Carg08261 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATACGCCGGTGGAAGACAGAGATTTGGGTTGCCGGAGAAGCTATCGGCTAACCCTTGTTTGATCAAAGACATCGGAATCGGACCGGAAAGTTGATTGTTCGAGAAATTCAAGGAACTTGGGAACAATTTACCCAAACTTTCTGGGATTTTCCCGGATAAACGATTGTTTGAGAGATCAAGAACATTGAGGGATTTTAACGATGTCAATGAACTAGGGATTGAAGAATTCAATTGGTTTCCTTGTAACATCACCAGATTTAGCTTCTTCAGGCTACCAATCTGCGGCGGCACTGCGCCGGAGAGGAGATTGTTACTGAGATCTAGCTTCACCAGATTGGTGGCTGCTGAAATCTCCGGCGGGATAACTCCAGAAATCCTGTTTTTTTGTAAGAACAATTCCGACAAGTTTCTACCCTGTGAGATTGAATTTGAAATGGAACCAGTGAGGTTATTATGAGCAACATCAATGATTGAAACATGTGGGAGACCAAAAACACCTTCAGGAATTGCTCCGACCAGCTGATTGAAACTAATTCTAAACCTTAAAAGTGACCGGCATTCAGCAAAACTCGCCGGAATTTCTCCGGAAAGGCTGTTTTGAAGAACAAGAAAGTAGAGCAATTCCCCTCCTCTGCATATATCCAATGGCAATGATCCCGACAGGCGATTCTCCGACAAGTCGACGACGACCATAGGTGAGAACTTCCCCAACTTTTGTGGAATCTGTCCTGTAAGAAAATTGTCATAAAGTGATAGCATAGTTAGTGTTGTTGAGTTAGCTAATACACTTGGAATCTCTCCTGTTAGGCTATTGTTGTAAATCTGTAGAACTTTAAGCTTAGGGAGTTTGCATATAGATTCCGGAATCTCCCCGGTCAAAAGGTTCACCGACATGTCGACGTCGACGAGCTCGGTTAGATTTCCGAGCTCTTCCAGTATGTTTCCTGTGAGTTGATTGTAATAGAGTTCAAGTTGTTGCAGGTTCTTGAGCAAGGAGATTTCTTTTGGAATCTCTCCCTTGAGAAAATTCCCACTTAGTTCGAGATCAATAAGCGACGTCATGTTCCCGATCGATCGAGGGATTTCTCCGTCCAACATACATGTTGTCAACACCATAGATTTCAGCTTCTTCAATCCAGAGATCTTCTCAGGTAATTTCCATAAGTTGAGATTATAATTCTCGTTGAAATTCAGTATCTCGAGATTAACAAGGTCGAAAACCGACATGGGGAAATCGCCGGTGAACGAATTGTAGGAGAGGTCGAGTACACGGAGTTGTTTCATTTGCGATAAATCCGGGATTGTTCCATTGAGATATAGAGAACTCATGTCAAGCTCTTGAATGAGAGAGCAGTTGGTGATTCCTGAGGGAAAACGCCCCGACAATCCGGTATCAGCGAGGCGAAGAACTCTTAGTGATGGCAGGTAAGAGCATACATCGTCCGGGAAGGTACCGGAGAGAGGGTGGCCGGAGATATCGATCCGAACGACATGACCGCCGTCATTGCAGCGGATTCCAGTGAAGTTGCATAAGGATTTTCCTTGTGAAAGATCCCAATTAGAGAGGAGCTCACCGGTGGCAGTTGTTTGCATGAGAAGGAAGAACTGGGACTGGTTGGCTATGGCGGCAGTAAGAGCTTGAGAAGAAGCAATGGCGGAAGTGAAGAACAGAAGAAGAAAGAAGGCTGA ATGAAATACGCCGGTGGAAGACAGAGATTTGGGTTGCCGGAGAAGCTATCGGCTAACCCTTGTTTGATCAAAGACATCGGAATCGGACCGGAAAGGATTGAAGAATTCAATTGGTTTCCTTGTAACATCACCAGATTTAGCTTCTTCAGGCTACCAATCTGCGGCGGCACTGCGCCGGAGAGGAGATTGTTACTGAGATCTAGCTTCACCAGATTGGTGGCTGCTGAAATCTCCGGCGGGATAACTCCAGAAATCCTGTTTTTTTGTAAGAACAATTCCGACAAGTTTCTACCCTGTGAGATTGAATTTGAAATGGAACCAGTGAGGTTCTTGAGCAAGGAGATTTCTTTTGGAATCTCTCCCTTGAGAAAATTCCCACTTAGTTCGAGATCAATAAGCGACGTCATGTTCCCGATCGATCGAGGGATTTCTCCGTCCAACATACATGTTGTCAACACCATAGATTTCAGCTTCTTCAATCCAGAGATCTTCTCAGAGCAGTTGGTGATTCCTGAGGGAAAACGCCCCGACAATCCGGTATCAGCGAGGCGAAGAACTCTTAGTGATGGCAGAGCATACATCGTCCGGGAAGGTACCGGAGAGAGGGTGGCCGGAGATATCGATCCGAACGACATGACCGCCGTCATTGCAGCGGATTCCAGTGAAATCCCAATTAGAGAGGAGCTCACCGGTGGCAGTTGTTTGCATGAGAAGGAAGAACTGGGACTGGTTGGCTATGGCGGCAGTAAGAGCTTGAGAAGAAGCAATGGCGGAAGTGAAGAACAGAAGAAGAAAGAAGGCTGA ATGAAATACGCCGGTGGAAGACAGAGATTTGGGTTGCCGGAGAAGCTATCGGCTAACCCTTGTTTGATCAAAGACATCGGAATCGGACCGGAAAGGATTGAAGAATTCAATTGGTTTCCTTGTAACATCACCAGATTTAGCTTCTTCAGGCTACCAATCTGCGGCGGCACTGCGCCGGAGAGGAGATTGTTACTGAGATCTAGCTTCACCAGATTGGTGGCTGCTGAAATCTCCGGCGGGATAACTCCAGAAATCCTGTTTTTTTGTAAGAACAATTCCGACAAGTTTCTACCCTGTGAGATTGAATTTGAAATGGAACCAGTGAGGTTCTTGAGCAAGGAGATTTCTTTTGGAATCTCTCCCTTGAGAAAATTCCCACTTAGTTCGAGATCAATAAGCGACGTCATGTTCCCGATCGATCGAGGGATTTCTCCGTCCAACATACATGTTGTCAACACCATAGATTTCAGCTTCTTCAATCCAGAGATCTTCTCAGAGCAGTTGGTGATTCCTGAGGGAAAACGCCCCGACAATCCGGTATCAGCGAGGCGAAGAACTCTTAGTGATGGCAGAGCATACATCGTCCGGGAAGGTACCGGAGAGAGGGTGGCCGGAGATATCGATCCGAACGACATGACCGCCGTCATTGCAGCGGATTCCAGTGAAATCCCAATTAGAGAGGAGCTCACCGGTGGCAGTTGTTTGCATGAGAAGGAAGAACTGGGACTGGTTGGCTATGGCGGCAGTAAGAGCTTGAGAAGAAGCAATGGCGGAAGTGAAGAACAGAAGAAGAAAGAAGGCTGA MKYAGGRQRFGLPEKLSANPCLIKDIGIGPERIEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSISDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDNPVSARRRTLSDGRAYIVREGTGERVAGDIDPNDMTAVIAADSSEIPIREELTGGSCLHEKEELGLVGYGGSKSLRRSNGGSEEQKKKEG Homology
BLAST of Carg08261 vs. NCBI nr
Match: PON56471.1 (hypothetical protein TorRG33x02_296220 [Trema orientale]) HSP 1 Score: 112.8 bits (281), Expect = 4.4e-21 Identity = 71/184 (38.59%), Postives = 83/184 (45.11%), Query Frame = 0
BLAST of Carg08261 vs. NCBI nr
Match: GER40230.1 (cytochrome c550 [Striga asiatica]) HSP 1 Score: 89.7 bits (221), Expect = 4.0e-14 Identity = 57/146 (39.04%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of Carg08261 vs. ExPASy TrEMBL
Match: A0A2P5C645 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_296220 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21 Identity = 71/184 (38.59%), Postives = 83/184 (45.11%), Query Frame = 0
BLAST of Carg08261 vs. ExPASy TrEMBL
Match: A0A5A7Q4V2 (Cytochrome c550 OS=Striga asiatica OX=4170 GN=STAS_16892 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14 Identity = 57/146 (39.04%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of Carg08261 vs. ExPASy TrEMBL
Match: A0A7N0V1S0 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 40/79 (50.63%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Carg08261 vs. ExPASy TrEMBL
Match: A0A6N2LJ29 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS238795 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 9.7e-06 Identity = 44/151 (29.14%), Postives = 62/151 (41.06%), Query Frame = 0
BLAST of Carg08261 vs. ExPASy TrEMBL
Match: A0A7C9AG34 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04 Identity = 38/109 (34.86%), Postives = 48/109 (44.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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