Carg08282 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08282
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Translation initiation factor IF-2
Location	Carg_Chr05: 3144564 .. 3148722 (-)
RNA-Seq Expression	Carg08282
Synteny	Carg08282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTTTCGCCTAAATTTATTTTTGTTTTTCCTATTCTGAAGCAAGTTCTTCAGCTTGGGAAGGAAGGAGTGTTAAGAACAAGGAAGACGGGAGGAAGAAGGTTGTTTCTTCTGACATAGAGCCTAATCAATAGGCAAAAATCCTAAAACCTAAAACCAATTATGGTTTCAGAGCCCAAATCCACTGTTTCGAAGCAAAAACCTGGTAATCAAGATGGCGGCTCCATCAAGAACTCAAATCCTTCTTCCAAACACAAATCCGTCTCTGTTGTCACTAAATCCGAGGTACTAATTTTGGAAATCTGTCGCGAATTGTTTTTTCTTTTTTTTGTCTGAATTGTTTTGATGTTTAGAAACGCATCTAAGATCGGTAAGAGTAACGGATTTGGGGTAATTGAAATTTGGAGTTTGTGAGGGTTCTTTCAGTTACTTCCGATGTTGTAATTTCGTATTTCATTGGGGGATTCACCTCATTGGGCGGGCAGCTGTTCTTGGTGGCTTTGGAATTTTTTTGAATCCTTCCTTTTCTCTGATCGTTGATTTTGAACTTGGGTTTCATTTGATTTGTTTATGGAAGGTGAAGTCAAAGACAAGTTCGAGTTCTTCAAGGGCGACAACAAAAACTACTACAACAGTTACTACTGCTAAAGTGAGAGAAAAGAAAGTGTATAATTTGCCTGGTCAGAAATGTGATCCACCTGAAGAGGTTTGTACTTTAATCCTTGATGGTTTTTGTTGTTGATATGATTGATGAACTCATCATTCTTGCTCTTTTGTATGCTATGAACAGAGAGAGCCCCTTCGGATATTTTACGAGTCCTTGTCGAAACAGATACCAGCAAGTGAAATGGCAGAGTTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCTTTGAGGTCTTTATAAAACGATGAATATAGTATTGATTTGAACCAATCCATATGCTCCCATTTTTAATAAGATTTCGACTAGAAGCATACAAGTTCTGTAATGTGCCTCTCTGTAGATATATGGTAATCATGTATATAAGGGTATAATCGGTGATTTGAGAGCAAAAGCAATAAGAACTCCGACATAGAATACTATTTCTAGTGCTATAGGATACGATTGATTAGCTGATGTTTCGAAATTTGAAGTTGGTTCATTAGAACCATATAAACCGATACCAAGAGCATGAGCATGAGCTTTAGGCGTATGGTAATCCGTGATCGTCTCAATTTGTGAAGTTGGATGATGATTATCATCCACATAATCTACTACTACTATAGGTTTTCTATTCGAATTATAGGGACTAAGTGCAGTCGAAATTGTACACGAGAGGCTGCCTTTTAGGGGCAGATAAGCTCTGTCAAACAGCTTTACCACTAAGTGTTTCCTTTGTGTTTTGGTTATTCCAGTTTTCATGTGACACTTGCTCAGTATTTTGGTTACTCAGACAAGATGAACCATTGGGTTAAGACTGAAACTTTTCATGTCTGATCCAATATTGATGATAGAAACGATAGATTGGATAAGTTGCTAGCTCTTGATATGAAAACAAATCCAACTTTATGCAAATGTCTTCCGCTGGAAGCTTATGCTTATATTCATGATGGAGTATATCAGAATTGAGTATAATAGCCTGCATTTGATCCTTCTATGTTCTTTCTACTTTCTGAATTTGTTCATTTTGTAACTTGAGTTTATGGATAAGGTATAAAGTGTGCAATGTGAGTTATTTACATGTGACTGACGTGTAGAGAGTCTGACATCCCACATCGGTTGGAGAGGGGAACGAAACATTCCTAATAAGGGTGTGGAAGGCTGTTATAGTTGGTTTCAGAGCCAAACACCAGGCGATGTGCCAGTGAGGAGGCCGAGCCCCAAAGGGGGTTCGAGACAAGGCGGTGTACCAGAAAGGACATTGGGCCCCGAAGGGGGGTGGATTATGAGATCCATCATCGATCGGGGAGGAGAACGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACTGCATTTTAAAAACTTGAGGGGAAGCCCAGCCTAGGACGTTTGAGGAAATTTCTCAACAAAGGTCTTGGATTCAAACCACCCAATAAGGAACTTAATTAATGAAAACCTTTGAACTCTCAATGTGCTATCATTTGGGCGGGAGAAGTCTCTCCATGGAGTCGTCGGGTAGGAATGAATTCCACATATATCTCGAAATAAACAATTAAACAAAAGTCTTCTTTTTTTTTTTTTTATCATCTGTTCCTGGTTTTAATGGATATATTGCGGGGCAGCTGTAACGAGCTCAAGGAACTATGTTTAGCTGGAAGAGTATATTTTTCCGCCCCCAACAAGATTGCAGTTCAAAGACAATTATCTTGTTTTAGGATTGTTAAGTTACATGAGAAATGGCTGGATCATGGACTGAGTCATTTGTTTGCCAGAATGAGAATTCTTTCCCTGAGTGAAGGTCTGGTGTGATTTGTTGGCTTTTAGGAACAATGCACCAAAAATTGGTGTCTCCTGATGGATTACTGGTTGATATTAAGGAGCGTTAACATTAAAATAAAGGTTGTATGAAGTTGATCTTCTAGAAGAGTTGAGAACAAGTTTTTTCTTTTTGTTTGAAATTCGTGTGCTACTTTGGCAGTTCTTCATGCGAAAGTACTTCTAACTTACAATGGGTTAAAAAAGTTGTGAGATCCCACATCGGTTCAGGAGGAGAACGAACCATTCTTTAAAGGGTGTGGAAATCTCTCCTTAGGTGACGCGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGGAAAACCCAAAGAGGACAGTATTTGCTAGCGGTGGCCTTGGGCCGTTACAAATGGTATCAAAGCCAGACATCGGGCGATGTGTCAGCGAGGAGACTGATCCCTGAAGGGGGGTGGACACGAGTTTGTGTGCCAACAAGAACGTTGAGCTCCGAAGGGGGTGGATTGGGTGGGGGGTCCCTCATCGATTGGAGAAAGGAACGAGTGCTAACGAGGACACTGAGTCCCGAAGGGGGATGGATTGTGAGATCCCACATCGATTGGGGAGGAGAATGAAGCATTCTTTAAAGGATGTGGAAACCTATCCCTAGTAGACGTGTTTTAAAAACCTTGAGAGGAAGCTCGAAAAGGAAACCCCAAAGAAGACAATATCTGCTAGCAGGTGGATTTGGACTTAGACTTCGGAGTGTTACAAAAATTATAAAAGCTGAATTTGCACTTGAAGAAGATTCCAAAATTATAATGTACAAGACAGGACATAAGACCTGTAGCAATTAGCTCTTGAATAGTTAAGATCAAAGCAAGGTGCTGTGGGTTTACGAATTATAAACACAAAGGTTTCGTGTTTTTTGGTACAAACAGGATTCAATCAGTGGTCTTATGTACTTAAACACCGATTTAGGATGCTCAAATTTAGAGCTAAAAAGAAAGCTACATGTCTTGTGAAAAATATCTGAATATTTCATGTCTTGTGATTTTTGAAGCATGCCATTATATTTATTGACATATTCGTTATTAACATGAGATTGGTAGCCCTTTGTTATCTCGTATCAAATATTTGAATCGTGTATCCTTTTCGTCGTTTCGTTCTGTTAAAACGAGATTGCTAGCACCCTTATTGTCTTGGGTTGAGAATGCATCTCTTTTCAACATTTTTATGGTTTCTGTGCATTACTCTATTGAGAAGCCAAAAGGGATAACCAGTCTAAATTTCTAGGATGATGGAGCACGGCATGTTATCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACCGCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGCGACGACGACGACGACAACTTCATTCTAAGTCCCAAGAGAAGGAAAATGTAGGGAGAACACACCCGCCCTGCCTTCGTTCTTTATTATCATACTTTTCGAGGAATTACTTGATTAAAATTTCCTTAGAGTTGATGATTATAACCCAACAGTATTTACCTGGACATTCTTTTATACTCCACAGCTGTGTATGAACAATAATTTTAGAAGAGACGAGTCTTATGGTTCAAGTCCTTTTC

mRNA sequence

TCGTTTTCGCCTAAATTTATTTTTGTTTTTCCTATTCTGAAGCAAGTTCTTCAGCTTGGGAAGGAAGGAGTGTTAAGAACAAGGAAGACGGGAGGAAGAAGGTTGTTTCTTCTGACATAGAGCCTAATCAATAGGCAAAAATCCTAAAACCTAAAACCAATTATGGTTTCAGAGCCCAAATCCACTGTTTCGAAGCAAAAACCTGGTAATCAAGATGGCGGCTCCATCAAGAACTCAAATCCTTCTTCCAAACACAAATCCGTCTCTGTTGTCACTAAATCCGAGGTGAAGTCAAAGACAAGTTCGAGTTCTTCAAGGGCGACAACAAAAACTACTACAACAGTTACTACTGCTAAAGTGAGAGAAAAGAAAGTGTATAATTTGCCTGGTCAGAAATGTGATCCACCTGAAGAGAGAGAGCCCCTTCGGATATTTTACGAGTCCTTGTCGAAACAGATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCACGGCATGTTATCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACCGCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGCGACGACGACGACGACAACTTCATTCTAAGTCCCAAGAGAAGGAAAATGTAGGGAGAACACACCCGCCCTGCCTTCGTTCTTTATTATCATACTTTTCGAGGAATTACTTGATTAAAATTTCCTTAGAGTTGATGATTATAACCCAACAGTATTTACCTGGACATTCTTTTATACTCCACAGCTGTGTATGAACAATAATTTTAGAAGAGACGAGTCTTATGGTTCAAGTCCTTTTC

Coding sequence (CDS)

ATGGTTTCAGAGCCCAAATCCACTGTTTCGAAGCAAAAACCTGGTAATCAAGATGGCGGCTCCATCAAGAACTCAAATCCTTCTTCCAAACACAAATCCGTCTCTGTTGTCACTAAATCCGAGGTGAAGTCAAAGACAAGTTCGAGTTCTTCAAGGGCGACAACAAAAACTACTACAACAGTTACTACTGCTAAAGTGAGAGAAAAGAAAGTGTATAATTTGCCTGGTCAGAAATGTGATCCACCTGAAGAGAGAGAGCCCCTTCGGATATTTTACGAGTCCTTGTCGAAACAGATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCACGGCATGTTATCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACCGCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGCGACGACGACGACGACAACTTCATTCTAAGTCCCAAGAGAAGGAAAATGTAG

Protein sequence

MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

Homology

[Close]

BLAST of Carg08282 vs. NCBI nr
Match: KAG7029719.1 (hypothetical protein SDJN02_08061 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60
           MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT
Sbjct: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60

Query: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120
           VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA
Sbjct: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120

Query: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180
           KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN
Sbjct: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180

Query: 181 FILSPKRRKM 191
           FILSPKRRKM
Sbjct: 181 FILSPKRRKM 190

[Close]

BLAST of Carg08282 vs. NCBI nr
Match: XP_022962317.1 (protein spalten-like [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 6.4e-91
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60
           MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT
Sbjct: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60

Query: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120
           VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGML PEKA
Sbjct: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLPPEKA 120

Query: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180
           KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN
Sbjct: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180

Query: 181 FILSPKRRKM 191
           FILSPKRRKM
Sbjct: 181 FILSPKRRKM 190

[Close]

BLAST of Carg08282 vs. NCBI nr
Match: KAG6598780.1 (hypothetical protein SDJN03_08558, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342.4 bits (877), Expect = 2.5e-90
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60
           MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT
Sbjct: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60

Query: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120
           VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA
Sbjct: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120

Query: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180
           KKAYEKKLRRQKEQRSGTPIKSPKP SKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN
Sbjct: 121 KKAYEKKLRRQKEQRSGTPIKSPKPLSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180

Query: 181 FILSPKRRKM 191
           FILSPKRRKM
Sbjct: 181 FILSPKRRKM 190

[Close]

BLAST of Carg08282 vs. NCBI nr
Match: XP_023546622.1 (protein spalten-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.4 bits (864), Expect = 7.9e-89
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60
           MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT
Sbjct: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60

Query: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120
           VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA
Sbjct: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120

Query: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180
           KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDS  DDDN
Sbjct: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDS--DDDN 180

Query: 181 FILSPKRRKM 191
           FILSPKRRKM
Sbjct: 181 FILSPKRRKM 188

[Close]

BLAST of Carg08282 vs. NCBI nr
Match: XP_022996595.1 (uncharacterized protein LOC111491788 [Cucurbita maxima])

HSP 1 Score: 325.1 bits (832), Expect = 4.0e-85
Identity = 187/198 (94.44%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA 60
           MVSEPK TVSKQKPGNQDGG       SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA
Sbjct: 1   MVSEPKPTVSKQKPGNQDGGSRLKIDSSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA 60

Query: 61  TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG 120
           TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG
Sbjct: 61  TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG 120

Query: 121 MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TN 180
           MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TN
Sbjct: 121 MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKLLSKPESSQRPQQPSKNGDLKAKQKVTTN 180

Query: 181 DSDDDDDNFILSPKRRKM 191
           DSDDDDDNFILSPKRRKM
Sbjct: 181 DSDDDDDNFILSPKRRKM 198

[Close]

BLAST of Carg08282 vs. ExPASy TrEMBL
Match: A0A6J1HCD9 (protein spalten-like OS=Cucurbita moschata OX=3662 GN=LOC111462804 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60
           MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT
Sbjct: 1   MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTT 60

Query: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKA 120
           VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGML PEKA
Sbjct: 61  VTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLPPEKA 120

Query: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180
           KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN
Sbjct: 121 KKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDN 180

Query: 181 FILSPKRRKM 191
           FILSPKRRKM
Sbjct: 181 FILSPKRRKM 190

[Close]

BLAST of Carg08282 vs. ExPASy TrEMBL
Match: A0A6J1K794 (uncharacterized protein LOC111491788 OS=Cucurbita maxima OX=3661 GN=LOC111491788 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.0e-85
Identity = 187/198 (94.44%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA 60
           MVSEPK TVSKQKPGNQDGG       SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA
Sbjct: 1   MVSEPKPTVSKQKPGNQDGGSRLKIDSSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRA 60

Query: 61  TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG 120
           TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG
Sbjct: 61  TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG 120

Query: 121 MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TN 180
           MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TN
Sbjct: 121 MLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKLLSKPESSQRPQQPSKNGDLKAKQKVTTN 180

Query: 181 DSDDDDDNFILSPKRRKM 191
           DSDDDDDNFILSPKRRKM
Sbjct: 181 DSDDDDDNFILSPKRRKM 198

[Close]

BLAST of Carg08282 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKS 60
           MVS+PKST+SK KP   DGG                SIKNS PSSKHKSVS+VTKSEVKS
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKS 60

Query: 61  KTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASE 120
           KT SSSS+ TTKTTTT T TAKVREKK++NLPGQK DPPEEREPLRIFYESLSKQIPASE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S KP S+PESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKQKVTNDSDDDDDNFILSPKRRKM 191
           GD+KAK+K+ NDSDDDDD FILSPKRRKM
Sbjct: 181 GDIKAKKKIMNDSDDDDD-FILSPKRRKM 205

[Close]

BLAST of Carg08282 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKS 60
           MVS+PKST+SK KP   DGG                SIKNS PSSKHKSVS+VTK+EVKS
Sbjct: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKS 60

Query: 61  KTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASE 120
           KT SSSS+ TTKTTTT T TAKVREKKV+NLPGQK DPPEEREPLRIFYESLSKQIPASE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S KP S+PESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKQKVTNDSDDDDDNFILSPKRRKM 191
           GD+KAK+K+ NDSDDDDD FILSPKRRKM
Sbjct: 181 GDIKAKKKIVNDSDDDDD-FILSPKRRKM 205

[Close]

BLAST of Carg08282 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67
Identity = 157/201 (78.11%), Postives = 172/201 (85.57%), Query Frame = 0


Query: 1   MVSEPKSTVSKQKPGNQDGGS-----------IKNSNPSSKHKSVSVVTKSEVKSKTSSS 60
           MVS+PK TVSK K G+QDGGS             +S  SSKHKSVSV+ KSEVKSKT +S
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWM 120
           SS+ TTK TT  +TAKVREKKV+NL GQK DPPEEREPLRIFYESLSKQI  SEMAEFWM
Sbjct: 61  SSKTTTKATT--STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWM 120

Query: 121 MEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQK 180
           MEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIKS KPPS+PESSQRPQQPSKNGDLKAK+K
Sbjct: 121 MEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKK 180

Query: 181 VTNDSDDDDDNFILSPKRRKM 191
           +TN+SDDDD++FILSPKRRKM
Sbjct: 181 ITNNSDDDDNDFILSPKRRKM 199

[Close]

BLAST of Carg08282 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 8.3e-36
Identity = 106/199 (53.27%), Postives = 133/199 (66.83%), Query Frame = 0


Query: 3   SEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVT--KSEVKSKTSSSS-------SRA 62
           S+P+S+VS     ++     K   P +  K+++  +   S VK K  ++S       ++ 
Sbjct: 48  SKPRSSVSTVTAKSE----AKPKVPINSVKTIATTSAAASLVKGKAQTTSTVVSLVKAKT 107

Query: 63  TTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHG 122
           T+ T + V     REKKVY+L GQK DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHG
Sbjct: 108 TSATVSLVKGKAKREKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHG 167

Query: 123 MLSPEKAKKAYEKKLRRQKEQRSGTPIKS-PKPPSKPESSQRPQQPSKNG-DLKAKQKVT 182
           MLSPEKAK+A+EKK R+ K+ R GTP KS P   SK ESSQR      NG D + K+KV 
Sbjct: 168 MLSPEKAKRAFEKKQRKMKQIRMGTPSKSAPTFSSKAESSQRTSASKNNGLDARKKKKVV 227

Query: 183 NDSDDDDDNFILSPKRRKM 191
           +D DDDDD+FILS KRRK+
Sbjct: 228 DDDDDDDDDFILSHKRRKV 242

[Close]

BLAST of Carg08282 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 82/199 (41.21%), Postives = 111/199 (55.78%), Query Frame = 0


Query: 16  NQDGGSIKNSNPSSKHKSV---SVVTKSEVK---SKTSSS--SSRATTKTTTTVTTAKVR 75
           + D   IK+S   S+ K V     + K + K   SK +SS   S+   K        K R
Sbjct: 51  DDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKPVSKRNSSVGVSKENKKPEKEEEVKKKR 110

Query: 76  EKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKK 135
           E+KVY+LPGQK + P+ER+PLRIFYESL KQIP S+MA+ W+ME G+L  EKAKK  EKK
Sbjct: 111 ERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAEKAKKVLEKK 170

Query: 136 LRRQKEQRSGTPIKS----PKPPSKPESSQRPQ---QPS-------KNGDLK---AKQKV 190
           L  QK  +  +P+KS    P+  SK  + ++ +    PS       K  D K    K+K 
Sbjct: 171 L--QKGGKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALSNKKKGNDSKPTTKKRKK 230

The following BLAST results are available for this feature:

BLAST of Carg08282 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029719.1	1.7e-91	100.00	hypothetical protein SDJN02_08061 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022962317.1	6.4e-91	99.47	protein spalten-like [Cucurbita moschata]	[more]
KAG6598780.1	2.5e-90	99.47	hypothetical protein SDJN03_08558, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023546622.1	7.9e-89	98.95	protein spalten-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022996595.1	4.0e-85	94.44	uncharacterized protein LOC111491788 [Cucurbita maxima]	[more]

BLAST of Carg08282 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCD9	3.1e-91	99.47	protein spalten-like OS=Cucurbita moschata OX=3662 GN=LOC111462804 PE=4 SV=1	[more]
A0A6J1K794	2.0e-85	94.44	uncharacterized protein LOC111491788 OS=Cucurbita maxima OX=3661 GN=LOC111491788...	[more]
A0A1S3BCG5	1.3e-68	78.95	uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LLY4	1.7e-68	78.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1	[more]
A0A6J1GJC9	3.1e-67	78.11	uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg08282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11600.1	8.3e-36	53.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19990.1	1.1e-16	41.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	PANTHER	PTHR33828	OS05G0596200 PROTEIN	coord: 15..189
None	No IPR available	PANTHER	PTHR33828:SF1	OS05G0596200 PROTEIN	coord: 15..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08282-RA	Carg08282-RA	mRNA