
Carg08373 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGGTGGGGATTTGTGCAAGAAAGAATCGGACAACAGAGAGAGCTTCATCTGTCTCATTTCTGTGTGAGCTGTGCGTTCCTTTGTATTCATCTCTGTTCTTGCTTCTCTCAGCCACCCATCACAGGAATTGCTCAAACAATCCAACCCTTTAGCTCCCCGCCACCAACATTTGATTTCCCGATTTTGATCTTTGATTTCTTAACCCTTTTCTTTCTTATTTCATCGTCTTTGCTCTGTTTTTTCTACGCCTCCGGTTTGCCCTCTTATCCCTCGATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGTTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACGTACGTCTTTTACTCTTTGTTTGATTTGGGGGTTTTCCCCTTCTTTTTCTTTCTCTCGATGTTTAATTGAATTCTGTTTTGATTTGTTGTGGAGGATGTTTTGTTCTAATGATTTGGTGTTCTGGGTTCGTTTTATTTGAGTCTGGAATGATCTGTTTATGATGATTCGTTTTAATCTTAGTTTCTTATTCTATGTCTAAGTTGAATGAGTTTCTACTATAGTGATGGTTCAAGAACCTTAAATTTTATCTGCCCTGGATTCTACAAGTTTGTGTGCTTACTGGGTTTAGAGGGATTCTACAAGTTTCTCCTATATTGATACTCATTTTGGTTTATGATTTCAGAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGGTAGGATACTGAATTTAACCAAATTATGCCATCAAAATATCATAATGGAATGGTAATTAGGATACTTTGATGATAAGCCTGATGTTTAAGAACAGTGACAACTGACCATTAGTCTTGTTTGCTAGTTAAGCTATGATTATACATTGACTTATATGAACCTATGGCTCTACTTTTATAAATCATAGTAACAAGTGTTGTTTTTTTCGGTCGATAATTAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCTCTTCGATGGGTGAATTTAAACGAGGAAGAATGTGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTTTGTGTTGTTCTTCAGCAAATGAGGAAGAATGCAACGATTTGGCTACACTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTAATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGGTGAGCATGGCAGGGAACACGAATACCATATATTTTGTTCGGTGTAATTGTGCTCTTATGCGCTCCGAACGAAATGTAACTGTAACTGACCGTTTTTTCTATCAGTTCTTTGGTAGGGTTCAGCAGGGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGGTGAGTTTCTAATTTTCTCGAGGATGTGCGGTGTTCGAGTTTTAGAAATTTACGAAATTTTGATTTGATTTGGAGTATGTTATTTATGTGTAGACAGTTTTTAGTCCAAGAAATTATGTGGTTTTTTATTTACTTTCTTTCTGATTAATTGACAATGTTTGGGGAGATTTTAGTTGTATAATGCTTGACTAACTCTCTCTTATATTGTAAGGACCAAGTCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTTAGGCTTCCCTCAAGGTTTCTAAAACGCTTCTGTTGAGGAGAAGTTTCCACACATGTTTTGTTCTCCTTCCCAACCGATGTGGGATCTCACAATCCACTCCCCTTCGGGGTCCAGCGTCCTCGCTGACATTCGTTCCCTTCCCAAATCCATGTGGGACCCCCCCAATCCACTCTCCTTCGGGGTCCAGCATCCTTGTTGGCACACCGTCTCATGTGCACCCTACTTTGGGGCTCAGCCTCCTCACTGGCACATCATCCAGTGTCTAGCTTTGATACCATTTGTAACGGCCCAAGTTCACCGCTAGTAGATATTGTCCTCCTTGCGCTTTCCCTTTCAGGTTTCCCTCAAGGTTTTTTAAAACGCGTTTGCTAAAGAGAGGTTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAATTGACGTAGACTTCAGCTTGCTTGTCTTTGTGCTATTTTTTAGAGGGGGTGAAAAATGTGTGGGGGAGTTGTGATCCTTATCAGATTTTATCAAACAATGTAGGAGCAAGACAAAGGATTGCCCTAGGTTCCATTGATGGGTGAAGAGGGTAATGAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGACTGACAGCGATACATAACGGGCCAAAGCTTTGTGGAGGAGGTGTGAAAGCTAGCAGATATTGTTCACTTTGGCTCATTACGTATCGCCGTCAGTCTCACGGTTTTAAAACACATCTACTAGGGAAGTTCTCACACCTCTATAAGGAATGTTTTGTTCCCCTCTCCAACCGACGTGAGATCTCACATCTTCCAAGCCAAGAACAAGAGAGGTATTCCCCACAATGGGTGGCTTCGTGAAATCCTAGGTTCAAAGCTTCTGGGTGCAAAACGCAATCACTTAAAACACTGATTACCTTACATAGTTGGCTATTAGGTAGGTGCCTTCCCAAAAATTAGGAGGATTGGTCATGAGCATAATGCAAGAATGGGGCCTGCTAATACATTATAATGAGAATCTCAGCTGATGGTACCTTTTCTTTTTTCACTTATTGTTTTTGTGTTGGCATTAGACTAACTTCTACCCTGTTTATGTTACAGTGCCCATTGTCTTTTATTCAGCTTGAGACGTCGATTTCAGTGTATAGACAACATGTTCGATCACAACAGGTATGTACTTATATTCTGTGTTTTATATACGTTGTAAGGCTTGAACATACGTTGCCTGACTGTAGGTGACGCGAGTCCAAACTCACTAAATGTTGAGAGTGTGCTACCCAATCGCAAAGTCCACTTCCAAGAAAAGTGCTATTGTGACACGTAGTAGAGTGTGTTAAAAGACTAAATAGACACAAATCTCAAGCTTTAAGAACTAAACTTGTAAATGAACCAAAAACATAATGAATGCTGGAATTTTCATCCATTTTTTGCAACCTCTGAATGTAGCTCATTATTTATTGACATGAAATGGAGCTGCTCCACAGGTGTTGAACAGGCGTTTGAAGAAAAATAACATAAACATTCATGTTCTTCTTCTGAGTTCCATGCCTTGCTTAAGCTCAAAATGGGAACAAGCAAGGTATGTATTCATTATTGCTGCGGCTTCAAAGTTTGTAAATGTCTGGTTGAATCGTTAAATATTACAGAGAACATTGGCAGTGTATATCGTTGCTGTGAAATCAATTTAAATCCCTTTTCAGATGATTTTCCCATAGATCTTGAATCATTATTAATGCTACTTTCATTTTGTTCATTTGTGGAGTTTTATTCACCGTATCTAACAAATGTGATTATGATTATTCGCTGTTTGTTTGTTCGTTTGTAAGGGTTGGCTTGGACTAGTTAGTGTTGCTGCCCTCGTGTCGAGGGCAGCAGGGCAGCGTACTTAATAATGAAGTCTTTGTGGTTGAGCCACCAAAAAGGATGGAGAATCTTATTGGGTATAGG AGAAGGTGGGGATTTGTGCAAGAAAGAATCGGACAACAGAGAGAGCTTCATCTGTCTCATTTCTGTGTGAGCTGTGCGTTCCTTTGTATTCATCTCTGTTCTTGCTTCTCTCAGCCACCCATCACAGGAATTGCTCAAACAATCCAACCCTTTAGCTCCCCGCCACCAACATTTGATTTCCCGATTTTGATCTTTGATTTCTTAACCCTTTTCTTTCTTATTTCATCGTCTTTGCTCTGTTTTTTCTACGCCTCCGGTTTGCCCTCTTATCCCTCGATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGTTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCTCTTCGATGGGTGAATTTAAACGAGGAAGAATGTGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTTTGTGTTGTTCTTCAGCAAATGAGGAAGAATGCAACGATTTGGCTACACTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTAATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGTTCTTTGGTAGGGTTCAGCAGGGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGTGCCCATTGTCTTTTATTCAGCTTGAGACGTCGATTTCAGTGTATAGACAACATGTTCGATCACAACAGGTGTTGAACAGGCGTTTGAAGAAAAATAACATAAACATTCATGTTCTTCTTCTGAGTTCCATGCCTTGCTTAAGCTCAAAATGGGAACAAGCAAGGTATGTATTCATTATTGCTGCGGCTTCAAAGTTTGTAAATGTCTGGTTGAATCGTTAAATATTACAGAGAACATTGGCAGTGTATATCGTTGCTGTGAAATCAATTTAAATCCCTTTTCAGATGATTTTCCCATAGATCTTGAATCATTATTAATGCTACTTTCATTTTGTTCATTTGTGGAGTTTTATTCACCGTATCTAACAAATGTGATTATGATTATTCGCTGTTTGTTTGTTCGTTTGTAAGGGTTGGCTTGGACTAGTTAGTGTTGCTGCCCTCGTGTCGAGGGCAGCAGGGCAGCGTACTTAATAATGAAGTCTTTGTGGTTGAGCCACCAAAAAGGATGGAGAATCTTATTGGGTATAGG AGAAGGTGGGGATTTGTGCAAGAAAGAATCGGACAACAGAGAGAGCTTCATCTGTCTCATTTCTGTGTGAGCTGTGCGTTCCTTTGTATTCATCTCTGTTCTTGCTTCTCTCAGCCACCCATCACAGGAATTGCTCAAACAATCCAACCCTTTAGCTCCCCGCCACCAACATTTGATTTCCCGATTTTGATCTTTGATTTCTTAACCCTTTTCTTTCTTATTTCATCGTCTTTGCTCTGTTTTTTCTACGCCTCCGGTTTGCCCTCTTATCCCTCGATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGTTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCTCTTCGATGGGTGAATTTAAACGAGGAAGAATGTGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTTTGTGTTGTTCTTCAGCAAATGAGGAAGAATGCAACGATTTGGCTACACTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTAATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGTTCTTTGGTAGGGTTCAGCAGGGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGTGCCCATTGTCTTTTATTCAGCTTGA RRWGFVQERIGQQRELHLSHFCVSCAFLCIHLCSCFSQPPITGIAQTIQPFSSPPPTFDFPILIFDFLTLFFLISSSLLCFFYASGLPSYPSMLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALGTAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLRWVNLNEEECDDLATFLSGTCQVPRSAKTESSLCCSSANEEECNDLATLRRVDDGLCKMDRSTKARRASSPSAPNLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQFFGRVQQGQIYRPWHLQLACSVQFTLALMLTIFLIVPIVFYSA Homology
BLAST of Carg08373 vs. NCBI nr
Match: KAG7029807.1 (hypothetical protein SDJN02_08150, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 737.3 bits (1902), Expect = 6.7e-209 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
BLAST of Carg08373 vs. NCBI nr
Match: XP_022929665.1 (uncharacterized protein LOC111436178 [Cucurbita moschata]) HSP 1 Score: 539.3 bits (1388), Expect = 2.7e-149 Identity = 273/279 (97.85%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Carg08373 vs. NCBI nr
Match: XP_023545458.1 (uncharacterized protein LOC111804881 [Cucurbita pepo subsp. pepo] >XP_023545539.1 uncharacterized protein LOC111804937 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 538.5 bits (1386), Expect = 4.5e-149 Identity = 273/279 (97.85%), Postives = 276/279 (98.92%), Query Frame = 0
BLAST of Carg08373 vs. NCBI nr
Match: KAG6598866.1 (hypothetical protein SDJN03_08644, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 471.1 bits (1211), Expect = 8.9e-129 Identity = 247/279 (88.53%), Postives = 250/279 (89.61%), Query Frame = 0
BLAST of Carg08373 vs. NCBI nr
Match: XP_038891183.1 (uncharacterized protein LOC120080557 [Benincasa hispida]) HSP 1 Score: 454.9 bits (1169), Expect = 6.6e-124 Identity = 244/322 (75.78%), Postives = 260/322 (80.75%), Query Frame = 0
BLAST of Carg08373 vs. ExPASy TrEMBL
Match: A0A6J1EUZ9 (uncharacterized protein LOC111436178 OS=Cucurbita moschata OX=3662 GN=LOC111436178 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149 Identity = 273/279 (97.85%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Carg08373 vs. ExPASy TrEMBL
Match: A0A0A0LMD6 (Syntaxin-6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058690 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 7.1e-124 Identity = 244/322 (75.78%), Postives = 259/322 (80.43%), Query Frame = 0
BLAST of Carg08373 vs. ExPASy TrEMBL
Match: A0A1S4E2P6 (uncharacterized protein LOC103492935 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 5.7e-121 Identity = 243/325 (74.77%), Postives = 259/325 (79.69%), Query Frame = 0
BLAST of Carg08373 vs. ExPASy TrEMBL
Match: A0A1S3BS56 (uncharacterized protein LOC103492935 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 2.0e-118 Identity = 235/314 (74.84%), Postives = 251/314 (79.94%), Query Frame = 0
BLAST of Carg08373 vs. ExPASy TrEMBL
Match: A0A1S4E2P4 (uncharacterized protein LOC103492935 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 8.4e-117 Identity = 235/317 (74.13%), Postives = 251/317 (79.18%), Query Frame = 0
BLAST of Carg08373 vs. TAIR 10
Match: AT4G30240.1 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 186.4 bits (472), Expect = 4.1e-47 Identity = 118/300 (39.33%), Postives = 174/300 (58.00%), Query Frame = 0
BLAST of Carg08373 vs. TAIR 10
Match: AT2G18860.1 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46 Identity = 123/304 (40.46%), Postives = 174/304 (57.24%), Query Frame = 0
BLAST of Carg08373 vs. TAIR 10
Match: AT2G18860.2 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 143.7 bits (361), Expect = 3.0e-34 Identity = 103/276 (37.32%), Postives = 150/276 (54.35%), Query Frame = 0
BLAST of Carg08373 vs. TAIR 10
Match: AT1G27700.1 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-30 Identity = 73/176 (41.48%), Postives = 104/176 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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