Carg08293 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08293
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	two-on-two hemoglobin-3
Location	Carg_Chr05: 3232993 .. 3235776 (-)
RNA-Seq Expression	Carg08293
Synteny	Carg08293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTCAATTTGTTTCAGAAGTTAGGCCTCCAGACGCTCGTCAATCTATCGACCAAATTCTATAACAGGTCTGTCTGTGTTCATGAATGCAGCATCGCGAAGTGATTTGAGTTTTGAGTTGTTTTCTTATTTTCCCGCGAGGAAGTAAATTGCTGTGGACTCCGAATTGATTTAGTATTTTTCTTTTTTGTTTCGAGTAGACATGGAAATGAATTTTAATTGATGGCTAATTGATAAGCAAGATGATGGATGTGTCCAGGATCAGTTGATGCAATATCGTTAATGCTTTAGCTCTATCTCGTCGAGATCAAACTGATTGTATTGTTGATTGCTGTGTTTTATTGTTCCATCAATGTGAATACCAGGGTGTACGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCCGCCTCTATATTCTCAAAGAAAAGGCAAGTTTTTCATTTTTCTCGCTCGTAGTCTTCCAGTATGAATTGAAAACATAAACTGAAAAGACTTGCAGATCGAATTTGTTCTTTTGTTCCTTTCCCAAATATATTGCACAATGACAGATTCTGTTGGTTCTCTGCCTGTTTGATAATCATTTGGTTTTTGAGCAATGAAAATCAAGCTTGTAAACACTACTTCCAACAAGTTTCTATCAACTTGCTATCAATGTTTTAAAAAACCAACAAAGTTCTGAAAACTGAAAAAAAGTAGTCTTAGAAAACCTGGGCTTGTTTTTAGATTTTGACTTAGAATTCAAATGTTTCAACTTTTTCTGGTATATTCTGTATTGTCCTTTCACCTACGGGTTAGGCTGATTAGTTTGATCTCCGAGACAGTAAACTCTATGAAATAAGAGACAAAAACAGAACCTGAATCTTGACCTGCTACCCTGATATAGGCTAAAAAACTCAGCTGGTTAAGCAAGACTTAAGTTTAACCATTTGGTTCATTAGAACAAATATTGTACCATGTTTAGTTGTAGTTGAGCACCAACAGTGCTCTTCATGGCTTATAGAACGACCTACACAAAAAAGTGTTCTTATTTCGAGTTAGAAATCACTGGTTGATGTGTAGAAAACAGCTGTTTTTCCCCTAATAACATATGGGAATCTTTTTTTGTTTCTTCCTTGCTGAGCCTAACCTCTCATTTGAGTTGAGGCAATCAATCAATTATGTCTTCAACGTGCTCAAAACTCGTTACCTAACAATTTATCATGGAGGTCTCGATATGTCATCTCTTCCATTGTTGCTGATTATGATTCATAAGAAATTTGGTTCTGTCATGCACCCCATGTCCTACCTTGAGCACTCTGCAGTTTGGTTTGTTTAGGAGCTAAAAAGAACGTATTATATGCTCAAGAATGCTTTTGTCATGTTTGAAGCACTTTTGCTAACCAAACAACACTTAATTGCTTTGTGAGAAAATATTTGTGTAGCGTCTAATGCTATGTTAAAATGGGCTTGTTATTAAGCGTTTTTTTAATCATTATGCATACAATGAATGGCAAATACTCACAAACTCACCCTAATTTAGCATACCCCGCAGCTAGGTGGCTTAACGTTTAGTTTGAATATCGAATTCGAATAAAGTCTTTTGACCTTGGAACTTTTTTTTTTTACTTGATCCAATGCAATTTCATGGGTACATGAAAATGTAATCTGTTTGCAACATGCTTGTTATGATCCTTACGAACTTTGATGGCATTTCAGGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGGCATGTATTCTTCTCTTGTTCCTTATACCATCATTTATTGGCATCCTCGAATCTATAATCCTTTGTTTATGCGTCTCTATCTATATATGTATGTAAATTATAAGAAACGAAACTTTTGTTGAGAAAAAGTGATTTTCAAGTGCATACAAATAGACAGTTCCAATAAAGTAGCCACAAACAGTAATGGGTTCAACTCTAATAAAAATAAGACCTAAAGGGCAATTACTACATCAAACCCGAAAAGGGAGACAGACCAAATTACTTTCCAGAAATTCTATTAACAATCCAAACCCACCGTTAGCAGGTAGTGTCATCTTTGAGCTGTTCTTTTTGGGTTTTCCCTCAAGGTTTTTAAAACGCATCTGCTAGGGTGAGGTTTTCACACCCTTATAAAGAATACTTCGTTCCCCTCTTCAATTGACGTGGGATCTCACAATCCGCCCCTCTTGGGGCCCAACATCCCAGCGTCCTCGCTAGCACTCGTTCTTCTCTCCAATCGATGTGGGATCTCACATTCTCGATCTCTCTAAAGATTATGTTGTTTCTCTCAAACCCAAACGCTCTATAGCATAAAAGCCCACGTGCCATAGAACGTGACCTTTATCTCGAAAAGGCAAATGAGGAAGAAACTCTTCCGAATTGAACTATGCTCTTTGTTTTCATCTCTCGAGTTCCATTATTAGCTATACTTACTTCCTGGTTGTCTGCAGACACACAGCTTTCTTTCTCGTGGCTGGAGATGAGATGAAGAATCAAAACCAGCAAACTCAATGCAAGCATGGTATCCAGCAACCTGCTGCCCCATAG

mRNA sequence

ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTCAATTTGTTTCAGAAGTTAGGCCTCCAGACGCTCGTCAATCTATCGACCAAATTCTATAACAGGGTGTACGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCCGCCTCTATATTCTCAAAGAAAAGGCAAGTTTTTCATTTTTCTCGCTCGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGACACACAGCTTTCTTTCTCGTGGCTGGAGATGAGATGAAGAATCAAAACCAGCAAACTCAATGCAAGCATGGTATCCAGCAACCTGCTGCCCCATAG

Coding sequence (CDS)

ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTCAATTTGTTTCAGAAGTTAGGCCTCCAGACGCTCGTCAATCTATCGACCAAATTCTATAACAGGGTGTACGACGACGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCCGCCTCTATATTCTCAAAGAAAAGGCAAGTTTTTCATTTTTCTCGCTCGTCATCCAGCTCTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCAGAGAGACACACAGCTTTCTTTCTCGTGGCTGGAGATGAGATGAAGAATCAAAACCAGCAAACTCAATGCAAGCATGGTATCCAGCAACCTGCTGCCCCATAG

Protein sequence

MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAERHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP

Homology

[Close]

BLAST of Carg08293 vs. NCBI nr
Match: KAG7029730.1 (Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.5 bits (789), Expect = 3.1e-80
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAERHT 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAERHT
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAERHT 120

Query: 121 AFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
           AFFLVAGDEMKNQNQQTQCKHGIQQPAAP
Sbjct: 121 AFFLVAGDEMKNQNQQTQCKHGIQQPAAP 149

[Close]

BLAST of Carg08293 vs. NCBI nr
Match: KAG6598792.1 (Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 141/177 (79.66%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 169

[Close]

BLAST of Carg08293 vs. NCBI nr
Match: XP_022962612.1 (two-on-two hemoglobin-3 [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 4.6e-68
Identity = 139/177 (78.53%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYD+EEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDEEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 169

[Close]

BLAST of Carg08293 vs. NCBI nr
Match: XP_022996482.1 (two-on-two hemoglobin-3 [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67
Identity = 138/177 (77.97%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYD+EEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDEEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQN QTQCKHGIQQPAAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQPAAP 169

[Close]

BLAST of Carg08293 vs. NCBI nr
Match: XP_023545796.1 (two-on-two hemoglobin-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 6.7e-67
Identity = 138/176 (78.41%), Postives = 138/176 (78.41%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYDDEEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDDEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAA 149
                                    RHTAFFLVAGDEMKNQNQQT CKHGIQQPAA
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNQQTLCKHGIQQPAA 168

[Close]

BLAST of Carg08293 vs. ExPASy Swiss-Prot
Match: Q67XG0 (Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-53
Identity = 114/181 (62.98%), Postives = 123/181 (67.96%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKAS  SGV + +AFAIDE NLF KLGLQT +NLST FY RVYDDEEEWF+SIF 
Sbjct: 1   MQSLQDKASVLSGVDQAEAFAIDESNLFDKLGLQTFINLSTNFYTRVYDDEEEWFQSIFS 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NS KEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTH+AAE   
Sbjct: 61  NSNKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHQAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQ------QTQCKHGIQQP 148
                                    RHTAFFLVAG+E+KNQN+      Q  CKH   +P
Sbjct: 121 EHMQNALDDSVDIDQDSKIKMMKFFRHTAFFLVAGNELKNQNEKPKHKPQCACKHAANKP 173

[Close]

BLAST of Carg08293 vs. ExPASy Swiss-Prot
Match: O31607 (Group 2 truncated hemoglobin YjbI OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbI PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 31/90 (34.44%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 28  FQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMGGPPLYSQ 87
           ++ +G + L  L   FY RV        + IF +   E A + Q +F  Q +GGPPLY++
Sbjct: 9   YEAIGEELLSQLVDTFYERV--ASHPLLKPIFPSDLTETA-RKQKQFLTQYLGGPPLYTE 68

Query: 88  RKGKFFIFLARHPALIGRHRPFPVTHRAAE 118
             G        HP L  RH PFP+T+  A+
Sbjct: 69  EHG--------HPMLRARHLPFPITNERAD 87

[Close]

BLAST of Carg08293 vs. ExPASy TrEMBL
Match: A0A6J1HD51 (two-on-two hemoglobin-3 OS=Cucurbita moschata OX=3662 GN=LOC111463009 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.2e-68
Identity = 139/177 (78.53%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYD+EEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDEEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 169

[Close]

BLAST of Carg08293 vs. ExPASy TrEMBL
Match: A0A6J1K220 (two-on-two hemoglobin-3 OS=Cucurbita maxima OX=3661 GN=LOC111491717 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 138/177 (77.97%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYD+EEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDEEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQN QTQCKHGIQQPAAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQPAAP 169

[Close]

BLAST of Carg08293 vs. ExPASy TrEMBL
Match: A0A0A0LPU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375770 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.4e-67
Identity = 137/177 (77.40%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNRVYDD+EEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRVYDDDEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQN QTQCKHGIQQ AAP
Sbjct: 121 HHMQLALDETPDIDADSKDRMIKFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Carg08293 vs. ExPASy TrEMBL
Match: A0A1S3BCI0 (two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 136/177 (76.84%), Postives = 137/177 (77.40%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT V LSTKFYNRVYDD+EEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVTLSTKFYNRVYDDDEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQN QTQCKHGIQQ AAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Carg08293 vs. ExPASy TrEMBL
Match: A0A5A7VA21 (Two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003480 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.1e-66
Identity = 136/177 (76.84%), Postives = 137/177 (77.40%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT V LSTKFYNRVYD+EEEWFRSIFG
Sbjct: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVTLSTKFYNRVYDEEEEWFRSIFG 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTHRAAE   
Sbjct: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHRAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQQTQCKHGIQQPAAP 150
                                    RHTAFFLVAGDEMKNQN QTQCKHGIQQ AAP
Sbjct: 121 HHMQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Carg08293 vs. TAIR 10
Match: AT4G32690.1 (hemoglobin 3 )

HSP 1 Score: 210.7 bits (535), Expect = 8.1e-55
Identity = 114/181 (62.98%), Postives = 123/181 (67.96%), Query Frame = 0


Query: 1   MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTLVNLSTKFYNRVYDDEEEWFRSIFG 60
           MQSLQDKAS  SGV + +AFAIDE NLF KLGLQT +NLST FY RVYDDEEEWF+SIF 
Sbjct: 1   MQSLQDKASVLSGVDQAEAFAIDESNLFDKLGLQTFINLSTNFYTRVYDDEEEWFQSIFS 60

Query: 61  NSKKEDAIQNQYEFFVQRMGGPPLYSQRKGKFFIFLARHPALIGRHRPFPVTHRAAE--- 120
           NS KEDAIQNQYEFFVQRMGGPPLYSQRKG        HPALIGRHRPFPVTH+AAE   
Sbjct: 61  NSNKEDAIQNQYEFFVQRMGGPPLYSQRKG--------HPALIGRHRPFPVTHQAAERWL 120

Query: 121 -------------------------RHTAFFLVAGDEMKNQNQ------QTQCKHGIQQP 148
                                    RHTAFFLVAG+E+KNQN+      Q  CKH   +P
Sbjct: 121 EHMQNALDDSVDIDQDSKIKMMKFFRHTAFFLVAGNELKNQNEKPKHKPQCACKHAANKP 173

The following BLAST results are available for this feature:

BLAST of Carg08293 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029730.1	3.1e-80	100.00	Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6598792.1	5.4e-69	79.66	Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962612.1	4.6e-68	78.53	two-on-two hemoglobin-3 [Cucurbita moschata]	[more]
XP_022996482.1	3.0e-67	77.97	two-on-two hemoglobin-3 [Cucurbita maxima]	[more]
XP_023545796.1	6.7e-67	78.41	two-on-two hemoglobin-3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XG0	1.1e-53	62.98	Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1	[more]
O31607	1.2e-05	34.44	Group 2 truncated hemoglobin YjbI OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]

BLAST of Carg08293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD51	2.2e-68	78.53	two-on-two hemoglobin-3 OS=Cucurbita moschata OX=3662 GN=LOC111463009 PE=4 SV=1	[more]
A0A6J1K220	1.4e-67	77.97	two-on-two hemoglobin-3 OS=Cucurbita maxima OX=3661 GN=LOC111491717 PE=4 SV=1	[more]
A0A0A0LPU3	9.4e-67	77.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375770 PE=4 SV=1	[more]
A0A1S3BCI0	4.6e-66	76.84	two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 ...	[more]
A0A5A7VA21	6.1e-66	76.84	Two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Carg08293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32690.1	8.1e-55	62.98	hemoglobin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012292	Globin/Protoglobin	GENE3D	1.10.490.10	Globins	coord: 1..145 e-value: 8.3E-38 score: 131.4
IPR001486	Truncated hemoglobin	PFAM	PF01152	Bac_globin	coord: 26..138 e-value: 6.1E-28 score: 97.4
IPR044203	Two-on-two hemoglobin-3	PANTHER	PTHR47366	TWO-ON-TWO HEMOGLOBIN-3	coord: 1..119
IPR009050	Globin-like superfamily	SUPERFAMILY	46458	Globin-like	coord: 26..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08293-RA	Carg08293-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015671	oxygen transport
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019825	oxygen binding
molecular_function	GO:0005344	oxygen carrier activity