Carg08555 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08555
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Location	Carg_Chr02: 4988940 .. 4991922 (-)
RNA-Seq Expression	Carg08555
Synteny	Carg08555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCCTGTTGAGTGTTGACTGAGAACGCATTCAAAAACGAAGAAGAGAACAGAGGGAGAAAAATTCACCGGCAATTTGGCGGGAAAGCTGAAACCATGAGCTCATCGGCGGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGTTTTTCCTATTTTTCTTCCACTTTCAGTTACAGTTCTCCTTTTTCTGTTCATTTACCGAAGAGCTTTTCAGATTCTCTCTCTGTTTGTCTGGATTGATGTCCTTATTTGTTTGTTAGGTTATTGATTTACTTGTTTATCACTCAGGATGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTGAACTTTGAGTTTATGATTTGAATCGCCTATTTATCGATTGTTGGTGTTGATTCCGTAATTTGGATGCGAAAAGAAATATTGTGCTTGTTTTGCGTTATTAAGTGGTAGGTGAAGTTCAAAATAAAGAATAATTACTTGAAATGTACATTATTTGAAAAGTTAATGTTCGAAGAAGGAAATTGTTTCTTATGCTTCCATCTTCCATTCCGTTTTTGGAGTTGCTGAAATTCTGCTGCTCTTCTTTACGCTACAGGTTTTCATTCGTTATGAATACACTGCACAAGCTCGGCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGACCTGACATGCAACTTCTGCTCAAGTATATACTTTCCTCTCTGTTGCATCAAGTTTTGAATCTATTGTTAGACTCTATGTTTGGCTTTGTATTGGCAGAAAAAATCAAGTACATAAAGTTTCAACTTTTCTGATGTTAATTTAATTTGACTGCATTGGATGATGAAAGTCCTACCTCGGCTAATTTAGGGAATGATCATGGGTTTATGAGCAAGGAATACTATCTCCATTGGTATGAGGTCTTTTGGGAAGCCCAAAGCAAAGTCATGTTAATTTAATTTCAACTATTCTGATGTTAATTTAATTCGACTGTGGACTTCGGCTAGTTCAGGTAATGATCATGGGTTTATAATTAAAGAATACTATCTCCATTGGTAATAGGCCTTTTGGGGAAGCCCAAAGCAAAGTCACGAGAGTTTATACTCAAAGTGGACAATATCATACTATTGCGGAGAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCCCCAAACTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAGGAGTCGAGCCTCCTCGAAGGCATAGTAAAAAATGACTAAGACTCCACAAGAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGTACTTTGTTCGAAGGGAGGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGGTCATGGGTATAAATCAAGGAATACTATCACCATTGGTACGAAGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGCGTTTATGCTCAAAGTGGATAGTATCATACCATTGTTGAGAGTCGTGTTCGTTTAACAGACTCTACCTAAAGAAGAAGAAGAAGAACTGGATTTGTTTCTGGTTTTTAGACTATGACTTCATATTGAGCAATGAAACCGAGCATCTAAACTTCACGGCCTCTGCTAAAATTTGATATTATATCAACTTGTTGAACCGTTTTATGATAAAATTTATGGCCCTTGTAGATTTTTTTTTTCCAAAATTTCTTTGTATTCTATCCTGAAGAACGTGTTGGTGCACTTCAAATTTTATGCAGATCTGAGATAGGAAATACAGTTCATTTGTATGTTCGTTTTCCATTCAACGACTCTAATAACGTTGGTCATTTCATCTGGGGTTTATTATCAGGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACCTGCAGGAATTAGCCCACTCAGTTTCACTGTCAAGGTATTAGTTCATATTGCAACTTCGAAACCTTTTATGTGCACCAAAAAGATGATATCTGACACAGTTGCTAGAAGATTCAAATCTGAAAATACTTAGAAGGAAAGTTAACAATATGAAGGGATGAGGCATGCGAATCTGAATAATTTATTACAGATCATCATATAAAAATTACACAAACAGTTGGAGGTCAAATATTATCTGTGGTTAATATCAATCGCCTCGACTTGAAGCATGTAGTTTTAATGCTAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTCCCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAAGTCCTTGTAACGTTGTAATAATACCAATACAACCTATTCTTATTTCCTGTACAGGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTGTCCTACAGGTAACATGCTTCCTCCACAAAGTTAAAACGTTCTAATCTTAGCTCATACTTAACATGTGAGCAATTTTTCTGCTTTGTTTTGTGCTTCGATATGTGCAGGTACAAATACAAATTTCTACTAGCGACAACTTCGAACATACCGAGCAGTGTGATAAGAGAAAATAGGGGAAGCAAGTTGACCATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

mRNA sequence

AAAGCCTGTTGAGTGTTGACTGAGAACGCATTCAAAAACGAAGAAGAGAACAGAGGGAGAAAAATTCACCGGCAATTTGGCGGGAAAGCTGAAACCATGAGCTCATCGGCGGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGATGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACACTGCACAAGCTCGGCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGACCTGACATGCAACTTCTGCTCAAGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACCTGCAGGAATTAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTCCCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAAGTCCTTGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTGTCCTACAGGTACAAATACAAATTTCTACTAGCGACAACTTCGAACATACCGAGCAGTGTGATAAGAGAAAATAGGGGAAGCAAGTTGACCATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

Coding sequence (CDS)

ATGAGCTCATCGGCGGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGATGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACACTGCACAAGCTCGGCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGACCTGACATGCAACTTCTGCTCAAGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACCTGCAGGAATTAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTCCCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAAGTCCTTGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTGTCCTACAGGTACAAATACAAATTTCTACTAGCGACAACTTCGAACATACCGAGCAGTGTGATAAGAGAAAATAGGGGAAGCAAGTTGACCATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

Protein sequence

MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEEDTTDD

Homology

[Close]

BLAST of Carg08555 vs. NCBI nr
Match: KAG7035494.1 (Cell cycle checkpoint protein RAD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.4 bits (1635), Expect = 5.2e-178
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Sbjct: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 314

[Close]

BLAST of Carg08555 vs. NCBI nr
Match: KAG6605579.1 (Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 596.3 bits (1536), Expect = 1.6e-166
Identity = 300/314 (95.54%), Postives = 300/314 (95.54%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. NCBI nr
Match: XP_022957691.1 (uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata])

HSP 1 Score: 592.4 bits (1526), Expect = 2.2e-165
Identity = 298/314 (94.90%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. NCBI nr
Match: XP_023534468.1 (uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 295/314 (93.95%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGVVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. NCBI nr
Match: XP_022996322.1 (uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima])

HSP 1 Score: 583.6 bits (1503), Expect = 1.0e-162
Identity = 294/314 (93.63%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. ExPASy Swiss-Prot
Match: Q9QWZ1 (Cell cycle checkpoint protein RAD1 OS=Mus musculus OX=10090 GN=Rad1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.7e-17
Identity = 77/307 (25.08%), Postives = 138/307 (44.95%), Query Frame = 0


Query: 13  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYE 72
           LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q +VF  + 
Sbjct: 17  LVASLDNVRNLSTVLKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQADVFQEFV 76

Query: 73  YTAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYA 132
              ++   F ++L I +D L+ F     PG L+ + + Y G    L+L  ++        
Sbjct: 77  IQEES-VTFRINLTILLDCLSIFGSSPTPGTLTALRMCYQGYGHPLML-FLEEGGVVTVC 136

Query: 133 EIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV-- 192
           +I T+ PE  + D++F    +      ++S  L+EA  +L+  G  +QI++ P  P    
Sbjct: 137 KITTQEPEE-TLDFDFCSTNVMN-KIILQSEGLREAFSELDMTGDVLQITVSPDKPYFRL 196

Query: 193 -TFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTS 252
            TF   G+  L                  Y  ++DL+ +FHCD+    RYK   L  +T 
Sbjct: 197 STFGNAGNSHLD-----------------YPKDSDLVEAFHCDKTQVNRYKLSLLKPSTK 256

Query: 253 NIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVK 312
            +  S     + S  T  R G L +Q+++                  +  +I F+E++  
Sbjct: 257 ALALSC----KVSIRTDNR-GFLSLQYMIR----------------NEDGQICFVEYYCC 279

Query: 313 PEEDTTD 314
           P+E+  +
Sbjct: 317 PDEEVPE 279

[Close]

BLAST of Carg08555 vs. ExPASy TrEMBL
Match: A0A6J1GZY3 (uncharacterized protein LOC111459157 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459157 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 298/314 (94.90%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. ExPASy TrEMBL
Match: A0A6J1K1L0 (uncharacterized protein LOC111491589 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491589 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.1e-163
Identity = 294/314 (93.63%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV
Sbjct: 61  VYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISL
Sbjct: 121 DSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EPSPPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDRPVSYRYKYKF
Sbjct: 181 EPSPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRPVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTTDD
Sbjct: 301 IEFFVKPEEDTTDD 301

[Close]

BLAST of Carg08555 vs. ExPASy TrEMBL
Match: A0A5D3DUR6 (Syntaxin-22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00620 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.3e-154
Identity = 274/314 (87.26%), Postives = 290/314 (92.36%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQRE+FIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLS +E+KYPGPDMQLLLK+V
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DS DACIYAEIRTRIP+TISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSV I+L
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           +PSPPSVTFK EGHGDLQ             VDFMYYANTDLLISFHCDR VSYRYKYKF
Sbjct: 181 QPSPPSVTFKAEGHGDLQ-------------VDFMYYANTDLLISFHCDRQVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEED+++D
Sbjct: 301 IEFFVKPEEDSSND 301

[Close]

BLAST of Carg08555 vs. ExPASy TrEMBL
Match: A0A1S3B4R8 (uncharacterized protein LOC103486009 OS=Cucumis melo OX=3656 GN=LOC103486009 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.3e-154
Identity = 274/314 (87.26%), Postives = 290/314 (92.36%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQRE+FIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGRLS +E+KYPGPDMQLLLK+V
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DS DACIYAEIRTRIP+TISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSV I+L
Sbjct: 121 DSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIAL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           +PSPPSVTFK EGHGDLQ             VDFMYYANTDLLISFHCDR VSYRYKYKF
Sbjct: 181 QPSPPSVTFKAEGHGDLQ-------------VDFMYYANTDLLISFHCDRQVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPSRIAF 300

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEED+++D
Sbjct: 301 IEFFVKPEEDSSND 301

[Close]

BLAST of Carg08555 vs. ExPASy TrEMBL
Match: A0A6J1CW92 (uncharacterized protein LOC111015362 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015362 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.8e-153
Identity = 279/314 (88.85%), Postives = 288/314 (91.72%), Query Frame = 0


Query: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDSETPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSV 120
           VYLQRE+FIRYEY+AQARPRFGVSLG FVDSLNTFSVPGR S  EIKYPGPDMQLL+KSV
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGTFVDSLNTFSVPGRSSTTEIKYPGPDMQLLIKSV 120

Query: 121 DSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISL 180
           DS DACIYAEIRTRIPETISWDY FEPAG SPLSFTVKSAALKEAIDDLEWPGSS+QI L
Sbjct: 121 DSLDACIYAEIRTRIPETISWDYIFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSIQIVL 180

Query: 181 EPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKF 240
           EP+PPSVTFKGEGHGDLQ             VDFMYYANTDLLISFHCDR VSYRYKYKF
Sbjct: 181 EPAPPSVTFKGEGHGDLQ-------------VDFMYYANTDLLISFHCDRRVSYRYKYKF 240

Query: 241 LLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF 300
           L ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAF
Sbjct: 241 LRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAF 299

Query: 301 IEFFVKPEEDTTDD 315
           IEFFVKPEEDTT+D
Sbjct: 301 IEFFVKPEEDTTND 299

[Close]

BLAST of Carg08555 vs. TAIR 10
Match: AT4G17760.1 (damaged DNA binding;exodeoxyribonuclease IIIs )

HSP 1 Score: 477.6 bits (1228), Expect = 7.5e-135
Identity = 229/308 (74.35%), Postives = 264/308 (85.71%), Query Frame = 0


Query: 2   SSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKV 61
           SS A++ D+PDL+CQLDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKV
Sbjct: 5   SSPAIEPDTPDLICQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCLQAKV 64

Query: 62  YLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVD 121
           YLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  + +EIKYPGPDM+LLLKSVD
Sbjct: 65  YLQRELFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGHSNTIEIKYPGPDMELLLKSVD 124

Query: 122 SSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLE 181
           + ++CIY+EIRTRIPET++WDYNFE AGI+PL+FTVKSAALKEAIDDLEWPGSSVQISL+
Sbjct: 125 TLNSCIYSEIRTRIPETVTWDYNFEQAGIAPLTFTVKSAALKEAIDDLEWPGSSVQISLQ 184

Query: 182 PSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFL 241
             PP V F+GEGHGDLQ             +DFMYYANTDLL++FHCD  VSY YKYKFL
Sbjct: 185 KEPPCVIFRGEGHGDLQ-------------IDFMYYANTDLLLAFHCDTEVSYGYKYKFL 244

Query: 242 LATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFI 301
            ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ PSRIA+I
Sbjct: 245 KATTANIPGNVVRENRGSKLTIGRGGMLKVQHLVSVSKALA--PQVESAGYQPPSRIAYI 297

Query: 302 EFFVKPEE 310
           EFFVKPEE
Sbjct: 305 EFFVKPEE 297

[Close]

BLAST of Carg08555 vs. TAIR 10
Match: AT4G17760.2 (damaged DNA binding;exodeoxyribonuclease IIIs )

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 189/257 (73.54%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 53  ESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPD 112
           ESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  + +EIKYPGPD
Sbjct: 6   ESGCLQAKVYLQRELFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGHSNTIEIKYPGPD 65

Query: 113 MQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWP 172
           M+LLLKSVD+ ++CIY+EIRTRIPET++WDYNFE AGI+PL+FTVKSAALKEAIDDLEWP
Sbjct: 66  MELLLKSVDTLNSCIYSEIRTRIPETVTWDYNFEQAGIAPLTFTVKSAALKEAIDDLEWP 125

Query: 173 GSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPV 232
           GSSVQISL+  PP V F+GEGHGDLQ             +DFMYYANTDLL++FHCD  V
Sbjct: 126 GSSVQISLQKEPPCVIFRGEGHGDLQ-------------IDFMYYANTDLLLAFHCDTEV 185

Query: 233 SYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGY 292
           SY YKYKFL ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGY
Sbjct: 186 SYGYKYKFLKATTANIPGNVVRENRGSKLTIGRGGMLKVQHLVSVSKALA--PQVESAGY 245

Query: 293 QQPSRIAFIEFFVKPEE 310
           Q PSRIA+IEFFVKPEE
Sbjct: 246 QPPSRIAYIEFFVKPEE 247

The following BLAST results are available for this feature:

BLAST of Carg08555 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035494.1	5.2e-178	100.00	Cell cycle checkpoint protein RAD1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605579.1	1.6e-166	95.54	Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022957691.1	2.2e-165	94.90	uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]	[more]
XP_023534468.1	1.9e-164	93.95	uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022996322.1	1.0e-162	93.63	uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg08555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9QWZ1	4.7e-17	25.08	Cell cycle checkpoint protein RAD1 OS=Mus musculus OX=10090 GN=Rad1 PE=1 SV=1	[more]

BLAST of Carg08555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZY3	1.1e-165	94.90	uncharacterized protein LOC111459157 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K1L0	5.1e-163	93.63	uncharacterized protein LOC111491589 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3DUR6	4.3e-154	87.26	Syntaxin-22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B4R8	4.3e-154	87.26	uncharacterized protein LOC103486009 OS=Cucumis melo OX=3656 GN=LOC103486009 PE=...	[more]
A0A6J1CW92	2.8e-153	88.85	uncharacterized protein LOC111015362 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg08555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17760.1	7.5e-135	74.35	damaged DNA binding;exodeoxyribonuclease IIIs	[more]
AT4G17760.2	4.2e-109	73.54	damaged DNA binding;exodeoxyribonuclease IIIs	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003021	Rad1/Rec1/Rad17	PRINTS	PR01245	RAD1REC1	coord: 15..32 score: 26.98 coord: 59..75 score: 22.69 coord: 258..275 score: 18.25 coord: 295..310 score: 29.46
IPR003021	Rad1/Rec1/Rad17	PFAM	PF02144	Rad1	coord: 14..247 e-value: 4.5E-18 score: 65.3
IPR003021	Rad1/Rec1/Rad17	PANTHER	PTHR10870	CELL CYCLE CHECKPOINT PROTEIN RAD1	coord: 8..311
None	No IPR available	GENE3D	3.70.10.10		coord: 9..309 e-value: 2.7E-45 score: 156.4
None	No IPR available	CDD	cd00577	PCNA	coord: 14..275 e-value: 1.18281E-35 score: 127.36
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 154..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08555-RA	Carg08555-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000077	DNA damage checkpoint signaling
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030896	checkpoint clamp complex