Carg08365 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08365
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ADP-ribosylation factor 1-like
Location	Carg_Chr05: 3677437 .. 3682475 (+)
RNA-Seq Expression	Carg08365
Synteny	Carg08365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTGAGCTCTGCGTTGAGATCTGATCCCTATCTATCTTCCTATCTATAACACAACACATCATTCTGTGCGCACCATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTGTACGTTTTTTTTTTAAAATTATCTTTTCTGCTTACATTTTGTGATGTGTTGGGTTTTTGTGATATCTGGATGGAGACTTGGCGCCATTTTGTGATGGATTCTTTTCAAAATTGTGCAGATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAAGTTGGTATTCTTTCCAAATGTGATCTTGTGGTTCTCTTTGTAATTATAATTTGATATGTGGGATACAAAACATTTCCCTAATTAAGGCTATGAGAATTAAAATTTGAATTTTCGGCATTCAAGTTTAAGAGATTGGGTGGAATTGCCACGATAGTTGCTGCATTAGTTTTGTAGATCATTTAATACTGTTCGGATTAGAAACAATGGTTGCCTCCTTCATTCTCTTTGGAGATTTCTGTAGTTCGAATTTTTTGTTTTCCCCATACTTTTTGTGTTCTTCTTTCTGTGGGCTCTCCATCCCATTTGGAGAAAGACAATGATCGGAAATTACATCTTGAATGTTAAAATTCAACCACAAGAAGCATAGGCATCTACTTTTGTTTTTTCAATTGTTTAATTGTAAATACTGAAAAGTTGATTGGAAACAACTGTGGGGAGGCCATAGATCTAGATTCCTTAAAATGATGAATTCAAACTATAGTAGTTTTGTTGTGAATTTACCATGAGAATTTTCTTTGAATGAGTTCTTTTACGTGGAAATATCAAACTAGGTTCTGCATAATCGTTTGCTTTAGATTTGTTAGTTTGTAGGTTTATATGCTGTTCCTTTTTTTTTTTTCCTTCTGTTACTAATTTATGAGTGGTTTCACTTATAGAGTTTTGTAAATTTTGTGGGGTATTTTTCTTTGTGTACCCACAAAGTTCTTTGATGTTCCTAATACCTTCTTGTTACAGTATATTTCATATTTCTTAGTGGAAGTTTCATAAGTGAAAAGCTGAATTGAAAACAATTGTTTCTTGCATCGACTTTCCTTCAGCTATTGTTCAAATATCGTATAAACTATATCCATTTTGTATGCAGCAATTGGGTTTAATGTTGAAACTGTGCAGTACAACAACATCAAATTCCAGGTCTGGGATCTTGGTAAGCCAATCTAGGTCCTGATATCTTTTAGGGAAGAAATGTGATCTCATGTTGTATTATTTTCTCCATGATTACTCTTATGAGATTGCAACACACTCGAGAGAGAGAGAGAGAGAGAAAGAGAGAGGCATGCATTGTTCTGCTAAATTGATAAATAGGTTATGCAGGTTTATGTTTCTTATAAAAACAAAAAACAAAGAAAGATTGTGCAAATTTGTAATGATTTTATTCTAAATTCTACATACATGCGATTCAGCATGAAAATTAATTTCATATTAATAACATTAATGTTATAAAGCATTTGATAATACTAATTTCTTTAATAAAAAAAATTGTTATAGGAACCATTTTCATTGGGGGGACGGGTGGGGGGGATTATTCTAGCCATATGTGTGTTTGATTGCATGTCCATGCTTTTTTACTATGACAATCTTATCGACTTGGGGCAAGTATTAGCTTCGATTATTTTGTCGAATCCATCCAAGCATCTTGGTTATGTCATTAATAGCTTTTCGTTGTCTGTAATGCAGGAGGACAGACTAGTATCAGGTTAGTCTTGTCCTTTTATCAGTTTTTGGATAGTTTCCTCAAAAGTTGAAATTTGATATGTTTTCTAGCTTTTCTTTCCAATGCTTGGTTAAAATCTCTAGCTTGTAGAAACAATATCTGGTAAATATTAGGAAAGACAGGGTCGAATATAATCTGTTCAACAAAAAAGAAAGTTGTTTAAGCAGGTAAAGGCATGTAGGTGGTTGTATATTGAAATTAATGATATTGCATAACATATGCAAACTTGGAAGGTTGTAAGAGTAGAAATTCATCTCAGGTTGTCATTTTTGTTTTTTGGTTCTCTCTCTCTCTCTCTCGTCCTTAATGGATAATAGCTTATAATTTTGTTATTTATTATCAAATGCTCATGATGGTTTTTTCCCCTAATTTTTATTAATAACGTATGAAAAAAAAAAAAAAAAAAAAACTCTATATTTTACTAGAATTGTTAAGACACTCTTAAATTTGGATAGTCAGCTCTCTCTTGTCTGTGAATTTCTTTGTCCTGCACTCCTGAATGAGATACGATGCTCTTTTTTTAATTTTCTCCCCCAAATATTTAAGCTGGTGCTCCCCCTGGCTCCCGCATCCATTTCCCAGATTGATGGTTTTCTCAGCTGGGAGGAGAGTACCATATATATATATATATATATAGATAGATAGATATATTTAATCAAAAGATAGGATAGGAGGATACTTTTCTTTTATTTTTTTCTTCATCATTTTTCCTTCTAAATGAAGACTTATTATGTTTCAACTGATAATTATGATAATGTAATTTAATAATCGTTCCAATAGTGCTTTTCAAGAAGCTATTTGATTGCACACTTACAGTAATACCAAATTCTGAAAGAGCACGAATTTGAACTTTATTTGGTTCTTAGGAAATAGGACCGTGTGATTTACTGTTAGCTTACATGATTACTGTTGTACGGATATCACATTCTGTGGAAGCTTGTCTCTGTGTCTGGTCTAAATTGAGATCCATGTCTGGTTTTTCCTTTAATGTCTTTATTTTTGGAAATACTCTTGAATTTAAATTTCTTATTCACCCTTCTGTTCTTTTGATAATGAAAATATTCCATCTATTCTTTACCCAAACTAACTTATGTCACAGAGTTTCCTTCCGCAGATAGTAGTCTTGGGTTATTCCAGAAAGAAACAGGAAGTGGATACTTGACCTTGTTCATTTGAGCCTGTATCAGACTTCATAAATAGACTCTCTCATGTCATGTGTCAACAATACATTGTTTTTGAAGTTGACTAATATGTGTATTTGTGACTTGATGTATACTTCAGCCCATCTATATTCTACCTGTTTATTTACTATAATTGGCTCCTTAAACTTTTCATTCTCCTTCATTTTTCTTTTCTCCTCTTTTTAAATTGTTCAAGCTAATTAGTTGCTTGCCTTGTGTCGTAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGTACAATATGGTCGGCACTTGTTACAGAGTTGGTAAACAAAATGTAGAATTTGTCATACCTGACCTTGTGTGTTTCTGAAATTTGGAAATAAAGTCTAATGATTAGTTATATTGTCAAATTATGCATTTTAGTATATAAGGTTTATGGTTTTATTTGATGCCGAGTAAAATCTCAATTCTGCGTTAATGAAATACATCATCAAGAGCGTGGATTGTATCTGGTTCCTAGATGGCAATACTCAGTAGTAGTATGTTTGCGTCACTATACTTTTCCTTCAGTTTCAAAAGTCCTTCTGCACAAGAAATAAATTGAACGTGTCTGAACTGTCCACATTTTTTTTAGGAAGTATTGAGCTTGTAATAGTTTTGTAAGTTTGTTTATTAGTCAAGTTTACTGTTTTCAATTTTCAGTCGATTTTTGTCAGCCAGTTCCAATAGTTTTTCTTCTGTGTGTTTGTTCAGGAAGAAGAGTTGCGGGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGTTAGTGCTGTTGCCGATTATTTATATTGTTAGCATTTTTGGTCAGAAAATAGAATCCAATAGACTTTGAATCTGATAGTTGAAGTACGCATATGCAATTGGGCTTAAATAGTAGGATTTAAGGATTTGTTTGTATGTGTTTTGGAAAGTACGCAAAAAATATCATTTTATCTTTTTTGTTTTAGAAAAACCGTTCGGAACTATTTTTCTTTCTAGTGTTTATTTACCTTTTATTTTATTTATTTAAATACATTATTTAGTTTCCTTTTGAGTTCATCAATATGGAGTGTGATGGGATGGATTGTGAACCTTTGACCTTTTAGTTGAGAATACACATGTTTTTTTTTTTTTTTTTTTTTGTCAGCTGAGGTACGTTCATGTTGATACATTATTAAGTTTAGCAACTACGAAATGTGAAATTGAATCGTATGTGGAGAGTTATTGTAACAAATACTGGAAACAGTAATTCTTAGTTCTTTCAGAAAATAATTGAAAACATTAAAACCTTATCTCTCATTTTATCATTTCCCCGATAAATTTCTCAACTCAAGTTTTGTGAGTTTGAAAACTGTGTAGCTGTTTCTCAAAACAACGGAAGGTCCAAGACCAAGCATTTGTGATTGTGTGTCTGAGGTGTTTTGAAGGCTTGTATAAAATGTTTAGTACAAATGGTTAATGCAGTTTCTATTTTTCTATCTTTTCTACATATTATCTTCCCATCGGTATAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTAAGTACAAAGTTATACTTTACATCTGTTTTTTTTTTTTTTGGTTTTTTTAATCATTCCAGAAACTTTAGTAATTAGACCCTCCCCGACCACCTAAATGCGTTGTTTTGTTTGACATAGTCGACCCAATCTTGTGAATTTATTTTTGGATACCTTTGTTCGATATTGAATGAATTTGTTCTTGAAATGCTAGGAACAGCATTGTCAGTCAGAGCTACGTTCTTAAACGATTTCACTTTTTTTACAGCCTTCTTTTATTTAGTTTAACCGGTTAACGTGCTAATTCAGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAA

mRNA sequence

ATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAAGAGGACAGACTAGTATCAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGGGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAA

Coding sequence (CDS)

ATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAAGAGGACAGACTAGTATCAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGGGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAA

Protein sequence

MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG

Homology

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BLAST of Carg08365 vs. NCBI nr
Match: KAG7029799.1 (ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 2.4e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAI 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAI
Sbjct: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAI 60

Query: 61  IYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKI 120
           IYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKI
Sbjct: 61  IYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKI 120

Query: 121 KNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           KNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 121 KNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 154

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BLAST of Carg08365 vs. NCBI nr
Match: GAY48427.1 (hypothetical protein CUMW_111580 [Citrus unshiu])

HSP 1 Score: 295.0 bits (754), Expect = 3.6e-76
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAI 60
           +FSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP GQTSIRPYWRCYFPNTQAI
Sbjct: 8   LFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPSGQTSIRPYWRCYFPNTQAI 67

Query: 61  IYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKI 120
           IYVVDSSDT+RLV+AK+EFHAILEEEELRGAV L+FANKQDLPGALDDAAVTEALELHKI
Sbjct: 68  IYVVDSSDTERLVIAKDEFHAILEEEELRGAVVLIFANKQDLPGALDDAAVTEALELHKI 127

Query: 121 KNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           KNRQWAIFK SAIKGEGLFEGLDWLSNTLKS GG
Sbjct: 128 KNRQWAIFKTSAIKGEGLFEGLDWLSNTLKSIGG 161

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BLAST of Carg08365 vs. NCBI nr
Match: XP_022997467.1 (ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997468.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997469.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >KAG6598858.1 ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 153/175 (87.43%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 182

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BLAST of Carg08365 vs. NCBI nr
Match: XP_022153337.1 (ADP-ribosylation factor 1 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLK+GGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKAGGG 182

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BLAST of Carg08365 vs. NCBI nr
Match: XP_004149069.1 (ADP-ribosylation factor 1 [Cucumis sativus] >XP_008452088.1 PREDICTED: ADP-ribosylation factor 1 [Cucumis melo] >XP_038890939.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890940.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890941.1 ADP-ribosylation factor 1 [Benincasa hispida] >KGN61108.1 hypothetical protein Csa_021187 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 182

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BLAST of Carg08365 vs. ExPASy Swiss-Prot
Match: Q96361 (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARF1 PE=2 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 6.0e-74
Identity = 141/175 (80.57%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEEEEL+GAV L+FANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDWLSNTLKSG G
Sbjct: 128 QDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGSG 182

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BLAST of Carg08365 vs. ExPASy Swiss-Prot
Match: P40940 (ADP-ribosylation factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-73
Identity = 140/175 (80.00%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEE+EL+GAV L+FANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDWLSNTLKSG G
Sbjct: 128 QDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGSG 182

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BLAST of Carg08365 vs. ExPASy Swiss-Prot
Match: P61211 (ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-47
Identity = 97/172 (56.40%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIP                    
Sbjct: 8   IFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+ +VFANK
Sbjct: 68  LGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKS 152
           QD+  A+  + +  AL L  +K+R+W IFK SA KG GL E ++WL  TLKS
Sbjct: 128 QDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS 179

[Close]

BLAST of Carg08365 vs. ExPASy Swiss-Prot
Match: P61212 (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-47
Identity = 97/172 (56.40%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIP                    
Sbjct: 8   IFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+ +VFANK
Sbjct: 68  LGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKS 152
           QD+  A+  + +  AL L  +K+R+W IFK SA KG GL E ++WL  TLKS
Sbjct: 128 QDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS 179

[Close]

BLAST of Carg08365 vs. ExPASy Swiss-Prot
Match: P40616 (ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-47
Identity = 96/172 (55.81%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIP                    
Sbjct: 8   IFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+ +VFANK
Sbjct: 68  LGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKS 152
           QD+  A+  + +  +L L  +K+R+W IFK SA KG GL E ++WL  TLKS
Sbjct: 128 QDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS 179

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BLAST of Carg08365 vs. ExPASy TrEMBL
Match: A0A2H5P7T3 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_111580 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPRGQTSIRPYWRCYFPNTQAI 60
           +FSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP GQTSIRPYWRCYFPNTQAI
Sbjct: 8   LFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPSGQTSIRPYWRCYFPNTQAI 67

Query: 61  IYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKI 120
           IYVVDSSDT+RLV+AK+EFHAILEEEELRGAV L+FANKQDLPGALDDAAVTEALELHKI
Sbjct: 68  IYVVDSSDTERLVIAKDEFHAILEEEELRGAVVLIFANKQDLPGALDDAAVTEALELHKI 127

Query: 121 KNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           KNRQWAIFK SAIKGEGLFEGLDWLSNTLKS GG
Sbjct: 128 KNRQWAIFKTSAIKGEGLFEGLDWLSNTLKSIGG 161

[Close]

BLAST of Carg08365 vs. ExPASy TrEMBL
Match: A0A6J1KDZ9 (ADP-ribosylation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492376 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 153/175 (87.43%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 182

[Close]

BLAST of Carg08365 vs. ExPASy TrEMBL
Match: A0A0A0LH74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049970 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.7e-76
Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 182

[Close]

BLAST of Carg08365 vs. ExPASy TrEMBL
Match: A0A6J1DIL7 (ADP-ribosylation factor 1 OS=Momordica charantia OX=3673 GN=LOC111020854 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.7e-76
Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLK+GGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKAGGG 182

[Close]

BLAST of Carg08365 vs. ExPASy TrEMBL
Match: A0A1S3BT35 (ADP-ribosylation factor 1 OS=Cucumis melo OX=3656 GN=LOC103493197 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.7e-76
Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAVALVFANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAVALVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG
Sbjct: 128 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 182

[Close]

BLAST of Carg08365 vs. TAIR 10
Match: AT2G24765.1 (ADP-ribosylation factor 3 )

HSP 1 Score: 276.9 bits (707), Expect = 9.5e-75
Identity = 140/175 (80.00%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           MFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIP                    
Sbjct: 8   MFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQTSIRPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEE+EL+GAV L+FANK
Sbjct: 68  LGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG 155
           QDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDWLSNTLKSG G
Sbjct: 128 QDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGSG 182

[Close]

BLAST of Carg08365 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F )

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-46
Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIP                    
Sbjct: 8   LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQ  IRP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV LVFANK
Sbjct: 68  VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKS 152
           QDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDWLSN + S
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAS 179

[Close]

BLAST of Carg08365 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-46
Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIP                    
Sbjct: 8   LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQ  IRP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV LVFANK
Sbjct: 68  VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKS 152
           QDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDWLSN + S
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAS 179

[Close]

BLAST of Carg08365 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E )

HSP 1 Score: 181.4 bits (459), Expect = 5.5e-46
Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIP                    
Sbjct: 8   LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQ  IRP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV LVFANK
Sbjct: 68  VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTL 150
           QDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDWLSN +
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]

BLAST of Carg08365 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E )

HSP 1 Score: 181.4 bits (459), Expect = 5.5e-46
Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 1   MFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPR------------------- 60
           +FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIP                    
Sbjct: 8   LFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67

Query: 61  --GQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANK 120
             GQ  IRP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV LVFANK
Sbjct: 68  VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 127

Query: 121 QDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDWLSNTL 150
           QDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDWLSN +
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

The following BLAST results are available for this feature:

BLAST of Carg08365 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029799.1	2.4e-80	100.00	ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
GAY48427.1	3.6e-76	94.16	hypothetical protein CUMW_111580 [Citrus unshiu]	[more]
XP_022997467.1	6.2e-76	87.43	ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997468.1 ADP-ribosylati...	[more]
XP_022153337.1	1.4e-75	86.86	ADP-ribosylation factor 1 [Momordica charantia]	[more]
XP_004149069.1	1.4e-75	86.86	ADP-ribosylation factor 1 [Cucumis sativus] >XP_008452088.1 PREDICTED: ADP-ribos...	[more]

BLAST of Carg08365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96361	6.0e-74	80.57	ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARF1 PE...	[more]
P40940	1.3e-73	80.00	ADP-ribosylation factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2	[more]
P61211	2.2e-47	56.40	ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=...	[more]
P61212	2.2e-47	56.40	ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=...	[more]
P40616	3.7e-47	55.81	ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1	[more]

BLAST of Carg08365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H5P7T3	1.8e-76	94.16	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_111580 PE=4 SV=1	[more]
A0A6J1KDZ9	3.0e-76	87.43	ADP-ribosylation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492376 PE=3 ...	[more]
A0A0A0LH74	6.7e-76	86.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049970 PE=3 SV=1	[more]
A0A6J1DIL7	6.7e-76	86.86	ADP-ribosylation factor 1 OS=Momordica charantia OX=3673 GN=LOC111020854 PE=3 SV...	[more]
A0A1S3BT35	6.7e-76	86.86	ADP-ribosylation factor 1 OS=Cucumis melo OX=3656 GN=LOC103493197 PE=3 SV=1	[more]

BLAST of Carg08365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24765.1	9.5e-75	80.00	ADP-ribosylation factor 3	[more]
AT1G10630.1	3.2e-46	52.91	ADP-ribosylation factor A1F	[more]
AT2G47170.1	3.2e-46	52.91	Ras-related small GTP-binding family protein	[more]
AT3G62290.1	5.5e-46	52.94	ADP-ribosylation factor A1E	[more]
AT3G62290.2	5.5e-46	52.94	ADP-ribosylation factor A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 12..35 score: 56.86 coord: 123..147 score: 32.24
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 1..149 e-value: 1.1E-10 score: 51.5
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 2..40 e-value: 2.1E-12 score: 46.8 coord: 42..148 e-value: 1.9E-41 score: 141.4
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..153 e-value: 1.9E-57 score: 206.8
None	No IPR available	PANTHER	PTHR11711:SF380	ADP-RIBOSYLATION FACTOR 1	coord: 42..154
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 42..154
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..40
None	No IPR available	PANTHER	PTHR11711:SF380	ADP-RIBOSYLATION FACTOR 1	coord: 1..40
None	No IPR available	PROSITE	PS51417	ARF	coord: 4..149 score: 13.615511
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..40 e-value: 2.3E-11 score: 45.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 41..152 e-value: 2.7E-43 score: 149.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08365-RA	Carg08365-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0031683	G-protein beta/gamma-subunit complex binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding