = 5.8e-37
Identity = 121/366 (33.06%), Postives = 164/366 (44.81%), Query Frame = 0


Query: 28  EDEYRAWNNG--VDGCVDTPSNSSYD-------QRQSQSRSGSEPPNKKSRSSQD----- 87
           +  Y  WN    +D   +  +N   D       Q QSQ     +P  K+ R   D     
Sbjct: 14  QSPYGGWNQTQMIDSMANPMNNEQGDLHSLSESQSQSQPSQQLQPALKRPRLVDDNLFNP 73

Query: 88  ------VTSSNR-----------SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEEL 147
                  +SSN            +K    +F+KT++C KFRAGTC     CNFAH IE+L
Sbjct: 74  ASSFPQPSSSNPWMVPSLNPPPVNKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDL 133

Query: 148 RRPPPNWQEIV----AAHEEEKAVFLEPREEFQIPSLG---TSNFGSESQRSYKGRHCKK 207
           R+PP NWQEIV    A  + E+    E   E + PSL     +N+  + +   + + C+K
Sbjct: 134 RQPPSNWQEIVGPPPAGQDRERE--RERERERERPSLAPVVNNNWEDDQKIILRMKLCRK 193

Query: 208 FYTEEGCPYGDGCTFLHDEQS-------KNRESVAISLG------PGGYSGG-------G 267
           F   E CPYGD C F+H++ S       K RES  IS+G      P   +         G
Sbjct: 194 FCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQG 253

Query: 268 S-------GNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDSSSAPPDQKQ 327
           S        NG   K   WKTR+C K+++TG CPFG+KCHFAHG AE  +S      +  
Sbjct: 254 SIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAM 313

[Close]

BLAST of Carg08847 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-09
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 202 PGGYSGGGSGNGSNTKP---SNWKTRICNKWELTGYCPFGNKCHFAHGAAETRDS 254
           PGG  GGG G GS  KP   SN+KT+IC ++   G C FG++CHFAHG AE R S
Sbjct: 192 PGGGLGGGGGMGSEGKPHPGSNFKTKICERFS-KGNCTFGDRCHFAHGEAELRKS 245

[Close]

BLAST of Carg08847 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 0


Query: 222 KTRICNKWELTGYCPFGNKCHFAHGAAETR 252
           KT +CNKW+ TG CP+G+ C FAHG  E R
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253

The following BLAST results are available for this feature:

BLAST of Carg08847 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606260.1	1.4e-194	100.00	Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma s...	[more]
XP_023533946.1	3.5e-193	99.70	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita pepo su...	[more]
XP_022995984.1	7.7e-193	99.39	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita maxima]	[more]
XP_023533945.1	6.6e-192	96.47	zinc finger CCCH domain-containing protein 12-like isoform X2 [Cucurbita pepo su...	[more]
XP_022930985.1	6.6e-192	99.39	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita moschat...	[more]

BLAST of Carg08847 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQM3	9.7e-106	56.85	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	3.8e-102	54.15	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q5PP65	2.4e-43	39.74	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LT81	8.1e-36	33.06	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q7F8R0	4.1e-11	32.00	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Carg08847 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7G5	3.7e-193	99.39	zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1EYA4	3.2e-192	99.39	zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita mosch...	[more]
A0A6J1K9J7	7.1e-192	96.18	zinc finger CCCH domain-containing protein 12-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1ET15	6.0e-191	96.18	zinc finger CCCH domain-containing protein 12-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1K0H9	1.7e-190	95.89	zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita maxim...	[more]

BLAST of Carg08847 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32360.1	6.9e-107	56.85	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	1.7e-44	39.74	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G19360.1	5.8e-37	33.06	Zinc finger (CCCH-type) family protein	[more]
AT3G12130.1	6.7e-09	56.36	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G68200.1	3.1e-06	60.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 87..113 e-value: 0.0035 score: 26.6 coord: 161..188 e-value: 1.0 score: 16.2 coord: 220..247 e-value: 6.3E-9 score: 45.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 88..112 e-value: 1.8E-5 score: 24.5 coord: 221..246 e-value: 1.0E-10 score: 41.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 161..189 score: 13.431672
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 87..114 score: 12.840159
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 220..248 score: 15.22499
None	No IPR available	GENE3D	4.10.1000.10		coord: 82..118 e-value: 4.5E-11 score: 43.9 coord: 213..253 e-value: 2.4E-15 score: 57.6
None	No IPR available	GENE3D	4.10.1000.10		coord: 151..202 e-value: 1.3E-5 score: 27.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..219
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 22..325
None	No IPR available	PANTHER	PTHR12547:SF136	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 22..325
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 165..187 e-value: 9.5E-6 score: 25.3
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 85..118
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 160..189
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 217..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08847-RA	Carg08847-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding