Carg08242 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCCGCGGCTGCAACTGGAAGTCAGCGACCGTAAACGCTAAAGAGGTTGAGAATCACACCGGTAAATCGTCAGCGGAATTGTGAACCATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCACTGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGTTGAGTCCTATACTATTTTCTCACGCTCATTTCTGAGCTGTTGTTGGGAGTTATCTAAGTTTAATGTTTTAATTTGATGTAGGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGTACAAAGTTAGGCTCCACTATTTATAACCTTTCGCCTAAATTCATTTTCATTGTGCTCTTTTAACTCGGTTATTCTTGCTAATTGTGACTCCGCAAGTTAGCATAGATATTTTACTTCGGATTGCAAACTTCTTAGTAGAATTTAACTGGTCAATTAGTTATTAGCGGATTTGAATCGTTTAGCTCCCTTTAACCATTTGGTTTTTGATTTTTGAAACTCAAGCATATAACTACTTCCACCTGCAAATGTTTGTTGTCAAACGGGCTTAATTTTCAGAAAATATTATGATTTGTTAGTGTGGTGGTGTACGGTATACCGTCAATTTAGAGTCAAGGAGAACAATCTCAGTGAAATCTTCAGATCTGTTTCACCTTTTGTCGTTTCTTTTATTCTTTTATCCCGAAACTAATGAAATTACTCAATAATTTGTTTCAACAATTTGTATATATGGTGTATTCATGCTTGTCGAGTGCTTTTAGTTTCCTTAATGTATCTGGGGTATCAATTTCAAGTCAGGGAGGCATTTTCTCCAGTTGAACTAATGGTTGCAGCAAACTCATTATGGGATTTTCAGGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGTTGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGTATGGTTACATAATAGTCTTAGCTAATGTCGATCGCTATTTTTCTGCAAGCCACACTATGATCAAATAGTAGCTGTTGCTTCTTGGTATGAATAATGCTAGCATGTAGATTTTGTGATGTTAGAGACTGTACTGTATTGCTAACAATTAAAATCTGATGCGTCAAATAATTCATCAAAGCATCTGCTTGCCTATTCCAAGTATGCCAGTCTTGTCTCCATATTAAAAGTAAAGCTAGAGTGACTTTGTTGCATATTCCAAGTATTCCAGTCCTTATCAAATCAACGGAGACTAGCTTAAAGCTCAAAGCTCCCTTGATCGATGTTATTTGGAAATTCAATGTTCCAAACAAGATTAAAGTTCTTTTGTGAAGCCTTGCCTATAAAAATTTGAATACTCATGAAAGGCTACGGTGTAAGCTCACGACTATGCCTCGTTCCCCTTCGGTCTGTGCCTTATGCCTGAAAGATGAATAATCCATGGAACACATTTTCCTTAACTGCTATCCTGCTTCGAGAGGGTGGAATCAGATCCTTAAAGCTTTTGGTTTTTCTGTTTAACGGCCTGAGATGATTATGGATTGGCTTATTGAAGCTTTAAATGGTTGGATCTTTAAAGGCAGGAGTAAAATCTTATGGAGGTGTGCTACCCGGATGCTTGTTTGGGAGTTACGGAAGAAGAGAAATAGAAGGATTCTTTAAAGAAAAGTCTATTACTTTTGATTCTTTTTGCAGCAATATAGAAATTGCGTTCTCTCTATGGTGTCTTAGAACCATGAATTTTTTTTTGTATAATTGTAGCCCAACTCAACTACTCCACAATTGGGAGGCTGTGCTCCATTAGTCTTTTGTTTGTGAGGGGGTTCCTCGCCCCCTTCCCTTATTGTGTCCCCTTTTGTTTTTCAACATACACTCATATATATATAAGATATCAATGATCTGATAGGCAATAACCACCAAAAATAACAGATGCAGAGGAACACACAAGAACTCTCCCTCTCAGAGGAAACTCTAAGCCCAAAATTCCAACATGTTCCAATGCCATGCAAGGGCCTCCTACTGGACAAGATAAACGTGAGGCTTCCTATGGCCATGGTTAATACGTATTTTAGAAAGGGCAAAGAAGGAATTCACCACCGACAGTTAGTTAGAAGTCAAAGAAGTATGGTTAGTGAGCTCATACGCTTATATGTTTGGGGGGTTGCCGTAGAAGGTGGCTTTTATTTTGAAATAGGAGCAGTGTGAGGAGGGTGAGTAAAGCCCTTGTGACTGTTCTTCCTGCTCTTAATATCATGAATTATAAGGGAGATACCTTACAAGGTCACCTGTCCTATTACAAAATTGGGGACCGTAGTACCTACTCCATTAACAATTCCATCAACACTCGCCAACTACTGATCTTCTCCCTTCCCCACTTGCACTCCTAGTGTATGTGCAGCACACCAGCAGTCTCGCTTTGATATCATGACCATCTTGTTTTATGTTTTATTACTTACCATTGTTTTGTTATCATATTCCGGACCACTATTGTCGATATAGTTCCTTGCATTTTGTTGGAAAATAACTTCGATCAACTGCTGAAGTGAAGGGATTATTTACATGCCTTTGTGATCATACTGCTTCATGCAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGATCTTAATAGGTACACCCAACTCTTCATGCATTCGAGCCTAAAAGATTTCCGTACCACCGATTTTCTCTGTTTTTATGTCGTTGTAGATATCTCCTGGCACTTTTATGTTGATTGAGATTTGCTTATATACATAATTGAGTCACCATTGTTCTCATATCTTACCTTGAAAATGAAACGAAGCAAATGTTCACCACGATTCAATTTGTCCATTCTGTGAAGAAATTTTGTAAATTTCTTCAGCACTGAATACGTTATGTCTCCTTATTAACTATATAAGTCCAGATTTAATACTTCTTTAGTTCCCCCCAACCCCCTGCTCAAATTTGATTCTTGTTTGCAGCAATGCTAATATAAATATAACTAATCATTATATATTTCACTTAGATTGCAGGTTTCTCTTTCGTTATGTGTGCCCGTTACCGTCTTATCAATGCCGATGCTCGTGACACGTATTATTCATCAATTGGTTTGCTTTTCTGCTTCCCGTTCTGCTATTTTGTATTGTGCGAGCCATAGGCAAGTTTCCAAAACAGTAAACAGGAAGTTCCTCTGTTTCTGTATTTCATAGGCTTCGCGACATCACCTGTTGCCCCCATTGTTTACATACAAATCCTTGTCCAGCTGACCATCTTCCATGGCTTGGCTACTGAAAATTGTCCTCTCCGAGTAAAATTGTGTATTATTCTTTCTATTTTGTCCCTGCATGTCAAAAAGCTGGGTTGAACCTTTTTTTCTGTTACAGATATTTGTTGTGAAATTATTGTGCCTCGACTCTTGGACAAAAGGACTGTGAATGTGATTCCTTTTAGGGGAGACACGTGGCTCCTGTTTGGCATGTGACTTTTTCTTTCCCTTTCTCTGAATTATATGATTGTATGAAATAATAATTGAAAATACACCGTCCTGTACTTTGGCTTCTTAT TTCCCGCGGCTGCAACTGGAAGTCAGCGACCGTAAACGCTAAAGAGGTTGAGAATCACACCGGTAAATCGTCAGCGGAATTGTGAACCATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCACTGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGGAGGCATTTTCTCCAGTTGAACTAATGGTTGCAGCAAACTCATTATGGGATTTTCAGGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGTTGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGATCTTAATAGATTGCAGGTTTCTCTTTCGTTATGTGTGCCCGTTACCGTCTTATCAATGCCGATGCTCGTGACACGTATTATTCATCAATTGGTTTGCTTTTCTGCTTCCCGTTCTGCTATTTTGTATTGTGCGAGCCATAGGCAAGTTTCCAAAACAGTAAACAGGAAGTTCCTCTGTTTCTGTATTTCATAGGCTTCGCGACATCACCTGTTGCCCCCATTGTTTACATACAAATCCTTGTCCAGCTGACCATCTTCCATGGCTTGGCTACTGAAAATTGTCCTCTCCGAGTAAAATTGTGTATTATTCTTTCTATTTTGTCCCTGCATGTCAAAAAGCTGGGTTGAACCTTTTTTTCTGTTACAGATATTTGTTGTGAAATTATTGTGCCTCGACTCTTGGACAAAAGGACTGTGAATGTGATTCCTTTTAGGGGAGACACGTGGCTCCTGTTTGGCATGTGACTTTTTCTTTCCCTTTCTCTGAATTATATGATTGTATGAAATAATAATTGAAAATACACCGTCCTGTACTTTGGCTTCTTAT ATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCACTGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGGAGGCATTTTCTCCAGTTGAACTAATGGTTGCAGCAAACTCATTATGGGATTTTCAGGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGTTGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGA MSADLRCVIVAVDGSEESMGALRWAFENLKLRSSAPDSTDGTFIVLHVQPPPTIAAGLSPGPIPFGGPSDLEVPAFTAAIESHQRRITAAILDHASRICSEEAFSPVELMVAANSLWDFQVNVETKVVIGDPKEKICEVAENLHADLLVMGSRAFGPIKRMFLGSVSNYCTNHVECPVIIVKDKKRGSSA Homology
BLAST of Carg08242 vs. NCBI nr
Match: KAG7029681.1 (Universal stress protein A-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Carg08242 vs. NCBI nr
Match: KAG6598738.1 (Universal stress protein A-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335.9 bits (860), Expect = 2.3e-88 Identity = 171/190 (90.00%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of Carg08242 vs. NCBI nr
Match: XP_022961627.1 (universal stress protein PHOS34-like [Cucurbita moschata] >XP_022961628.1 universal stress protein PHOS34-like [Cucurbita moschata]) HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87 Identity = 169/190 (88.95%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Carg08242 vs. NCBI nr
Match: XP_023547229.1 (universal stress protein PHOS34 [Cucurbita pepo subsp. pepo] >XP_023547230.1 universal stress protein PHOS34 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87 Identity = 167/190 (87.89%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Carg08242 vs. NCBI nr
Match: XP_022997274.1 (universal stress protein PHOS34 [Cucurbita maxima] >XP_022997275.1 universal stress protein PHOS34 [Cucurbita maxima]) HSP 1 Score: 330.5 bits (846), Expect = 9.6e-87 Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.9e-11 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.6e-10 Identity = 55/182 (30.22%), Postives = 85/182 (46.70%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy Swiss-Prot
Match: P74148 (Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1388 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.5e-07 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06 Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy TrEMBL
Match: A0A6J1HCC8 (universal stress protein PHOS34-like OS=Cucurbita moschata OX=3662 GN=LOC111462345 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 169/190 (88.95%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy TrEMBL
Match: A0A6J1KAZ9 (universal stress protein PHOS34 OS=Cucurbita maxima OX=3661 GN=LOC111492229 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.7e-87 Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy TrEMBL
Match: A0A1S3BBJ3 (universal stress protein Sll1388 OS=Cucumis melo OX=3656 GN=LOC103488134 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83 Identity = 161/190 (84.74%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy TrEMBL
Match: A0A5A7VGQ9 (Universal stress protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004160 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83 Identity = 161/190 (84.74%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of Carg08242 vs. ExPASy TrEMBL
Match: A0A6J1BRL9 (universal stress protein PHOS34 OS=Momordica charantia OX=3673 GN=LOC111005122 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.1e-83 Identity = 159/190 (83.68%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Carg08242 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 245.4 bits (625), Expect = 3.8e-65 Identity = 124/189 (65.61%), Postives = 146/189 (77.25%), Query Frame = 0
BLAST of Carg08242 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 121.7 bits (304), Expect = 6.3e-28 Identity = 68/181 (37.57%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of Carg08242 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27 Identity = 72/184 (39.13%), Postives = 100/184 (54.35%), Query Frame = 0
BLAST of Carg08242 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 118.6 bits (296), Expect = 5.4e-27 Identity = 73/184 (39.67%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of Carg08242 vs. TAIR 10
Match: AT3G58450.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23 Identity = 68/186 (36.56%), Postives = 92/186 (49.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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