Carg08268 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08268
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	oxidative stress 3
Location	Carg_Chr05: 3051287 .. 3051984 (+)
RNA-Seq Expression	Carg08268
Synteny	Carg08268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCAAGAACTCATCCATTTCAATTCTTCTCTTTGTGGAAAGTCATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAGTGAGTTCATGTTCTTTGAACTAAAATGTAGAGCTCTGTTTCAAATTCTAAAGTTTTTGGCATCTTGAATTCATCTCTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAAAGGGAAGCTCGAACTATTTATCGTTAGTGTCAAGTTTTAGTGTCAAGTTTAACGGGCGGTTCTAAAATTTACTTG

mRNA sequence

AAGATCAAGAACTCATCCATTTCAATTCTTCTCTTTGTGGAAAGTCATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAAAGGGAAGCTCGAACTATTTATCGTTAGTGTCAAGTTTTAGTGTCAAGTTTAACGGGCGGTTCTAAAATTTACTTG

Coding sequence (CDS)

ATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAA

Protein sequence

MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLCDDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE

Homology

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: KAG7029705.1 (hypothetical protein SDJN02_08047 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL
Sbjct: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 163

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: KAG6598765.1 (hypothetical protein SDJN03_08543, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL
Sbjct: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGRASLATLVS+MDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSRMDISLRPE 163

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_022961691.1 (uncharacterized protein LOC111462384 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIG      SSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIG------SSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSF SSSSSSSSLLS+REVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCV+DL
Sbjct: 61  DDDALSSF-SSSSSSSSLLSQREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVDDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 156

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_023546661.1 (uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546662.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546663.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546664.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546665.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546666.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546667.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 9.2e-70
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRK+EKCFIPHLLHFS VSCSEDSTSSIG   SLSSSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKDEKCFIPHLLHFSDVSCSEDSTSSIG---SLSSSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSFSSSSSSSSSLLS+REVCEEQQLL IKKGLSKFYEGKSRTFSSLSDVKCVEDL
Sbjct: 61  DDDALSSFSSSSSSSSSLLSQREVCEEQQLLSIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKG+NDYRKKYSRITPKATI KKHGRASLATL SKMDISLRPE
Sbjct: 121 AKGDNDYRKKYSRITPKATILKKHGRASLATLASKMDISLRPE 160

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_022996858.1 (uncharacterized protein LOC111491976 [Cucurbita maxima])

HSP 1 Score: 268.1 bits (684), Expect = 5.0e-68
Identity = 152/163 (93.25%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLL FSVVSCSEDSTSSIG     SSSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLQFSVVSCSEDSTSSIG-----SSSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSF SSSSSSSSLLS+REVCEEQQLL IKKGLSKFYEGKSRTFSSLSDVKCVE+L
Sbjct: 61  DDDALSSF-SSSSSSSSLLSQREVCEEQQLLSIKKGLSKFYEGKSRTFSSLSDVKCVEEL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGR SLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRVSLATLVSKMDISLRPE 157

[Close]

BLAST of Carg08268 vs. ExPASy TrEMBL
Match: A0A6J1HB27 (uncharacterized protein LOC111462384 OS=Cucurbita moschata OX=3662 GN=LOC111462384 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIG      SSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIG------SSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSF SSSSSSSSLLS+REVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCV+DL
Sbjct: 61  DDDALSSF-SSSSSSSSLLSQREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVDDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 156

[Close]

BLAST of Carg08268 vs. ExPASy TrEMBL
Match: A0A6J1KC75 (uncharacterized protein LOC111491976 OS=Cucurbita maxima OX=3661 GN=LOC111491976 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 152/163 (93.25%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLC 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLL FSVVSCSEDSTSSIG     SSSSSSSLC
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLQFSVVSCSEDSTSSIG-----SSSSSSSLC 60

Query: 61  DDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           DDDALSSF SSSSSSSSLLS+REVCEEQQLL IKKGLSKFYEGKSRTFSSLSDVKCVE+L
Sbjct: 61  DDDALSSF-SSSSSSSSLLSQREVCEEQQLLSIKKGLSKFYEGKSRTFSSLSDVKCVEEL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGR SLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRVSLATLVSKMDISLRPE 157

[Close]

BLAST of Carg08268 vs. ExPASy TrEMBL
Match: A0A1S3BBN3 (uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37
Identity = 112/169 (66.27%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSL----FNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSS 60
           ME RKLTVDADFATS+    +NRKEEK  I H      V+ SE STSSIGS+      SS
Sbjct: 1   MESRKLTVDADFATSVLCDDWNRKEEKSIISHFQF--TVAYSEGSTSSIGSI------SS 60

Query: 61  SSLCDDDALSSFSSSSSSS--------SSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTF 120
           SS+CDDD LSSFSSSSSSS        SSLLS+ E+ E+Q  + IKKGLSKFYEGKSRTF
Sbjct: 61  SSICDDDGLSSFSSSSSSSSSSSLSSTSSLLSQSELREQQ--VPIKKGLSKFYEGKSRTF 120

Query: 121 SSLSDVKCVEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMD 158
           SSLSDVK +EDLAK E D+RKK +RI+PKATISKKHGR+  ATLVSK D
Sbjct: 121 SSLSDVKSIEDLAKRETDHRKKDTRISPKATISKKHGRSYFATLVSKTD 159

[Close]

BLAST of Carg08268 vs. ExPASy TrEMBL
Match: A0A5A7VFF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003850 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.9e-37
Identity = 111/169 (65.68%), Postives = 127/169 (75.15%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSL----FNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSS 60
           ME RKLTVDADFATS+    +NRKEEK  I HL     V+ SE STSSIGS+      SS
Sbjct: 1   MESRKLTVDADFATSVLCDDWNRKEEKSIISHLQF--TVAYSEGSTSSIGSI------SS 60

Query: 61  SSLCDDDALSSFSSSSSSS--------SSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTF 120
           SS+CDDD LSSFSSSSSSS        SSLLS+ E+ E+Q  + IKKGLSKFYEGKSRTF
Sbjct: 61  SSICDDDGLSSFSSSSSSSSSSSLSSTSSLLSQSELREQQ--VPIKKGLSKFYEGKSRTF 120

Query: 121 SSLSDVKCVEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMD 158
           SSLSDVK ++DLAK + D+RKK +RI+PKATISKKHGR+  ATLVSK D
Sbjct: 121 SSLSDVKSIKDLAKRKTDHRKKDTRISPKATISKKHGRSYFATLVSKTD 159

[Close]

BLAST of Carg08268 vs. ExPASy TrEMBL
Match: A0A2R6QUY1 (E3 UFM1-protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13050 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 66/138 (47.83%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 21  EEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLCDDDALSSFSSSSS-SSSSLL 80
           EEKC    +    V S  EDST+S    S++SSSSSS L +D   SS SSSSS SSSS  
Sbjct: 9   EEKCESESI----VSSFEEDSTNS----SAVSSSSSSDLMEDATSSSSSSSSSLSSSSYG 68

Query: 81  SRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSR------ 140
              E+ E    L IK+GLSK+Y+GKS+TFSSL+ VK +EDLAK    +++K         
Sbjct: 69  PLYELSELMAQLPIKRGLSKYYQGKSQTFSSLASVKSLEDLAKKGRRHKRKVKASKSYGG 128

Query: 141 ------ITPKATISKKHG 146
                 ++PKATISKK+G
Sbjct: 129 GLDSQILSPKATISKKNG 138

[Close]

BLAST of Carg08268 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 46  GSLSSLSSSSSSSLCDDDALSSFSSSSSSSSSLLS-----RREVCEEQQLLCIKK-GLSK 105
           GS + +SSSSS S+C  D     SSSSSSSSS  +       ++  +  ++ +KK GLSK
Sbjct: 23  GSSAKVSSSSSISMCSSDLTEDASSSSSSSSSSSNGPFDDLSDLISQLPIIQVKKGGLSK 82

Query: 106 FYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSR---ITPKATISKKHGRAS 149
           +Y+GKS++F+SL++V  ++DL K  +  +    R     PKATIS K  R S
Sbjct: 83  YYKGKSQSFTSLANVTSLQDLVKRGSRTKSCCKRDYFYGPKATISMKATRTS 134

[Close]

BLAST of Carg08268 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 36  SCSEDSTSSIGSLSSLSSSSSSSLCDDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKK 95
           S  ED++SS     SLSSS  S   +DD     SSSSS+        ++ +    L IK+
Sbjct: 38  SDEEDNSSS----CSLSSSMCSDFTEDDDDDDVSSSSSNG----PLEDLSDLMSHLPIKR 97

Query: 96  GLSKFYEGKSRTFSSLSDVKCVEDLAK---GENDY--RKKYSRIT-------------PK 153
           GLSKFYEGKS++F+SL +VK +EDL K      +Y  ++K SR T             PK
Sbjct: 98  GLSKFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVFSPK 157

[Close]

BLAST of Carg08268 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 94  KKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKK 131
           ++GLSK Y+GKS++F++L++   VEDLAK EN +  K
Sbjct: 56  RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAK 92

The following BLAST results are available for this feature:

BLAST of Carg08268 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029705.1	1.0e-76	100.00	hypothetical protein SDJN02_08047 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6598765.1	2.3e-76	99.39	hypothetical protein SDJN03_08543, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961691.1	3.2e-70	94.48	uncharacterized protein LOC111462384 [Cucurbita moschata]	[more]
XP_023546661.1	9.2e-70	93.87	uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022996858.1	5.0e-68	93.25	uncharacterized protein LOC111491976 [Cucurbita maxima]	[more]

BLAST of Carg08268 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB27	1.5e-70	94.48	uncharacterized protein LOC111462384 OS=Cucurbita moschata OX=3662 GN=LOC1114623...	[more]
A0A6J1KC75	2.4e-68	93.25	uncharacterized protein LOC111491976 OS=Cucurbita maxima OX=3661 GN=LOC111491976...	[more]
A0A1S3BBN3	1.0e-37	66.27	uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=...	[more]
A0A5A7VFF0	2.9e-37	65.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2R6QUY1	1.2e-09	47.83	E3 UFM1-protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_A...	[more]

BLAST of Carg08268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26288.1	1.5e-06	41.07	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G56550.1	2.6e-06	40.74	oxidative stress 3	[more]
AT3G03170.1	2.5e-04	51.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..81
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 33..154
None	No IPR available	PANTHER	PTHR33172:SF29	OXIDATIVE STRESS 3	coord: 33..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08268-RA	Carg08268-RA	mRNA