Carg08326 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08326
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1997)
Location	Carg_Chr05: 3419162 .. 3422717 (+)
RNA-Seq Expression	Carg08326
Synteny	Carg08326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATGGACTCCCTCAATTTGCTTTTCTTAGTGCCATTTCCATAATTCTCATTCGGACAGTTCTTTGCAATCCGCCGCACACTTCAGAATTCCGGTCGCCGCTCTCCGCCGGCCAAGTGAGATTCCAAGCATAATTGATATTCTGAGCACGAAATTCCGCTCCAAGGTGAAGAAAAATGGTTTCTGTCTTGTATCTGGTACCTGATTCTTACTTTTGTTCTTTTGGCTTCCATATTTGTTCACTGTATTTCATTTCGCGAAAATGTGTTCGTAGAGAGGATGGTGGTTTTGGCTACCAAATGGCTCGGGCAAGGAAAATGCTCGTTTCCATTGCTTGCTACTCACAAGTTTAGTTCCCCGAGGTATATATTAGTTTATGCTTAATCATACTTTAATCCGAACACTCTCTAAATGCTAAACGCTCTTAAGAGGATGTTTGATAGATATATATAATCGATCAAAAGTAAAAGGTAAAAGGGCTAGGTATCTAATCCGATCGTACTCACGATCTAGTTTAATCTCTTTTAACTCTTACTTGAACTTCGTATAAATTTATATTATCATTCACTTGAGGAAAATTTTCTTTTCTGAGTCGTACAAGTGAAGAAGGGATTCAAACATATGATCGCTTGGTTGACACACTTGTACTAACCCTTGTGAGATCTCATATTGGTTGGAGAGGGTTGGAGAGGGGAACGAAACGTTTCTTATAAATGTGTGGAAACCTCTCTATAATAGATGTGTTTTAAAACTGTGAGGCTGACGGCGATATGTAACGGGCTAAATCAGACAATATCTACTAGCGGTGGACTTGGGCGGTTACAAATGGCATTAGAGCCAGGCACCGAGTGGTGTGCCAGTGAGGATGTTGGACTCCCAAAGGGGTGGATTGTGAGATCTTGCATTGGTTGGAGAGGGGAATGAAACATTTCTTATAAGGATGTGGAAACCTCTCTCGTAGTAGATGCGTTTTAAAACTGTGAGGCTGACGGTGATACGTAACAGGCCAAAACAGACAATATCTACTAGCGGTGGACTTGGGCTGTTACAAATGGCATTAGAGCCAGGCACCGAGCGGTGTGTCAGTGAGGACGCTGGACTCCCAAGGGGAGTGGATTGTGAGATCTTGCATTGGTTGGAGAGGCAACGAAACATTTTTATAAAGGTGTGGAAACCTCTCCCTAGTAGATGCATTTTAAAACTGTGAGGCTGACGGCGATACGTAACGGGCCAAACGAACAATATCTACTAGTGGTGGGCTCGGGCGGTTACAAACCCATTCGAATGAAGATATTGACATCATTTGAATTTATTTCTTATACTTTCTTGATTCCTAATAGAGAGTTTGTTAGTTTTTGCATATCTTTTCATTGTTTTGGGTCTTAAAAATGGTTATTTGAACTCAGGAAGAAATTTGAAGGAATTAAGGTATCAAAGGCCACCAATTCTGAGACTAATACGAAGAGGGCAAACTTATCTGTCACAAGAAAGGAGAAGATCAAACTGCCCAGTTACATTGGCCGTGAAGGCAGGACATATCATATCAGAGAATTCCTGAATCACCCTTCAGGAATTGAAGCAATGATTAACAAAAATGCCTTGAAAAGTTTCCAGTCACTTGATGCTAACACATACAGGTCTGTCTCAGTGGCGGTAGCTTCATCCTATTAGTATTTATGGAATATGATTGTAACGGTCCAAACCCATCATTAACAGATATTGTCTTTTTTGGACTTTTCTTTTCGGACTTTCCCTCAAAGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCACACCTTTACAAGGAATCTTCATTCTCCTCTCCAACCGACGTGGGATCTCACAATCTACCCCTCTTGGTTGGAGAGGAGAACGAAACACTCCTTATAAGGGTGTGCAAACCTCTTTCTAGTAGACGCATTTTAAAACCTTGAGGGGAGGCTCAGAAGGGAAAGCCCAAAGATGACAATATCTGCTAGCGGTGGGCTTGGATTGTTACAAACGGTATTAGAGCCAGGCTTTGAGTGGTGTGCAAGCGAGGACAAGGGGTATGGACTGTGAAATCTTTCATCGGTTGGAGAGGAGAACGAAGTATTCCTTATAAGGGTGTAGAAATCTCTCCCTAGTAGACGCGTTTTAAACCCTTGAGAGAAAGCCCAAAAAAGACAATATCTGCTAGCGGTGGGCTTAGGCTGTTACAAATGGTATTAGAGCCAGGTTTCGAGTGGTGTGCGAGCGAGGGCGCTGGCTTCCAAGGGGGGTAGATTGTGAGATCCTACATCGGTTGGGGAGGAGAACAAAGCATTTCTTAGAAGGGTGTAGAAATCTCTTCCTAGTAGACGTGTTTTAAAACATTGAGGGAAAATCCAAAGAAACAATATCTGCTAGTAGTGGACTTGGGCCGTTACAATGATCTTTGTCTTTCGGCTCTAATAGCCCAAAGGATTTATAGCCTGCATTCTTTTCCCTAGGCATTGGAAGTAGTATGATTATTATGTCCTCTTGGAGGTAAATGATTAGTGTTTTTCTTTTGCAGATGCACTTTGCATAAATTGCAACTCTTGAACTTTGAAGCTGCCCCTACACTGGATTTACGAGTGATCCCAACAGAAGAAGATTTTACAGTTGAGATGCTTTCTTGCAAGGTGGGTATTCTGGTCTCTGAATGTTCAGAATTGGTGGAACTTGCAAAATTGGTGAAACTTGAAATTTTATATGCAGTTTGAAGGTTCAGAATTGGTGGAACGCCAAAACGAACACTTTTCGGGTAAACTGATCTTCCCCTGATATGTTACTACGAAGATTATTAATTAACTATGAGAATTATTGATTTGTGAATTTTTGTGTAATTCGACTAGTTAAAACATATGCTCTCGATCAAGAACTTTGAGGTTCGAATTTAAGTACTTGAGAAACTGTAGTTGATCATTGTTTTAAAATGAAAATGTGCAGCTTTGATGATTAATCACTTGACATGGGACTCGGTTGGTTCAAATTCTTATCTGGAAGTTGATGTGAAGCTGAATCTATCTCTGGAGGTTCTAATATTTATCATCAATATCATACTCAACTGGTTAGCATCTACAGGCTGAATAATTCATGCTTTTTATGCAGCAGATTTATACACTTCCCTTCACCCTGATGCCTACAGCTGCGGTTGAGAATCCAGGAAATTTGTAAGTCATTTGAACACTGGCTGAAAACAATCTAATCTTTCATTTTTGTTTTTCTGAATTTGACTAAAAATTCAAATGTCTCGATCTTATGAGCTATAACTAGAAACGGTTTCCAAGTTCGGTTTTGGTCGAGTACCACCCGAAATTAACTGGATAGACACTCGATACGACCTTGGAAAACAAAACTGAATTTCTTTTCGCTGTGGCTAATTCATGTTCTTTCTTGTTTGTGCACCAATTGTTACAATTGTGCTGACACAGGATGTTACAAGCTCTGTTGGACAACCTTGTACCTCTGCTGCTGCGGCAATTAGTGCAAGATTATGAAAAATGGATCAGTCAGCAGCAGATAGATCATTCCCATGTCTCCATCTCTTGA

mRNA sequence

GATATGGACTCCCTCAATTTGCTTTTCTTAGTGCCATTTCCATAATTCTCATTCGGACAGTTCTTTGCAATCCGCCGCACACTTCAGAATTCCGGTCGCCGCTCTCCGCCGGCCAAGTGAGATTCCAAGCATAATTGATATTCTGAGCACGAAATTCCGCTCCAAGGTGAAGAAAAATGGTTTCTGTCTTGTATCTGGTACCTGATTCTTACTTTTGTTCTTTTGGCTTCCATATTTGTTCACTGTATTTCATTTCGCGAAAATGTGTTCGTAGAGAGGATGGTGGTTTTGGCTACCAAATGGCTCGGGCAAGGAAAATGCTCGTTTCCATTGCTTGCTACTCACAAGTTTAGTTCCCCGAGGAAGAAATTTGAAGGAATTAAGGTATCAAAGGCCACCAATTCTGAGACTAATACGAAGAGGGCAAACTTATCTGTCACAAGAAAGGAGAAGATCAAACTGCCCAGTTACATTGGCCGTGAAGGCAGGACATATCATATCAGAGAATTCCTGAATCACCCTTCAGGAATTGAAGCAATGATTAACAAAAATGCCTTGAAAACTGCCCCTACACTGGATTTACGAGTGATCCCAACAGAAGAAGATTTTACAGTTGAGATGCTTTCTTGCAAGTTTGAAGGTTCAGAATTGGTGGAACGCCAAAACGAACACTTTTCGGCTTTGATGATTAATCACTTGACATGGGACTCGGTTGGTTCAAATTCTTATCTGGAAGTTGATGTGAAGCTGAATCTATCTCTGGAGATTTATACACTTCCCTTCACCCTGATGCCTACAGCTGCGGTTGAGAATCCAGGAAATTTGATGTTACAAGCTCTGTTGGACAACCTTGTACCTCTGCTGCTGCGGCAATTAGTGCAAGATTATGAAAAATGGATCAGTCAGCAGCAGATAGATCATTCCCATGTCTCCATCTCTTGA

Coding sequence (CDS)

ATGGTGGTTTTGGCTACCAAATGGCTCGGGCAAGGAAAATGCTCGTTTCCATTGCTTGCTACTCACAAGTTTAGTTCCCCGAGGAAGAAATTTGAAGGAATTAAGGTATCAAAGGCCACCAATTCTGAGACTAATACGAAGAGGGCAAACTTATCTGTCACAAGAAAGGAGAAGATCAAACTGCCCAGTTACATTGGCCGTGAAGGCAGGACATATCATATCAGAGAATTCCTGAATCACCCTTCAGGAATTGAAGCAATGATTAACAAAAATGCCTTGAAAACTGCCCCTACACTGGATTTACGAGTGATCCCAACAGAAGAAGATTTTACAGTTGAGATGCTTTCTTGCAAGTTTGAAGGTTCAGAATTGGTGGAACGCCAAAACGAACACTTTTCGGCTTTGATGATTAATCACTTGACATGGGACTCGGTTGGTTCAAATTCTTATCTGGAAGTTGATGTGAAGCTGAATCTATCTCTGGAGATTTATACACTTCCCTTCACCCTGATGCCTACAGCTGCGGTTGAGAATCCAGGAAATTTGATGTTACAAGCTCTGTTGGACAACCTTGTACCTCTGCTGCTGCGGCAATTAGTGCAAGATTATGAAAAATGGATCAGTCAGCAGCAGATAGATCATTCCCATGTCTCCATCTCTTGA

Protein sequence

MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIKLPSYIGREGRTYHIREFLNHPSGIEAMINKNALKTAPTLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHVSIS

Homology

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BLAST of Carg08326 vs. NCBI nr
Match: KAG7029763.1 (hypothetical protein SDJN02_08105 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKTAPTLDLRVIPTEEDFTVEMLSCKFE 120
           LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKTAPTLDLRVIPTEEDFTVEMLSCKFE
Sbjct: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKTAPTLDLRVIPTEEDFTVEMLSCKFE 120

Query: 121 GSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTLMPTAAVENPG 180
           GSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTLMPTAAVENPG
Sbjct: 121 GSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTLMPTAAVENPG 180

Query: 181 NLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHVSIS 221
           NLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHVSIS
Sbjct: 181 NLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHVSIS 220

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BLAST of Carg08326 vs. NCBI nr
Match: XP_022929609.1 (uncharacterized protein LOC111436145 [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 215/243 (88.48%), Postives = 216/243 (88.89%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVL TKWLGQGK SFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLGTKWLGQGKGSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY GR GRTYHIREFLNHPSGIEAMINKNALK+                       AP
Sbjct: 61  LPSYSGRGGRTYHIREFLNHPSGIEAMINKNALKSFQSLDANTYRCTLHKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL
Sbjct: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 240

[Close]

BLAST of Carg08326 vs. NCBI nr
Match: XP_022997460.1 (uncharacterized protein LOC111492370 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-110
Identity = 214/243 (88.07%), Postives = 216/243 (88.89%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVLATKWLGQGK SFPLLATHKFSSPRKKFEGIK+SKATNSETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLATKWLGQGKGSFPLLATHKFSSPRKKFEGIKLSKATNSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY GR GRTYHIREFLNHPSGIEAMINKNALK+                       AP
Sbjct: 61  LPSYSGRGGRTYHIREFLNHPSGIEAMINKNALKSFQSLDANTYRCTLHKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL
Sbjct: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
            LSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV
Sbjct: 181 TLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 240

[Close]

BLAST of Carg08326 vs. NCBI nr
Match: XP_023545729.1 (uncharacterized protein LOC111805082 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-110
Identity = 213/243 (87.65%), Postives = 216/243 (88.89%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVL TKWLGQGK SFPLLATHKFSSPRKKFEGIKVSKAT+SETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLGTKWLGQGKGSFPLLATHKFSSPRKKFEGIKVSKATDSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY GREGRTYHIREFLNHPSGIEAMINKNALK+                       AP
Sbjct: 61  LPSYSGREGRTYHIREFLNHPSGIEAMINKNALKSFQSLDANTYRCTLHKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPT+EDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL
Sbjct: 121 TLDLRVIPTDEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSH 
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHA 240

[Close]

BLAST of Carg08326 vs. NCBI nr
Match: XP_038885685.1 (uncharacterized protein LOC120075989 isoform X1 [Benincasa hispida] >XP_038885686.1 uncharacterized protein LOC120075989 isoform X1 [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 198/243 (81.48%), Postives = 209/243 (86.01%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVL TKWLGQGK SFPLLA HKFSSPRKKFE IK+SKATNSETNTKRANLSVTR+EKI+
Sbjct: 1   MVVLTTKWLGQGKGSFPLLAAHKFSSPRKKFEVIKLSKATNSETNTKRANLSVTRREKIR 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY  R GR YHIREFLNHPSGIEAM+NKNAL++                       AP
Sbjct: 61  LPSYSSRSGRIYHIREFLNHPSGIEAMLNKNALRSFQLLDANTYRCTLPKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPT++DFTVEMLSCKFEGSELVERQNEHFSALMINHLTWD+V SNSYLEVDVKL
Sbjct: 121 TLDLRVIPTDKDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDTVDSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWIS QQ+DHS +
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWIS-QQLDHSQL 240

[Close]

BLAST of Carg08326 vs. ExPASy TrEMBL
Match: A0A6J1EP97 (uncharacterized protein LOC111436145 OS=Cucurbita moschata OX=3662 GN=LOC111436145 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.0e-111
Identity = 215/243 (88.48%), Postives = 216/243 (88.89%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVL TKWLGQGK SFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLGTKWLGQGKGSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY GR GRTYHIREFLNHPSGIEAMINKNALK+                       AP
Sbjct: 61  LPSYSGRGGRTYHIREFLNHPSGIEAMINKNALKSFQSLDANTYRCTLHKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL
Sbjct: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 240

[Close]

BLAST of Carg08326 vs. ExPASy TrEMBL
Match: A0A6J1K9Q3 (uncharacterized protein LOC111492370 OS=Cucurbita maxima OX=3661 GN=LOC111492370 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 214/243 (88.07%), Postives = 216/243 (88.89%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVLATKWLGQGK SFPLLATHKFSSPRKKFEGIK+SKATNSETNTKRANLSVTRKEKIK
Sbjct: 1   MVVLATKWLGQGKGSFPLLATHKFSSPRKKFEGIKLSKATNSETNTKRANLSVTRKEKIK 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY GR GRTYHIREFLNHPSGIEAMINKNALK+                       AP
Sbjct: 61  LPSYSGRGGRTYHIREFLNHPSGIEAMINKNALKSFQSLDANTYRCTLHKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL
Sbjct: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
            LSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV
Sbjct: 181 TLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 240

[Close]

BLAST of Carg08326 vs. ExPASy TrEMBL
Match: A0A5A7VGG9 (DUF1997 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003060 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.1e-98
Identity = 192/243 (79.01%), Postives = 207/243 (85.19%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MV+L TKWLGQG  SFPLL  HKFSSPRKKFE IK SKATNSETNTK+ANLSV R+EKI+
Sbjct: 1   MVILTTKWLGQGTGSFPLLTAHKFSSPRKKFEAIKPSKATNSETNTKKANLSVKRREKIR 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY G EGRTYHIREFLNHPSGIEAM+NKNALK+                       AP
Sbjct: 61  LPSYSG-EGRTYHIREFLNHPSGIEAMLNKNALKSFQLLDANTYRCTLPKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLR+IPT+EDFTVEMLSCKFEGSELVERQN+HFSA+MINHLTWD++ SNSYLEVDVKL
Sbjct: 121 TLDLRLIPTDEDFTVEMLSCKFEGSELVERQNDHFSAMMINHLTWDTIDSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWI+ QQ+DHS +
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWIN-QQLDHSQL 240

[Close]

BLAST of Carg08326 vs. ExPASy TrEMBL
Match: A0A1S3BBW5 (uncharacterized protein LOC103488246 OS=Cucumis melo OX=3656 GN=LOC103488246 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 191/243 (78.60%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MV+L TKWLGQG  SFPLL  HKFSSPRKKFE IK SKATNSETNTK+ANLSV R+EKI+
Sbjct: 1   MVILTTKWLGQGTGSFPLLTAHKFSSPRKKFEAIKPSKATNSETNTKKANLSVKRREKIR 60

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LP Y G EGRTYHIREFLNHPSGIEAM+NKNALK+                       AP
Sbjct: 61  LPIYSG-EGRTYHIREFLNHPSGIEAMLNKNALKSFQLLDANTYRCTLPKLQLLNFEAAP 120

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLR+IPT+EDFTVEMLSCKFEGSELVERQN+HFSA+MINHLTWD++ SNSYLEVDVKL
Sbjct: 121 TLDLRLIPTDEDFTVEMLSCKFEGSELVERQNDHFSAMMINHLTWDTIDSNSYLEVDVKL 180

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWI+ QQ+DHS +
Sbjct: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWIN-QQLDHSQL 240

[Close]

BLAST of Carg08326 vs. ExPASy TrEMBL
Match: A0A0A0LSA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379170 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 191/243 (78.60%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 1   MVVLATKWLGQGKCSFPLLATHKFSSPRKKFEGIKVSKATNSETNTKRANLSVTRKEKIK 60
           MVVL TK LGQG  SFPLL  HKFSSPRKKFE  K+SKATNSETNTK+ANLSV ++EKI+
Sbjct: 62  MVVLTTKLLGQGTGSFPLLTAHKFSSPRKKFETTKLSKATNSETNTKKANLSVKKREKIR 121

Query: 61  LPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-----------------------AP 120
           LPSY G +GRTYHI+EFLNHPSGIEAM+NKNALK+                       AP
Sbjct: 122 LPSYSG-QGRTYHIKEFLNHPSGIEAMLNKNALKSFQLLDANTYRCTLPKLQLLNFEAAP 181

Query: 121 TLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKL 180
           TLDLRVIPT+EDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWD++ SNSYLEVDVKL
Sbjct: 182 TLDLRVIPTDEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDTIDSNSYLEVDVKL 241

Query: 181 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQIDHSHV 221
           NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQL+QDYEKWIS QQ+DHS +
Sbjct: 242 NLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLMQDYEKWIS-QQLDHSQL 301

[Close]

BLAST of Carg08326 vs. TAIR 10
Match: AT4G31115.1 (Protein of unknown function (DUF1997) )

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-43
Identity = 99/221 (44.80%), Postives = 141/221 (63.80%), Query Frame = 0


Query: 18  LLATHKFSSPRKKFE--GIKVSKATNSETNTKRANLSVTRKEKIKLPSYIGREGRTYHIR 77
           LL ++  + PR++     +   K     ++ K+AN+S +RK++IKL    G +  T+   
Sbjct: 25  LLRSYPNTIPRERIHMGNVHSGKRAMVISSLKKANISASRKQRIKL-EINGEKELTF--S 84

Query: 78  EFLNHPSGIEAMINKNALKT-------------------------APTLDLRVIPTEEDF 137
           EFL HPSG+EA+IN  AL++                          P L LRV PT+ED 
Sbjct: 85  EFLKHPSGMEAVINAKALQSYHLVDDSDDTYRCTLPKVQLMSFEVYPVLVLRVTPTQEDC 144

Query: 138 TVEMLSCKFEGSELVERQNEHFSALMINHLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTL 197
           TVE+LSCK EGSEL+E Q+E FSA+M N +TW+      +LEVDV+LN++LEI T PFT+
Sbjct: 145 TVELLSCKLEGSELLENQSERFSAIMTNCMTWNMEHPEPFLEVDVRLNVTLEISTRPFTM 204

Query: 198 MPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWISQQQ 212
           +P +AVE PGNL++Q L+D LVPLLL+QL++DY++WI +QQ
Sbjct: 205 LPVSAVEAPGNLVMQTLVDTLVPLLLQQLLKDYDEWIKKQQ 242

[Close]

BLAST of Carg08326 vs. TAIR 10
Match: AT4G31115.2 (Protein of unknown function (DUF1997) )

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-43
Identity = 94/193 (48.70%), Postives = 130/193 (67.36%), Query Frame = 0


Query: 44  TNTKRANLSVTRKEKIKLPSYIGREGRTYHIREFLNHPSGIEAMINKNALKT-------- 103
           ++ K+AN+S +RK++IKL    G +  T+   EFL HPSG+EA+IN  AL++        
Sbjct: 77  SSLKKANISASRKQRIKL-EINGEKELTF--SEFLKHPSGMEAVINAKALQSYHLVDDSD 136

Query: 104 -----------------APTLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMIN 163
                             P L LRV PT+ED TVE+LSCK EGSEL+E Q+E FSA+M N
Sbjct: 137 DTYRCTLPKVQLMSFEVYPVLVLRVTPTQEDCTVELLSCKLEGSELLENQSERFSAIMTN 196

Query: 164 HLTWDSVGSNSYLEVDVKLNLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQ 212
            +TW+      +LEVDV+LN++LEI T PFT++P +AVE PGNL++Q L+D LVPLLL+Q
Sbjct: 197 CMTWNMEHPEPFLEVDVRLNVTLEISTRPFTMLPVSAVEAPGNLVMQTLVDTLVPLLLQQ 256

[Close]

BLAST of Carg08326 vs. TAIR 10
Match: AT5G04440.1 (Protein of unknown function (DUF1997) )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 94  KTAPTLDLRVIPTEEDFTVEMLSCKFEGSELVERQNEHFSALMINHLTWDSV---GSNSY 153
           +  P L +RV        +++LSCK EGS +V  QN+ F A M+N ++ DS     S   
Sbjct: 126 EVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTQEGSSEQQ 185

Query: 154 LEVDVKLNLSLEIYTLPFTLMPTAAVENPGNLMLQALLDNLVPLLLRQLVQDYEKWIS 209
           +  D  + +++EI    F + P  A+E  G  +L  +L  ++P  L QL +DY  W S
Sbjct: 186 ITSDAVIEVNIEI-PFAFRVFPVGAIEATGTQVLDQILKLMLPRFLSQLSKDYHAWAS 242

The following BLAST results are available for this feature:

BLAST of Carg08326 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029763.1	2.5e-118	100.00	hypothetical protein SDJN02_08105 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022929609.1	1.4e-110	88.48	uncharacterized protein LOC111436145 [Cucurbita moschata]	[more]
XP_022997460.1	5.5e-110	88.07	uncharacterized protein LOC111492370 [Cucurbita maxima]	[more]
XP_023545729.1	5.5e-110	87.65	uncharacterized protein LOC111805082 [Cucurbita pepo subsp. pepo]	[more]
XP_038885685.1	1.0e-100	81.48	uncharacterized protein LOC120075989 isoform X1 [Benincasa hispida] >XP_03888568...	[more]

BLAST of Carg08326 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP97	7.0e-111	88.48	uncharacterized protein LOC111436145 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A6J1K9Q3	2.7e-110	88.07	uncharacterized protein LOC111492370 OS=Cucurbita maxima OX=3661 GN=LOC111492370...	[more]
A0A5A7VGG9	3.1e-98	79.01	DUF1997 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]
A0A1S3BBW5	1.5e-97	78.60	uncharacterized protein LOC103488246 OS=Cucumis melo OX=3656 GN=LOC103488246 PE=...	[more]
A0A0A0LSA8	2.9e-96	78.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379170 PE=4 SV=1	[more]

BLAST of Carg08326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31115.1	8.1e-43	44.80	Protein of unknown function (DUF1997)	[more]
AT4G31115.2	8.1e-43	48.70	Protein of unknown function (DUF1997)	[more]
AT5G04440.1	1.6e-11	33.05	Protein of unknown function (DUF1997)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018971	Protein of unknown function DUF1997	PFAM	PF09366	DUF1997	coord: 93..206 e-value: 1.9E-25 score: 89.8
None	No IPR available	PANTHER	PTHR34131:SF2	FAMILY PROTEIN, PUTATIVE (DUF1997)-RELATED	coord: 6..94
None	No IPR available	PANTHER	PTHR34131:SF2	FAMILY PROTEIN, PUTATIVE (DUF1997)-RELATED	coord: 94..210
None	No IPR available	PANTHER	PTHR34131	FAMILY NOT NAMED	coord: 6..94
None	No IPR available	PANTHER	PTHR34131	FAMILY NOT NAMED	coord: 94..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08326-RA	Carg08326-RA	mRNA