Carg08531 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08531
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein BRANCHLESS TRICHOME-like
Location	Carg_Chr02: 5134116 .. 5134879 (+)
RNA-Seq Expression	Carg08531
Synteny	Carg08531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTGCATTGTGAAATTAATAAGGAAGAGGTGCATGTGACATGGAGCCAATGGACCTACCATTACAACCCATTACCTTCTTTCTTCGCAAAACAAGAAAAAGAAAAAGAAAGTAAACATAGTACCATTAAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGTGAAGACATGGAGGAAGAGATGATGATGAACAATGATACTTCCCCAAGATGGAAACTTTACGAAAACCCATTTTATATTAACACTCCTCCTCATGAATCCTCCACCACCAACATCAACCCATTCAAAAGGAGAATGGATTCGGAGCTTCATCTTGCGCTCAACCACATCCTGGAGCTCCAAACCCAGCTTTGCTACGAGCGGAAGGCTCGTAAAAAGGTCGAGTCTTTGGCGAAGAGGCTGCTCAAGGAGCTGAATGAAGAGAGGAAGCAAAGGAAAGCCATGGAAGGAGTGTGTCATGAGCTTGCTACACACATTTCACCTCATCAACCCCACAAGGAGATTCAAGAGGAGCGCAACATGCTGAGGTTGGCTCAGGCTTTGCGTGAAGAGAGACTACAAATGAAGCTTGCAGAAGTGAAAACCGTGTTCGGAACCACCACCACCACCACCACCACATTTCCCGGCGGTGGAAGGTACGGACGGCGGAGGGATTGAAAAGTAGAGATTCAGATGCCAAATTGGAGTGTCAGATGGCTCAGCTTAAAGTTTTACTGAAACCAAAAGGGACTGTCGGATCCAACAACCTCATTATTACCTAA

mRNA sequence

ATGTTGGTGCATTGTGAAATTAATAAGGAAGAGGTGCATGTGACATGGAGCCAATGGACCTACCATTACAACCCATTACCTTCTTTCTTCGCAAAACAAGAAAAAGAAAAAGAAAGTAAACATAGTACCATTAAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGTGAAGACATGGAGGAAGAGATGATGATGAACAATGATACTTCCCCAAGATGGAAACTTTACGAAAACCCATTTTATATTAACACTCCTCCTCATGAATCCTCCACCACCAACATCAACCCATTCAAAAGGAGAATGGATTCGGAGCTTCATCTTGCGCTCAACCACATCCTGGAGCTCCAAACCCAGCTTTGCTACGAGCGGAAGGCTCGTAAAAAGGTCGAGTCTTTGGCGAAGAGGCTGCTCAAGGAGCTGAATGAAGAGAGGAAGCAAAGGAAAGCCATGGAAGGAGTGTGTCATGAGCTTGCTACACACATTTCACCTCATCAACCCCACAAGGAGATTCAAGAGGAGCGCAACATGCTGAGGTTGGCTCAGGCTTTGCGTGAAGAGAGACTACAAATGAAGCTTGCAGAAGTGAAAACCGTGTTCGGAACCACCACCACCACCACCACCACATTTCCCGGCGGTGGAAGAGATTCAGATGCCAAATTGGAGTGTCAGATGGCTCAGCTTAAAGTTTTACTGAAACCAAAAGGGACTGTCGGATCCAACAACCTCATTATTACCTAA

Coding sequence (CDS)

ATGTTGGTGCATTGTGAAATTAATAAGGAAGAGGTGCATGTGACATGGAGCCAATGGACCTACCATTACAACCCATTACCTTCTTTCTTCGCAAAACAAGAAAAAGAAAAAGAAAGTAAACATAGTACCATTAAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGTGAAGACATGGAGGAAGAGATGATGATGAACAATGATACTTCCCCAAGATGGAAACTTTACGAAAACCCATTTTATATTAACACTCCTCCTCATGAATCCTCCACCACCAACATCAACCCATTCAAAAGGAGAATGGATTCGGAGCTTCATCTTGCGCTCAACCACATCCTGGAGCTCCAAACCCAGCTTTGCTACGAGCGGAAGGCTCGTAAAAAGGTCGAGTCTTTGGCGAAGAGGCTGCTCAAGGAGCTGAATGAAGAGAGGAAGCAAAGGAAAGCCATGGAAGGAGTGTGTCATGAGCTTGCTACACACATTTCACCTCATCAACCCCACAAGGAGATTCAAGAGGAGCGCAACATGCTGAGGTTGGCTCAGGCTTTGCGTGAAGAGAGACTACAAATGAAGCTTGCAGAAGTGAAAACCGTGTTCGGAACCACCACCACCACCACCACCACATTTCCCGGCGGTGGAAGAGATTCAGATGCCAAATTGGAGTGTCAGATGGCTCAGCTTAAAGTTTTACTGAAACCAAAAGGGACTGTCGGATCCAACAACCTCATTATTACCTAA

Protein sequence

MLVHCEINKEEVHVTWSQWTYHYNPLPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQLCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLRLAQALREERLQMKLAEVKTVFGTTTTTTTTFPGGGRDSDAKLECQMAQLKVLLKPKGTVGSNNLIIT

Homology

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BLAST of Carg08531 vs. NCBI nr
Match: KAG7035518.1 (Protein BRANCHLESS TRICHOME, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MLVHCEINKEEVHVTWSQWTYHYNPLPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEE 60
           MLVHCEINKEEVHVTWSQWTYHYNPLPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEE
Sbjct: 1   MLVHCEINKEEVHVTWSQWTYHYNPLPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEE 60

Query: 61  EMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQLCY 120
           EMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQLCY
Sbjct: 61  EMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQLCY 120

Query: 121 ERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLRLAQ 180
           ERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLRLAQ
Sbjct: 121 ERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLRLAQ 180

Query: 181 ALREERLQMKLAEVKTVFGTTTTTTTTFPGGGRDSDAKLECQMAQLKVLLKPKGTVGSNN 240
           ALREERLQMKLAEVKTVFGTTTTTTTTFPGGGRDSDAKLECQMAQLKVLLKPKGTVGSNN
Sbjct: 181 ALREERLQMKLAEVKTVFGTTTTTTTTFPGGGRDSDAKLECQMAQLKVLLKPKGTVGSNN 240

Query: 241 LIIT 245
           LIIT
Sbjct: 241 LIIT 244

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BLAST of Carg08531 vs. NCBI nr
Match: KAG6605607.1 (Protein BRANCHLESS TRICHOME, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.7 bits (761), Expect = 8.9e-77
Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 58  MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQ 117
           MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTN NPFKRRMDSELHLALNHILELQTQ
Sbjct: 1   MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNTNPFKRRMDSELHLALNHILELQTQ 60

Query: 118 LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR 177
           LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR
Sbjct: 61  LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR 120

Query: 178 LAQALREERLQMKLAEVKTVFGTTTTTTTTFPGGGR 214
           LAQALREERLQMKLAEVKTVFG TTTTTTTFPGGGR
Sbjct: 121 LAQALREERLQMKLAEVKTVFG-TTTTTTTFPGGGR 155

[Close]

BLAST of Carg08531 vs. NCBI nr
Match: XP_022958455.1 (protein BRANCHLESS TRICHOME-like [Cucurbita moschata])

HSP 1 Score: 286.6 bits (732), Expect = 2.0e-73
Identity = 150/156 (96.15%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 58  MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQ 117
           MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTN NPFKRRMDSELHLALNHILELQTQ
Sbjct: 1   MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNTNPFKRRMDSELHLALNHILELQTQ 60

Query: 118 LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR 177
           L YERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNML 
Sbjct: 61  LRYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLS 120

Query: 178 LAQALREERLQMKLAEVKTVFGTTTTTTTTFPGGGR 214
           LAQALREERLQMKLAEVKTVFG   TTTTTFPGGGR
Sbjct: 121 LAQALREERLQMKLAEVKTVFG---TTTTTFPGGGR 153

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BLAST of Carg08531 vs. NCBI nr
Match: XP_023533024.1 (protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.1 bits (710), Expect = 7.3e-71
Identity = 146/158 (92.41%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 58  MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQ 117
           MEEEMMMNNDTSPRWKLYENPFYINTPPH+SSTTN NPFKRRM+SELHLALNHILELQTQ
Sbjct: 1   MEEEMMMNNDTSPRWKLYENPFYINTPPHKSSTTNTNPFKRRMNSELHLALNHILELQTQ 60

Query: 118 LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR 177
           L YERKARKKVESLA+RL KELNEERKQRK MEGVCHELATHIS HQPHKEIQEERNMLR
Sbjct: 61  LRYERKARKKVESLARRLAKELNEERKQRKGMEGVCHELATHISSHQPHKEIQEERNMLR 120

Query: 178 LAQALREERLQMKLAEVKTVFG--TTTTTTTTFPGGGR 214
           LAQALRE+RLQMKLAEVKTVFG  TTTTTTTTF GGGR
Sbjct: 121 LAQALREQRLQMKLAEVKTVFGTTTTTTTTTTFLGGGR 158

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BLAST of Carg08531 vs. NCBI nr
Match: XP_022995873.1 (protein BRANCHLESS TRICHOME-like [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-62
Identity = 140/164 (85.37%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 58  MEEEM---MMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILEL 117
           MEEEM   MMN+DTSPRWKLYENPFYINT PH+SSTTN NPFKRRMD ELHL  NHILEL
Sbjct: 1   MEEEMVMVMMNDDTSPRWKLYENPFYINT-PHKSSTTNGNPFKRRMDWELHLERNHILEL 60

Query: 118 QTQLCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERN 177
           QTQL YERKARKKVESLAKRLLKELNEERKQR+AMEGVCHELATHIS HQPHKEIQEERN
Sbjct: 61  QTQLRYERKARKKVESLAKRLLKELNEERKQREAMEGVCHELATHISSHQPHKEIQEERN 120

Query: 178 MLRLAQALREERLQMKLAEVKTVF-----GTTTTTTTTFPGGGR 214
           MLRLA ALREERLQMKLAEVKTVF        + TTTTFPGGGR
Sbjct: 121 MLRLAPALREERLQMKLAEVKTVFEHMLSQLQSETTTTFPGGGR 163

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BLAST of Carg08531 vs. ExPASy Swiss-Prot
Match: F4I878 (Protein BRANCHLESS TRICHOME OS=Arabidopsis thaliana OX=3702 GN=BLT PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 72  WKLYENPFYINTPPHE------SSTTNINPFKRRMDSELHLALNHILELQTQLCYERKAR 131
           WKLYENP+Y ++   +      +   ++N  K  M+SEL  A + I EL+ +L YERKAR
Sbjct: 39  WKLYENPYYCSSQSQQHQHQRKAFIWDLNFIKVFMESELGKAQDEIKELKAELDYERKAR 98

Query: 132 KKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPH-----KEIQEERNMLRLAQ 191
           ++ E + K+L K++ EER  R+A E     L   +S  +       ++++EER M RLA+
Sbjct: 99  RRAELMIKKLAKDVEEERMAREAEEMQNKRLFKELSSEKSEMVRMKRDLEEERQMHRLAE 158

Query: 192 ALREERLQMKLAEVK 196
            LREER+QMKL + +
Sbjct: 159 VLREERVQMKLMDAR 173

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BLAST of Carg08531 vs. ExPASy TrEMBL
Match: A0A6J1H3H2 (protein BRANCHLESS TRICHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111459676 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 9.9e-74
Identity = 150/156 (96.15%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 58  MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQ 117
           MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTN NPFKRRMDSELHLALNHILELQTQ
Sbjct: 1   MEEEMMMNNDTSPRWKLYENPFYINTPPHESSTTNTNPFKRRMDSELHLALNHILELQTQ 60

Query: 118 LCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLR 177
           L YERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNML 
Sbjct: 61  LRYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLS 120

Query: 178 LAQALREERLQMKLAEVKTVFGTTTTTTTTFPGGGR 214
           LAQALREERLQMKLAEVKTVFG   TTTTTFPGGGR
Sbjct: 121 LAQALREERLQMKLAEVKTVFG---TTTTTFPGGGR 153

[Close]

BLAST of Carg08531 vs. ExPASy TrEMBL
Match: A0A6J1K999 (protein BRANCHLESS TRICHOME-like OS=Cucurbita maxima OX=3661 GN=LOC111491271 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 6.0e-63
Identity = 140/164 (85.37%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 58  MEEEM---MMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILEL 117
           MEEEM   MMN+DTSPRWKLYENPFYINT PH+SSTTN NPFKRRMD ELHL  NHILEL
Sbjct: 1   MEEEMVMVMMNDDTSPRWKLYENPFYINT-PHKSSTTNGNPFKRRMDWELHLERNHILEL 60

Query: 118 QTQLCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPHKEIQEERN 177
           QTQL YERKARKKVESLAKRLLKELNEERKQR+AMEGVCHELATHIS HQPHKEIQEERN
Sbjct: 61  QTQLRYERKARKKVESLAKRLLKELNEERKQREAMEGVCHELATHISSHQPHKEIQEERN 120

Query: 178 MLRLAQALREERLQMKLAEVKTVF-----GTTTTTTTTFPGGGR 214
           MLRLA ALREERLQMKLAEVKTVF        + TTTTFPGGGR
Sbjct: 121 MLRLAPALREERLQMKLAEVKTVFEHMLSQLQSETTTTFPGGGR 163

[Close]

BLAST of Carg08531 vs. ExPASy TrEMBL
Match: A0A6J1DRL7 (protein BRANCHLESS TRICHOME OS=Momordica charantia OX=3673 GN=LOC111023636 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.3e-38
Identity = 137/341 (40.18%), Postives = 171/341 (50.15%), Query Frame = 0


Query: 26  LPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEEEMM----------MNNDTSPRWKLY 85
           LP + + Q++ K+ K S  K+++++E ++ EDMEE MM          +++ T P WKLY
Sbjct: 3   LPHYLSSQKRGKK-KSSRKKKKKKKELQKVEDMEETMMKTDPSPDHKPISDSTFPSWKLY 62

Query: 86  ENPFYINTPPHES-------------------------STTNINPFKRRMDSELHLALNH 145
           ENPFYIN PPH                           S  ++ P K RMDSEL LA + 
Sbjct: 63  ENPFYIN-PPHPQILHKSAINKHLHYCLKLASASSSSFSLCDLIPSKSRMDSELDLARSQ 122

Query: 146 ILELQTQLCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPH---- 205
           I EL+T+L YERKARKK+ESLAKRL +EL+EERK R+AMEG+C +LAT IS HQ      
Sbjct: 123 IAELKTELRYERKARKKMESLAKRLARELDEERKGREAMEGLCQDLATQISSHQAQIDLM 182

Query: 206 -KEIQEERNMLRLAQALREERLQMKLAEVKTVF--------------GTTTTTTTTFPG- 245
            KEI++ER MLRLA+ LREER+QMKLAEVK VF               T + + T F G 
Sbjct: 183 KKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEDMLSELEAGSSNNNTFSDSITKFSGR 242

[Close]

BLAST of Carg08531 vs. ExPASy TrEMBL
Match: A0A0A0KK85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36
Identity = 126/322 (39.13%), Postives = 151/322 (46.89%), Query Frame = 0


Query: 60  EEMMMNNDTSPRWKLYENPFYINTPPH--------------------------------- 119
           E+ M+++  SP WKLYENPFYI TP H                                 
Sbjct: 2   EDEMIDDTNSPSWKLYENPFYI-TPSHHHHHRHHRHQTSHKSSINTNNNNQLQFYCLKFS 61

Query: 120 ESSTTNINPFKRRMDSELHLALNHILELQTQLCYERKARKKVESLAKRLLKELNEERKQR 179
            SS++++ P KRRMDSEL LA + I+EL+TQL YERKARKK+ESL KRL KEL+EERKQR
Sbjct: 62  SSSSSDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQR 121

Query: 180 KAMEGVCHELATHISPHQPH-----KEIQEERNMLRLAQALREERLQMKLAEVKTVF--- 239
           +AMEG+C ELA  IS H+       KEI++ER MLRLA+ LREER+QMKLAEVK VF   
Sbjct: 122 EAMEGLCQELAREISSHEAQMDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM 181

Query: 240 -------------GTTTTTTTTFPGG---------------------------------- 245
                         TTTTTT  FP                                    
Sbjct: 182 LSEIESGTSTTTNNTTTTTTAIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM 241

[Close]

BLAST of Carg08531 vs. ExPASy TrEMBL
Match: A0A1S3AUL6 (protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35
Identity = 140/360 (38.89%), Postives = 164/360 (45.56%), Query Frame = 0


Query: 29  FFAKQEKEKESKHSTIKEEEEEEEERGE------DMEEEMMMNNDTSPRWKLYENPFYIN 88
           FF K +KEK+ K    +        R        DME+EM  +N  SP WKLYENPFYI 
Sbjct: 17  FFHKHKKEKKKKVKRPRRSRRRRRRRRRRGGDQLDMEDEMNDDNTNSPSWKLYENPFYI- 76

Query: 89  TPPH------------------------------------ESSTTNINPFKRRMDSELHL 148
           TP H                                     S++ ++ P KRRMDSEL L
Sbjct: 77  TPSHHHHHRHHRHQTSHKSSINTNNNNQLQFYCLKFSSSSSSNSCDLFPTKRRMDSELDL 136

Query: 149 ALNHILELQTQLCYERKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPH 208
           A + I+EL+TQL YERKARKK+ESL KRL KEL+EERKQR+AMEG+C ELA  IS H+  
Sbjct: 137 ARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELAREISSHEAQ 196

Query: 209 -----KEIQEERNMLRLAQALREERLQMKLAEVKTVF---------GTT----TTTTTTF 245
                KEI++ER MLRLA+ LREER+QMKLAEVK VF         GTT    TTTT  F
Sbjct: 197 IDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTNNNTTTTAIF 256

[Close]

BLAST of Carg08531 vs. TAIR 10
Match: AT1G64690.1 (branchless trichome )

HSP 1 Score: 81.6 bits (200), Expect = 9.3e-16
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 72  WKLYENPFYINTPPHE------SSTTNINPFKRRMDSELHLALNHILELQTQLCYERKAR 131
           WKLYENP+Y ++   +      +   ++N  K  M+SEL  A + I EL+ +L YERKAR
Sbjct: 39  WKLYENPYYCSSQSQQHQHQRKAFIWDLNFIKVFMESELGKAQDEIKELKAELDYERKAR 98

Query: 132 KKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQPH-----KEIQEERNMLRLAQ 191
           ++ E + K+L K++ EER  R+A E     L   +S  +       ++++EER M RLA+
Sbjct: 99  RRAELMIKKLAKDVEEERMAREAEEMQNKRLFKELSSEKSEMVRMKRDLEEERQMHRLAE 158

Query: 192 ALREERLQMKLAEVK 196
            LREER+QMKL + +
Sbjct: 159 VLREERVQMKLMDAR 173

[Close]

BLAST of Carg08531 vs. TAIR 10
Match: AT3G11590.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 9.3e-08
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 117 QLCYERKARKKVESLAKRL--------------LKELNEERKQRKAMEGVCHELATHISP 176
           +L  ERK R++ ESL K+L              +KE+  E++ R  +E VC ELA  IS 
Sbjct: 317 ELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEIENEKRARVMVEKVCDELARDISE 376

Query: 177 HQPH------------KEIQEERNMLRLAQALREERLQMKLAEVK 196
            +              +E+++ER ML+LA ALREER+QMKL+E K
Sbjct: 377 DKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAK 421

[Close]

BLAST of Carg08531 vs. TAIR 10
Match: AT5G22310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 87  ESSTTNINPFKRRMDSELHLALNHILELQTQLCYERKARKKVESLAKRLLKELNE----- 146
           + + +++      +D E       I  LQ +   ERK R++ E + +RL +EL E     
Sbjct: 222 DRARSSLKHLMSELDEEEEEKRRLIESLQEEAMVERKLRRRTEKMNRRLGRELTEAKETE 281

Query: 147 ---------ERKQRKAMEGVCHELATHISPHQPHKEIQEERNMLRLAQALREERLQMKLA 199
                    E++ +  +E VC EL   I   +  KE+++ER M+ +A  LREER+QMKL 
Sbjct: 282 RKMKEEMKREKRAKDVLEEVCDELTKGIGDDK--KEMEKEREMMHIADVLREERVQMKLT 341

[Close]

BLAST of Carg08531 vs. TAIR 10
Match: AT1G50660.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 3.7e-04
Identity = 56/206 (27.18%), Postives = 89/206 (43.20%), Query Frame = 0


Query: 5   CEINKEEVHVTWSQW---TYHYNPLPSFFAKQEKEKESKHSTIKEEEEEEEERGEDMEEE 64
           C    EEVH  +S         N + S  +  E E E  H+ I++ E E+    + +E+ 
Sbjct: 212 CLDTMEEVHQIYSNMKRIDQQVNAV-SLVSSLEAELEEAHARIEDLESEKRSHKKKLEQF 271

Query: 65  MMMNNDTSPRWKLYENPFYINTPPHESSTTNINPFKRRMDSELHLALNHILELQTQLCYE 124
           +   ++    W+  E         HE     I+  K  M+ E        LE+       
Sbjct: 272 LRKVSEERAAWRSRE---------HEKVRAIIDDMKTDMNRE--KKTRQRLEIVNHKLVN 331

Query: 125 RKARKKVESLAKRLLKELNEERKQRKAMEGVCHELATHISPHQP------------HKEI 184
             A  K+    KR +++  +ERK R+ +E VC ELA  I   +              +E+
Sbjct: 332 ELADSKL--AVKRYMQDYEKERKARELIEEVCDELAKEIGEDKAEIEALKRESMSLREEV 391

Query: 185 QEERNMLRLAQALREERLQMKLAEVK 196
            +ER ML++A+  REER+QMKL + K
Sbjct: 392 DDERRMLQMAEVWREERVQMKLIDAK 403

The following BLAST results are available for this feature:

BLAST of Carg08531 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035518.1	1.4e-130	100.00	Protein BRANCHLESS TRICHOME, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6605607.1	8.9e-77	98.72	Protein BRANCHLESS TRICHOME, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022958455.1	2.0e-73	96.15	protein BRANCHLESS TRICHOME-like [Cucurbita moschata]	[more]
XP_023533024.1	7.3e-71	92.41	protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995873.1	1.2e-62	85.37	protein BRANCHLESS TRICHOME-like [Cucurbita maxima]	[more]

BLAST of Carg08531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I878	1.3e-14	39.26	Protein BRANCHLESS TRICHOME OS=Arabidopsis thaliana OX=3702 GN=BLT PE=1 SV=1	[more]

BLAST of Carg08531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3H2	9.9e-74	96.15	protein BRANCHLESS TRICHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111459676 P...	[more]
A0A6J1K999	6.0e-63	85.37	protein BRANCHLESS TRICHOME-like OS=Cucurbita maxima OX=3661 GN=LOC111491271 PE=...	[more]
A0A6J1DRL7	2.3e-38	40.18	protein BRANCHLESS TRICHOME OS=Momordica charantia OX=3673 GN=LOC111023636 PE=4 ...	[more]
A0A0A0KK85	2.8e-36	39.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1	[more]
A0A1S3AUL6	1.4e-35	38.89	protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1	[more]

BLAST of Carg08531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64690.1	9.3e-16	39.26	branchless trichome	[more]
AT3G11590.1	9.3e-08	39.05	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT5G22310.1	1.6e-07	31.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G50660.1	3.7e-04	27.18	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..61
None	No IPR available	COILS	Coil	Coil	coord: 125..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..61
IPR043424	Protein BRANCHLESS TRICHOME-like	PANTHER	PTHR31071	GB\|AAF24581.1	coord: 50..198
IPR040209	Protein BRANCHLESS TRICHOME	PANTHER	PTHR31071:SF39	PROTEIN BRANCHLESS TRICHOME	coord: 50..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08531-RA	Carg08531-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010091	trichome branching