Carg08809 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg08809
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCasein kinase II subunit beta
LocationCarg_Chr02: 8874727 .. 8878407 (+)
RNA-Seq ExpressionCarg08809
SyntenyCarg08809
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGAAGCCGCCGTCTGATCAGAGAGACTCTCGCCCTTCGTCTCTATCTAAGACCAACTGTTCTGGTGGTTCCTCTTTTCCTCTTTGTTTTTGTTTTTCGATTTTTCTTGTCTGTGTACTATTCGACTTTTTGTTAGTTTGAGCTGTTTTTTTCCTCTCTTTTTTTTGTCCTTTGTTCAGATTCGAATTGTGCTTGTTTTCTCTTGCGTGTTTTTTGGGAATTTGAGGATCCGATACAGCCCTCCTATGGTTAAGATGATTAAAAGTCTGGTTTTCTGGTGTATTGTGTTGACTGATATCAGTATTTCCAGGCCTTGTGCCTATGAAAGGATGGTTTTGATCACTACCTTTTGCAATAGCGTATACTTCCCATGTCATACTTTGTGGAACGATTGAATACTTGATTAGAATGATTGTTGTTCCTACTAATGAATTCTGACTTCGATTATTGGCTGATGAGAGGATAGGATAGGCTAAATGTTTGTGTGATTCTTTGTGACATAATTTCGTAAATATTGATATAGATGTTATTCAGGTTAGTTTCCAGTCCAACTTTTGCTGTCTTCACCATTCTTCTCTATTATGGAACTAAAACAAATAGCATATTGCTAATTACTCAATTGACAACAGACATTATTGACATGCAGAGATAAAAATTATTGAGAACTTATATGCTTTGTTTGTCTGATTGTTTGGTTTTTAAGAGTTAGATAAATTAGTGACAATATGATTTTGTTATAGTTTGTTTATGTTTAGACTTCAAATCTTTTGGTATAATTGCAGAAGAGTCTGAGACTGACAGTGAAGATTCAGATGTCAGTGGATCTGATGGTGATGATACATCTTGGATTTCGTGGTTTTGTAATCTGCGAGGAAATGAGTTCTTTTGTGAAGTGGATGATGACTATATACAAGACGACTTCAACCTTTGTGGGTTAAGCAGCCAAGTTCCATACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTAATGGTATGCTTAATGCATTCTTAAGTATTCTGAAATGTTCTGTTTAGACGCATATCAATGAAATCATTGATTGAGAAGACAAAGCCAATGCCATTACATGAGAAGAAGTATTTTTGTCTCGCAAAGATACTTTTGGCTGATAAACATTTTGAAATGACTTAATTTTGCAACAACATTGCTTGCTTGACAATGCAAGGGAAGCCATAAATAGGATACTGAAAGTCATGGAACTTTTGAAACCGAGATAGTCATTCCATCCATTTCTTTGGAGATAAAGCTCAAAGTTGGGTTTATTCTCTCTCTCTCTTTATTCGTAAATGTTTGGCCAGCTTGCGTGCACCTTGACCTATTTCATTGGCCATCTGCTTGAACCTACCATATTTGTTGCTACGGAAACTTGTAGAACATTAAATTCTAGCTTGGTGGCTCCGTGTTTTGAACTCATTCTTTCTATCTAAGCGCTTTATTTCTTTCTTTTTCATTTCTCACACTAGGTCCCATGTTGGTTTGTGCTTAATTTCTATAGCAATTATTGTTCTATCATTTGGGGCTTTTGACAGTATCCGTTTTGAAAGTTCTTCTATATAAGTATTTGGGCTTCAATCTCCCATTTAGGTGCAGTTATTACAAATCAATTTGAATGGGTGAAATGTGCAGGTGATATGTTTACAGAGGAACAGAATGAACTAATTGAATCTGCAGCTGAAATGCTTTATGGTCTAATTCATGCGAGATACATACTGACAAGTAAAGGCATGGCTGCTATGGTGAGAATCTTCTTTTGGGTTATGTTGTATTTTTATGCTTATATTGCCAGTGGTCAGAATAATCCATTATGGTCTTCGCAGCTGGACAAGTTCAAGAATTATGACTTTGGGAGATGCCCTAGAGTTTACTGCTGTGGACAACCCTGTCTTCCTGTTGGTCAATCAGATATTCCTAGAGCAAGCACCGTCAAAATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAATATCAAGGTAGTATCCTTTATTTGCATGATCATCTGTTCAACTACTTTCATGCACATTATACATTTCTTATCAATTTACTGCTACAATCATCCGGTTTCTTTTTGTGAGATCTCACATATGTTGGAGAGGAGAACGAAACACTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAACCTTGAGAGGAAGCTAAGAAGGGAAAGCCCAAAGAGGATAATATCTGCTAACGGTGGACTTGGGGCTATTACTAATAGTATCAGAGCCAGACACCGGGCGGTGTGCCAGCGAGAACGCTAACTCTCAAGGGGGTGGATTGTAAGATCCCACGTCGGTTGGAGAGAAGAACGAAGCATTCCTTATAAAGGTGTGGAAACCTCTCCCAAGTAGACGTATTTTAAAACCTCGAGGGAAAGTCCAAAAAGGAAAGCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACACTTTTTAACGAGAAATGAAACTTTTCATCGATGTGTAATAAAAAGAGACTAATACTCAAACTATACCATCTTTACATGGGAGTGAAAATGAGAACAATAAATGAAAGCAAAACACATAGAAAGTTGCAGCAGGAAGATAAAGATATTCCAACAAAAACATCTATCTTGTACAGAGAAATCAAGGTAAGACTTGGAAACTCTACAATGCAAGACTTAGAAGCATTGGTCTCCTTTGGGATTGTTTTTTTAAAATTTGTATGTCGTATTTATTTTCATTTGTTTAATAAAAGTTCAGTTTCTCACCTAAAAAAGAAAAAAAAAACATAAGACATAGAAAGAAAACACCATGAAGAAACTTCAAGACAAGCGGATTCAAATCTGTCTAACCAGGGAAGATTCTAATCATTCTAATTCCCATGGTTGTTTCTTTGAGTTTATTTAAAAATCTTGATAAACTAGATATCCTCCTTAGTTAAGGTCTAGTGGGGAGTTATTCTTGTTTCTTCAGAATCCTATAAAAAACGTACTCTACTAATTCAAGTAAAAGAACTGCCAGTTTGTGGTACCCCTATTGGTGGGGAGGATGTTATAGCGACCAGTTTGTCAGGTTGAATTTGACTAATAGGAAATGGCAATTTGTCGATTTGACACGAAAGTTACACTCTACTCGGTGTTTATTTTACGTGAAACTGAAGTTGTCGGTTTTCAGGTTTTGTAGCACATGCATTTTAAGCGTACACAATACATGTTTTGAATCACTGAATTGCATGTAAGCCTTTGTAAATGATGAGAATTCAGTTTAGATAGACAGCAGTCTTCACAAGTTTCTTTAACTCTATATAGACATTGATGGAGCTTACTTCGGAACTACATTTTCTCACCTCTTTCTGATGACATATGGACACCTTAAGCCGCAAAAAGCTATTCAGAGCTACGTTCCGAGAGTGTTTGGATTCAAGATCCACAAGCCATGAAACTGAAACTTTAAAGCTTTCACTTGGGTGAGTTCTATGCATCTCGGACATACTTTGAGAGTTAGTGTAGCTCTGCCTCCTATGAGAATACTTTGAGAATTATCTGCGTCTGAATGTTATAATGAAGCATTCGTCTACCCCTTGTGAATGGAGGTGCCAATTCTCATGATGATGGCTCCTATTTGGTGAGCTTCTTTAGGATCCCCACATCCCCCCCCCC

mRNA sequence

GGTGAAGCCGCCGTCTGATCAGAGAGACTCTCGCCCTTCGTCTCTATCTAAGACCAACTGTTCTGGTGGTTCCTCTTTTCCTCTTTGTTTTTGTTTTTCGATTTTTCTTGTCTGTGTACTATTCGACTTTTTGTTAGTTTGAGCTGTTTTTTTCCTCTCTTTTTTTTGTCCTTTGTTCAGATTCGAATTGTGCTTGTTTTCTCTTGCGTGTTTTTTGGGAATTTGAGGATCCGATACAGCCCTCCTATGGTTAAGATGATTAAAAGTCTGGTTTTCTGGTGTATTGTGTTGACTGATATCAGTATTTCCAGGCCTTGTGCCTATGAAAGGATGGTTTTGATCACTACCTTTTGCAATAGCGTATACTTCCCATGTCATACTTTGTGGAACGATTGAATACTTGATTAGAATGATTGTTGTTCCTACTAATGAATTCTGACTTCGATTATTGGCTGATGAGAGGATAGGATAGGCTAAATGTTTGTGTGATTCTTTGTGACATAATTTCGTAAATATTGATATAGATGTTATTCAGGTTAGTTTCCAGTCCAACTTTTGCTGTCTTCACCATTCTTCTCTATTATGGAACTAAAACAAATAGCATATTGCTAATTACTCAATTGACAACAGACATTATTGACATGCAGAGATAAAAATTATTGAGAACTTATATGCTTTGTTTGTCTGATTGTTTGGTTTTTAAGAGTTAGATAAATTAGTGACAATATGATTTTGTTATAGTTTGTTTATGTTTAGACTTCAAATCTTTTGGTATAATTGCAGAAGAGTCTGAGACTGACAGTGAAGATTCAGATGTCAGTGGATCTGATGGTGATGATACATCTTGGATTTCGTGGTTTTGTAATCTGCGAGGAAATGAGTTCTTTTGTGAAGTGGATGATGACTATATACAAGACGACTTCAACCTTTGTGGGTTAAGCAGCCAAGTTCCATACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTAATGGTGATATGTTTACAGAGGAACAGAATGAACTAATTGAATCTGCAGCTGAAATGCTTTATGGTCTAATTCATGCGAGATACATACTGACAAGTAAAGGCATGGCTGCTATGCTGGACAAGTTCAAGAATTATGACTTTGGGAGATGCCCTAGAGTTTACTGCTGTGGACAACCCTGTCTTCCTGTTGGTCAATCAGATATTCCTAGAGCAAGCACCGTCAAAATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAATATCAAGGTAACATTGATGGAGCTTACTTCGGAACTACATTTTCTCACCTCTTTCTGATGACATATGGACACCTTAAGCCGCAAAAAGCTATTCAGAGCTACGTTCCGAGAGTGTTTGGATTCAAGATCCACAAGCCATGAAACTGAAACTTTAAAGCTTTCACTTGGGTGAGTTCTATGCATCTCGGACATACTTTGAGAGTTAGTGTAGCTCTGCCTCCTATGAGAATACTTTGAGAATTATCTGCGTCTGAATGTTATAATGAAGCATTCGTCTACCCCTTGTGAATGGAGGTGCCAATTCTCATGATGATGGCTCCTATTTGGTGAGCTTCTTTAGGATCCCCACATCCCCCCCCCC

Coding sequence (CDS)

ATGTTTACAGAGGAACAGAATGAACTAATTGAATCTGCAGCTGAAATGCTTTATGGTCTAATTCATGCGAGATACATACTGACAAGTAAAGGCATGGCTGCTATGCTGGACAAGTTCAAGAATTATGACTTTGGGAGATGCCCTAGAGTTTACTGCTGTGGACAACCCTGTCTTCCTGTTGGTCAATCAGATATTCCTAGAGCAAGCACCGTCAAAATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAATATCAAGGTAACATTGATGGAGCTTACTTCGGAACTACATTTTCTCACCTCTTTCTGATGACATATGGACACCTTAAGCCGCAAAAAGCTATTCAGAGCTACGTTCCGAGAGTGTTTGGATTCAAGATCCACAAGCCATGA

Protein sequence

MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPVGQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQSYVPRVFGFKIHKP
Homology
[Close]
BLAST of Carg08809 vs. NCBI nr
Match: XP_023533600.1 (casein kinase II subunit beta-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 2.3e-74
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 159 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 218

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS
Sbjct: 219 GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 278

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 279 YVPRVFGFKIHKP 291

[Close]
BLAST of Carg08809 vs. NCBI nr
Match: KAG7036163.1 (Casein kinase II subunit beta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.9 bits (738), Expect = 2.3e-74
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS
Sbjct: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 121 YVPRVFGFKIHKP 133

[Close]
BLAST of Carg08809 vs. NCBI nr
Match: XP_022958010.1 (casein kinase II subunit beta-1 isoform X1 [Cucurbita moschata] >XP_022995560.1 casein kinase II subunit beta-1 isoform X1 [Cucurbita maxima] >KAG6606216.1 Casein kinase II subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.9 bits (738), Expect = 2.3e-74
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS
Sbjct: 215 GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 274

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 275 YVPRVFGFKIHKP 287

[Close]
BLAST of Carg08809 vs. NCBI nr
Match: XP_022931792.1 (casein kinase II subunit beta-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 160 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 219

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+ TVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGH KPQKA+QS
Sbjct: 220 GQSDIPRSGTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHHKPQKAVQS 279

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 280 YVPRVFGFKIHKP 292

[Close]
BLAST of Carg08809 vs. NCBI nr
Match: XP_022973245.1 (casein kinase II subunit beta-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 160 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 219

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+ TVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGH KPQKA+QS
Sbjct: 220 GQSDIPRSGTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHHKPQKAVQS 279

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 280 YVPRVFGFKIHKP 292

[Close]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match: P40229 (Casein kinase II subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=CKB2 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-72
Identity = 122/133 (91.73%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYG+IHAR+ILTSKG+A+MLDK+KNYDFGRCPRVYCCGQPCLPV
Sbjct: 150 MFTEEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCLPV 209

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCP+CEDVYYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKPQKA QS
Sbjct: 210 GQSDIPRASTVKIYCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKASQS 269

Query: 121 YVPRVFGFKIHKP 134
           Y  RVFGFK+HKP
Sbjct: 270 YTQRVFGFKLHKP 282

[Close]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match: P40228 (Casein kinase II subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=CKB1 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-72
Identity = 121/133 (90.98%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKG+AAMLDK+KNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSD+PR+STVKIYCP+CED+YYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKP KA Q+
Sbjct: 215 GQSDLPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPAKATQN 274

Query: 121 YVPRVFGFKIHKP 134
           YV RVFGFK+HKP
Sbjct: 275 YVQRVFGFKLHKP 287

[Close]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match: O80507 (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana OX=3702 GN=CKB4 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-66
Identity = 108/131 (82.44%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQ+E++ESAAEMLYGLIH RYILT+KGMAAM++K+KNYDFGRCPRV+CCGQ CLPV
Sbjct: 150 MFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSCLPV 209

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+STVKIYCP+CED+YYPRSKYQGNIDGAYFGTTF HLFLM YG++KPQK  Q+
Sbjct: 210 GQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKPAQN 269

Query: 121 YVPRVFGFKIH 132
           YVP++FGFK+H
Sbjct: 270 YVPKIFGFKVH 280

[Close]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match: O81275 (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=CKB3 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 6.8e-66
Identity = 109/133 (81.95%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFT+EQ+E++ESAAEMLYGLIH RYILT+KGMAAM +K+KN DFGRCPRV+CCGQ CLPV
Sbjct: 144 MFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSCLPV 203

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+STVKIYCP+CED+ YPRSK+QGNIDGAYFGTTF HLFLMTYG+LKPQK  QS
Sbjct: 204 GQSDIPRSSTVKIYCPKCEDISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKPTQS 263

Query: 121 YVPRVFGFKIHKP 134
           YVP++FGFK+HKP
Sbjct: 264 YVPKIFGFKVHKP 276

[Close]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match: Q54PF1 (Casein kinase II subunit beta OS=Dictyostelium discoideum OX=44689 GN=csnk2b PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 76/130 (58.46%), Postives = 99/130 (76.15%), Query Frame = 0 

Query: 3   TEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPVGQ 62
           +E+Q E +E +A++LYGLIHARYILT KG+A M +KFK  +FGRCPRV+C  QP LPVG 
Sbjct: 77  SEDQQEALERSADILYGLIHARYILTPKGLAHMHEKFKKAEFGRCPRVFCQNQPVLPVGL 136

Query: 63  SDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQSYV 122
           +D+    TVK+YCPRC D++ P+ +   +IDGAYFGTTF HL L+TY  L P K  Q Y+
Sbjct: 137 ADMQGVDTVKVYCPRCNDIFNPKYRRHSHIDGAYFGTTFPHLLLITYPELIPTKPPQQYI 196

Query: 123 PRVFGFKIHK 133
           P+++GFKIHK
Sbjct: 197 PKIYGFKIHK 206

[Close]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match: A0A6J1K4B0 (Casein kinase II subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491059 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS
Sbjct: 215 GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 274

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 275 YVPRVFGFKIHKP 287

[Close]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match: A0A6J1H292 (Casein kinase II subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111459373 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS
Sbjct: 215 GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 274

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 275 YVPRVFGFKIHKP 287

[Close]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match: A0A6J1IAV7 (Casein kinase II subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111471806 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.0e-73
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 160 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 219

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+ TVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGH KPQKA+QS
Sbjct: 220 GQSDIPRSGTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHHKPQKAVQS 279

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 280 YVPRVFGFKIHKP 292

[Close]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match: A0A6J1EUQ0 (Casein kinase II subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111438065 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.0e-73
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV
Sbjct: 160 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 219

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+ TVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGH KPQKA+QS
Sbjct: 220 GQSDIPRSGTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHHKPQKAVQS 279

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 280 YVPRVFGFKIHKP 292

[Close]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match: A0A6J1DVA6 (Casein kinase II subunit beta OS=Momordica charantia OX=3673 GN=LOC111024769 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDK+KNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+STVKIYCPRCED+YYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKPQKA+Q 
Sbjct: 215 GQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKAVQG 274

Query: 121 YVPRVFGFKIHKP 134
           YVPRVFGFKIHKP
Sbjct: 275 YVPRVFGFKIHKP 287

[Close]
BLAST of Carg08809 vs. TAIR 10
Match: AT4G17640.1 (casein kinase II beta chain 2 )

HSP 1 Score: 272.3 bits (695), Expect = 2.0e-73
Identity = 122/133 (91.73%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYG+IHAR+ILTSKG+A+MLDK+KNYDFGRCPRVYCCGQPCLPV
Sbjct: 150 MFTEEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCLPV 209

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPRASTVKIYCP+CEDVYYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKPQKA QS
Sbjct: 210 GQSDIPRASTVKIYCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKASQS 269

Query: 121 YVPRVFGFKIHKP 134
           Y  RVFGFK+HKP
Sbjct: 270 YTQRVFGFKLHKP 282

[Close]
BLAST of Carg08809 vs. TAIR 10
Match: AT5G47080.1 (casein kinase II beta chain 1 )

HSP 1 Score: 271.9 bits (694), Expect = 2.7e-73
Identity = 121/133 (90.98%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQNELIESAAEMLYGLIHARYILTSKG+AAMLDK+KNYDFGRCPRVYCCGQPCLPV
Sbjct: 155 MFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPV 214

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSD+PR+STVKIYCP+CED+YYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKP KA Q+
Sbjct: 215 GQSDLPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPAKATQN 274

Query: 121 YVPRVFGFKIHKP 134
           YV RVFGFK+HKP
Sbjct: 275 YVQRVFGFKLHKP 287

[Close]
BLAST of Carg08809 vs. TAIR 10
Match: AT4G17640.2 (casein kinase II beta chain 2 )

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-71
Identity = 119/130 (91.54%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 4   EEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPVGQS 63
           EEQNELIESAAEMLYG+IHAR+ILTSKG+A+MLDK+KNYDFGRCPRVYCCGQPCLPVGQS
Sbjct: 148 EEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCLPVGQS 207

Query: 64  DIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQSYVP 123
           DIPRASTVKIYCP+CEDVYYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKPQKA QSY  
Sbjct: 208 DIPRASTVKIYCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKASQSYTQ 267

Query: 124 RVFGFKIHKP 134
           RVFGFK+HKP
Sbjct: 268 RVFGFKLHKP 277

[Close]
BLAST of Carg08809 vs. TAIR 10
Match: AT5G47080.4 (casein kinase II beta chain 1 )

HSP 1 Score: 265.8 bits (678), Expect = 1.9e-71
Identity = 118/130 (90.77%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 4   EEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPVGQS 63
           EEQNELIESAAEMLYGLIHARYILTSKG+AAMLDK+KNYDFGRCPRVYCCGQPCLPVGQS
Sbjct: 153 EEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQS 212

Query: 64  DIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQSYVP 123
           D+PR+STVKIYCP+CED+YYPRSKYQGNIDGAYFGTTF HLFLMTYGHLKP KA Q+YV 
Sbjct: 213 DLPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPAKATQNYVQ 272

Query: 124 RVFGFKIHKP 134
           RVFGFK+HKP
Sbjct: 273 RVFGFKLHKP 282

[Close]
BLAST of Carg08809 vs. TAIR 10
Match: AT2G44680.1 (casein kinase II beta subunit 4 )

HSP 1 Score: 253.8 bits (647), Expect = 7.5e-68
Identity = 108/131 (82.44%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPV 60
           MFTEEQ+E++ESAAEMLYGLIH RYILT+KGMAAM++K+KNYDFGRCPRV+CCGQ CLPV
Sbjct: 150 MFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSCLPV 209

Query: 61  GQSDIPRASTVKIYCPRCEDVYYPRSKYQGNIDGAYFGTTFSHLFLMTYGHLKPQKAIQS 120
           GQSDIPR+STVKIYCP+CED+YYPRSKYQGNIDGAYFGTTF HLFLM YG++KPQK  Q+
Sbjct: 210 GQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKPAQN 269

Query: 121 YVPRVFGFKIH 132
           YVP++FGFK+H
Sbjct: 270 YVPKIFGFKVH 280

The following BLAST results are available for this feature:
BLAST of Carg08809 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533600.12.3e-74100.00casein kinase II subunit beta-2-like isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG7036163.12.3e-74100.00Casein kinase II subunit beta-2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022958010.12.3e-74100.00casein kinase II subunit beta-1 isoform X1 [Cucurbita moschata] >XP_022995560.1 ... [more]
XP_022931792.11.2e-7296.99casein kinase II subunit beta-1-like isoform X1 [Cucurbita moschata][more]
XP_022973245.11.2e-7296.99casein kinase II subunit beta-1-like isoform X1 [Cucurbita maxima][more]
BLAST of Carg08809 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P402292.9e-7291.73Casein kinase II subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=CKB2 PE=1 SV=... [more]
P402283.7e-7290.98Casein kinase II subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=CKB1 PE=1 SV=... [more]
O805071.1e-6682.44Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana OX=3702 GN=CKB4... [more]
O812756.8e-6681.95Casein kinase II subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=CKB3 PE=1 SV=... [more]
Q54PF11.3e-4358.46Casein kinase II subunit beta OS=Dictyostelium discoideum OX=44689 GN=csnk2b PE=... [more]
BLAST of Carg08809 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K4B01.1e-74100.00Casein kinase II subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491059 PE=3 S... [more]
A0A6J1H2921.1e-74100.00Casein kinase II subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111459373 PE=3... [more]
A0A6J1IAV76.0e-7396.99Casein kinase II subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111471806 PE=3 S... [more]
A0A6J1EUQ06.0e-7396.99Casein kinase II subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111438065 PE=3... [more]
A0A6J1DVA61.0e-7295.49Casein kinase II subunit beta OS=Momordica charantia OX=3673 GN=LOC111024769 PE=... [more]
BLAST of Carg08809 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G17640.12.0e-7391.73casein kinase II beta chain 2 [more]
AT5G47080.12.7e-7390.98casein kinase II beta chain 1 [more]
AT4G17640.21.5e-7191.54casein kinase II beta chain 2 [more]
AT5G47080.41.9e-7190.77casein kinase II beta chain 1 [more]
AT2G44680.17.5e-6882.44casein kinase II beta subunit 4 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000704Casein kinase II, regulatory subunitPRINTSPR00472CASNKINASEIIcoord: 18..39
score: 69.6
coord: 65..86
score: 63.07
coord: 93..110
score: 61.81
coord: 43..64
score: 75.0
IPR000704Casein kinase II, regulatory subunitSMARTSM01085CK_II_beta_2coord: 1..129
e-value: 7.4E-60
score: 214.8
IPR000704Casein kinase II, regulatory subunitPFAMPF01214CK_II_betacoord: 3..129
e-value: 8.4E-55
score: 185.4
IPR000704Casein kinase II, regulatory subunitPANTHERPTHR11740CASEIN KINASE II SUBUNIT BETAcoord: 1..133
IPR000704Casein kinase II, regulatory subunitPROSITEPS01101CK2_BETAcoord: 47..78
IPR016149Casein kinase II, regulatory subunit, N-terminalGENE3D1.10.1820.10protein kinase ck2 holoenzyme, chain C, domain 1coord: 2..43
e-value: 1.1E-14
score: 56.7
NoneNo IPR availableGENE3D2.20.25.20coord: 44..118
e-value: 2.9E-35
score: 122.0
NoneNo IPR availablePANTHERPTHR11740:SF29CASEIN KINASE II SUBUNIT BETAcoord: 1..133
IPR035991Casein kinase II subunit beta-likeSUPERFAMILY57798Casein kinase II beta subunitcoord: 3..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08809-RACarg08809-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0080163 regulation of protein serine/threonine phosphatase activity
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005956 protein kinase CK2 complex
molecular_function GO:0016301 kinase activity
molecular_function GO:0019887 protein kinase regulator activity