Carg08216 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg08216
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondihydrofolate reductase-like
LocationCarg_Chr05: 2697588 .. 2699599 (+)
RNA-Seq ExpressionCarg08216
SyntenyCarg08216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGTACGACTGCTTAACCCTAATTTCTTCCGAAAATCGCAAACTCTCGTTTATTTTGTTTGTTTATTCTCTTTTCTTCCATTGCAGGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGTAATTTCCTTTTAATTTTTCCTAATTAGCCAAACGGAGCTTAATCGAGTATCCTGTTGATGAACTTCGTTGAATTTGACAATTTCAATCTCTTCGCGAACAATTTCAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGTAACCTAACAGCAGCCTGCTGCTATTACGTTACAAATCCATCTGAATTCTCCAAAATAAACGTTAAAAGTGAAATCGAGGTTTTGAGGCAGAGGTGCATTAATTGTTGCAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGGTACCTCCTCCACATGGCGTTTGTCCTTTTTTGAAAGTAGTTTCCAATATAATGATTCTTTACATCGTTGCTTTGAAAACAAACAAGCCACCGAATGCATAATTTTAGGCATTTAGTTTTGGAATTAAATAACAGCTTGTCTTAATTTCTTGAATTACGTCCTAGGAGTCGAACAATCCATCATATTTTATGCATCAAAATAATTATAGACAGTTGACAATTCAAATTAAGGAGGTTGTTATGAATGTATTATTAAAAAATGTGAACGGACAATACTTTGATTGGTCTTTTTTTTCAAAAATAAGAGAATCAAATCCCTAAATTCTTAGGTGGGTATCACTTTAAAACTCCAAATAGCGCAAAACTTCACTAATTGAATCAATTTAGACATCCAATCCATTATAGACTTTCATTTTAAAGCCATTGATGCAAGAGTTCTTAAGATCCCTTGATTTGATATTTTCCTTTGATTATATGAACTGTTTAGATTCTTGAATTTAAAATTTGAAATAAATTAATCAACTTCTAGAACCTGTGTGTGAAATGCTGAAAAGGGTTATATCATGGTGGTAGGTAAGGAAGATTTCTTGATGCCCCACGGACAGAAGCTTCTGGAATCATATATAGATCCAGTAATAATTAATCATCCTAAAGGCCACACAATACCAAGACTGGGTAATATACAATTTCAACTCATTTCACTTTTCCATCCTTAATTTCTGATGCTGATTTAATTATCTCAACTTTATATTTTCAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAATAATAGTCTTAAAAGTCGCATTGGACTATCAATTATGCAGCCTTAGCCTTAAACAATGATGGAGCTAATTGTATAGTTCATTCGATGTATTTTATTTTAAATATTTCAAAACTATTCTCTCCGTAGGGTTGAGCCCTTGTATTCCATCAAGTGTTACACATCATTAATCTTACACACAACAAGTAATTTGTCATAGTTTCTGGATCTGTCTTGTGTATAATTAGTAATCTTTTATGGTTCCGAGGGTTTATGGTAAATTTGCCCCAAGGATAAGACAAATACATAATGAGAATTTTCTTACC

mRNA sequence

ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAATAATAGTCTTAAAAGTCGCATTGGACTATCAATTATGCAGCCTTAGCCTTAAACAATGATGGAGCTAATTGTATAGTTCATTCGATGTATTTTATTTTAAATATTTCAAAACTATTCTCTCCGTAGGGTTGAGCCCTTGTATTCCATCAAGTGTTACACATCATTAATCTTACACACAACAAGTAATTTGTCATAGTTTCTGGATCTGTCTTGTGTATAATTAGTAATCTTTTATGGTTCCGAGGGTTTATGGTAAATTTGCCCCAAGGATAAGACAAATACATAATGAGAATTTTCTTACC

Coding sequence (CDS)

ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAA

Protein sequence

MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFLDDEGLEVMESFIEKISKMLDEAEE
Homology
BLAST of Carg08216 vs. NCBI nr
Match: KAG7029656.1 (dfr1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.2 bits (1123), Expect = 8.3e-119
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHFLDDEGLEVMESFIEKISKMLDEAEE 216
           PVIGCPSLHFLDDEGLEVMESFIEKISKMLDEAEE
Sbjct: 181 PVIGCPSLHFLDDEGLEVMESFIEKISKMLDEAEE 215

BLAST of Carg08216 vs. NCBI nr
Match: XP_022961839.1 (dihydrofolate reductase-like [Cucurbita moschata])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 213/249 (85.54%), Postives = 214/249 (85.94%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS LSPLLCSPISKSRSPEFHL+RIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSSLSPLLCSPISKSRSPEFHLQRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
           PVIGCPSLHF                                  LDDEGLEVMESFIEKI
Sbjct: 181 PVIGCPSLHFLGKEDFLMPHGQKLLESYIEPVIINHPKGHTIPRLDDEGLEVMESFIEKI 240

BLAST of Carg08216 vs. NCBI nr
Match: XP_023545459.1 (dihydrofolate reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 7.0e-110
Identity = 209/249 (83.94%), Postives = 211/249 (84.74%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS LSPLLCSPISK RSPEFHL+RIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSSLSPLLCSPISKYRSPEFHLQRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
             IGCPSLHF                                  LDD+GLEVMESFIEKI
Sbjct: 181 SAIGCPSLHFLGKEDFLMPHGQKLLESYIEPVVINHPKGHTIPRLDDKGLEVMESFIEKI 240

BLAST of Carg08216 vs. NCBI nr
Match: XP_022997250.1 (dihydrofolate reductase-like [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 9.2e-110
Identity = 208/249 (83.53%), Postives = 211/249 (84.74%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS LSPLLCSPISK+RSPEFHL+RIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSSLSPLLCSPISKTRSPEFHLQRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKG+ALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGMALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
             IGCPSLHF                                  LDD GLEVMESFIEKI
Sbjct: 181 SAIGCPSLHFLGKEDFLMPHGQKLLESYIEPVVINHPKGHTIPRLDDRGLEVMESFIEKI 240

BLAST of Carg08216 vs. NCBI nr
Match: KAG6598716.1 (hypothetical protein SDJN03_08494, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 6.2e-98
Identity = 188/222 (84.68%), Postives = 188/222 (84.68%), Query Frame = 0

Query: 28  MGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEG 87
           MGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEG
Sbjct: 1   MGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEG 60

Query: 88  IFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQA 147
           IFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQA
Sbjct: 61  IFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQA 120

Query: 148 KGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHF----------------- 207
           KGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHF                 
Sbjct: 121 KGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFLGKEDFLMPHGQKLLES 180

Query: 208 -----------------LDDEGLEVMESFIEKISKMLDEAEE 216
                            LDDEGLEVMESFIEKISKMLDEAEE
Sbjct: 181 YIDPVIINHPKGHTIPRLDDEGLEVMESFIEKISKMLDEAEE 222

BLAST of Carg08216 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 7.5e-14
Identity = 53/167 (31.74%), Postives = 80/167 (47.90%), Query Frame = 0

Query: 39  RFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSD------------IE 98
           + LCLHG+  SG +  K++G     + +  +L F   P  A+ ++D            + 
Sbjct: 6   KVLCLHGWIQSGPVFSKKMGSVQKYLSKYAELHFPTGPVVADEEADPNDEEEKKRLAALG 65

Query: 99  GIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQ 158
           G  +   F WF+       Y ++DE L  I  YM + GPFDG +GFSQGA + A L  + 
Sbjct: 66  GEQNGGKFGWFEVEDFKNTYGSWDESLECINQYMQEKGPFDGLIGFSQGAGIGAMLAQML 125

Query: 159 AKG---IALTKVPKIKFVIIVSGAKFRSQSVA-EKAYSPVIGCPSLH 190
             G       + P  KFV+ V G  FR++    +  Y+P +  PSLH
Sbjct: 126 QPGQPPNPYVQHPPFKFVVFVGG--FRAEKPEFDHFYNPKLTTPSLH 170

BLAST of Carg08216 vs. ExPASy Swiss-Prot
Match: Q94AC1 (Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=STR6 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-13
Identity = 58/183 (31.69%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 35  RRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPF----------PAEGKSD 94
           RRK R LCLHGFR + +  K + G     +    +L F+DAP           P  G  +
Sbjct: 351 RRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSGVCN 410

Query: 95  ------IEGIFDPPYFEWF-----QFSP--EFTEYRNFDECLSFIEDYMLKHGPFDGFLG 154
                 +   FD P    +     QF P    T+   FD+ L++++    + GPFDG LG
Sbjct: 411 KKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDGILG 470

Query: 155 FSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFL 195
           FSQGA ++AA+ G Q +   L      +F ++ SG  F    + E      I CPSLH  
Sbjct: 471 FSQGAAMAAAVCGKQEQ---LVGEIDFRFCVLCSG--FTPWPLLEMKEKRSIKCPSLHIF 528

BLAST of Carg08216 vs. ExPASy Swiss-Prot
Match: Q9VDL1 (Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 57/192 (29.69%), Postives = 85/192 (44.27%), Query Frame = 0

Query: 33  EIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEG-KSDIEGIFDP 92
           EI  K R LCLHG+R +G   K ++G +     +  +  F+ AP  A+  +S  E +  P
Sbjct: 26  EITEKVRVLCLHGYRQNGEAFKNKLGSFRKFANKYAEFVFITAPHVAKALESAAEPV--P 85

Query: 93  PYFEW--------FQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALP 152
               W        F+ + +      F E L  +E+     GPF G LGFSQGA     + 
Sbjct: 86  EQRSWWANKDDGSFKGTNKGGPAFGFQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLIC 145

Query: 153 GLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAE-KAYSPVIGCPSLHFLDDEGLEVMESF 212
           GL  K   LT + + +F ++ SG  F S S+    AY   I  P+LH        + +  
Sbjct: 146 GLAKK--KLTSI-RPEFAVLASG--FLSGSLVHMSAYEEAISIPTLHIYGQTDEIIPKEM 205

Query: 213 IEKISKMLDEAE 215
            E ++     AE
Sbjct: 206 SESLAARFKNAE 210

BLAST of Carg08216 vs. ExPASy Swiss-Prot
Match: Q3SZ07 (Esterase OVCA2 OS=Bos taurus OX=9913 GN=OVCA2 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 54/172 (31.40%), Postives = 73/172 (42.44%), Query Frame = 0

Query: 39  RFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEGI---------F 98
           R LCL GFR S    +++ G    ++  + +L  L  P P    +  EG           
Sbjct: 8   RILCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVVDAAGSEGARPDSGPCPPE 67

Query: 99  DPPYFEWFQFS--------PEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAA 158
           + P   WF            E T  R  +E L  +   + K GPFDG LGFSQGA L+A 
Sbjct: 68  EQPQGWWFSEQEADVFLALEEPTACRGLEEALETVAQALNKLGPFDGILGFSQGAALAAL 127

Query: 159 LPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFLDD 194
           +  L   G    + P  +FVI+VSG   R   + E      +  PSLH   D
Sbjct: 128 VCALGQGGD--PRFPLPRFVILVSGFCPRGLGLMEPIMQGPLSLPSLHVFGD 177

BLAST of Carg08216 vs. ExPASy Swiss-Prot
Match: Q29BR3 (Esterase GA18864 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA18864 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 52/167 (31.14%), Postives = 75/167 (44.91%), Query Frame = 0

Query: 33  EIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAP-FPAEGKSDIEGIFDP 92
           EI  K R LCLHG+R  G   K ++G +     +  +  F+ AP   A  +S  E +  P
Sbjct: 26  EITEKVRVLCLHGYRQDGDAFKNKLGSFRKFTSKYAEFVFISAPHIAAPLESAAEPV--P 85

Query: 93  PYFEWFQFSPEFT--------EYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALP 152
               W+    + T            F + L  +E+     GPF G LGFSQGA     + 
Sbjct: 86  EQRSWWANKDDGTFKGTNKGGPAFGFQDSLRLVEEAWKTQGPFQGLLGFSQGACFVGLIC 145

Query: 153 GLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAE-KAYSPVIGCPSLH 190
           GL  K   LT + + +F ++ SG  F S S+    AY   +  P+LH
Sbjct: 146 GLAKK--KLTSI-RPEFAVLSSG--FVSGSLVHMSAYEEPVSIPTLH 185

BLAST of Carg08216 vs. ExPASy TrEMBL
Match: A0A6J1HF66 (dihydrofolate reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111462484 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.6e-113
Identity = 213/249 (85.54%), Postives = 214/249 (85.94%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS LSPLLCSPISKSRSPEFHL+RIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSSLSPLLCSPISKSRSPEFHLQRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
           PVIGCPSLHF                                  LDDEGLEVMESFIEKI
Sbjct: 181 PVIGCPSLHFLGKEDFLMPHGQKLLESYIEPVIINHPKGHTIPRLDDEGLEVMESFIEKI 240

BLAST of Carg08216 vs. ExPASy TrEMBL
Match: A0A6J1K928 (dihydrofolate reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492210 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110
Identity = 208/249 (83.53%), Postives = 211/249 (84.74%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS LSPLLCSPISK+RSPEFHL+RIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW
Sbjct: 1   MSSLSPLLCSPISKTRSPEFHLQRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM
Sbjct: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           LKHGPFDGFLGFSQGAILSAALPGLQAKG+ALTKVPKIKFVIIVSGAKFRSQSVAEKAYS
Sbjct: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGMALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
             IGCPSLHF                                  LDD GLEVMESFIEKI
Sbjct: 181 SAIGCPSLHFLGKEDFLMPHGQKLLESYIEPVVINHPKGHTIPRLDDRGLEVMESFIEKI 240

BLAST of Carg08216 vs. ExPASy TrEMBL
Match: A0A1S3BC97 (dihydrofolate reductase-like OS=Cucumis melo OX=3656 GN=LOC103488098 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.9e-90
Identity = 176/249 (70.68%), Postives = 190/249 (76.31%), Query Frame = 0

Query: 1   MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKW 60
           MS   P L S    S  P+FH   +PIMG+D +I  KPRFLCLHGFRTS AILKKQVGKW
Sbjct: 1   MSSFFPSLSSHQFLSTIPQFHFPTVPIMGSDQKIFTKPRFLCLHGFRTSAAILKKQVGKW 60

Query: 61  PDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYM 120
           P SVL+QLDL FLDAPFPAEGKSD+EGIFDPPYFEWFQFSPEFTEYRNFDECLSFIE+YM
Sbjct: 61  PPSVLDQLDLHFLDAPFPAEGKSDVEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIENYM 120

Query: 121 LKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYS 180
           ++HGPFDGFLGFSQGAILSAALPG QAKGIALTKVPKIKFVIIVSGAKFRS+SVAEKAYS
Sbjct: 121 IEHGPFDGFLGFSQGAILSAALPGFQAKGIALTKVPKIKFVIIVSGAKFRSESVAEKAYS 180

Query: 181 PVIGCPSLHF----------------------------------LDDEGLEVMESFIEKI 216
             IGCPSLHF                                  LDD+ LEVMESFI++I
Sbjct: 181 TPIGCPSLHFLGEEDFLMPHGKKLLESYIEPTIITHPKGHTIPRLDDKALEVMESFIQRI 240

BLAST of Carg08216 vs. ExPASy TrEMBL
Match: A0A0A0LNX4 (FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369800 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.8e-88
Identity = 173/244 (70.90%), Postives = 186/244 (76.23%), Query Frame = 0

Query: 6   PLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVL 65
           P L S  S +  P+F    IPIMG+D +   KPRFLCLHGFRTS AILKKQVGKWP SVL
Sbjct: 6   PSLSSHQSLTTIPQFRFPTIPIMGSDQKFFTKPRFLCLHGFRTSAAILKKQVGKWPLSVL 65

Query: 66  EQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGP 125
           +QLDL FLDAPFPAEGKSD+EGIFDPPYFEWFQFSPEFTEYRNFDECLSFIE+YM+KHGP
Sbjct: 66  DQLDLHFLDAPFPAEGKSDVEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIENYMIKHGP 125

Query: 126 FDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGC 185
           FDGFLGFSQGAILSAALPG QAKGIALTKVPKIKFVIIVSGAKFRS+SVAEKAYS  IGC
Sbjct: 126 FDGFLGFSQGAILSAALPGFQAKGIALTKVPKIKFVIIVSGAKFRSESVAEKAYSTPIGC 185

Query: 186 PSLHF----------------------------------LDDEGLEVMESFIEKISKMLD 216
           PSLHF                                  LDD+ LEVMESFI +ISK+L+
Sbjct: 186 PSLHFLGEEDFLMPHGKKLLESYIEPTIITHPKGHTIPRLDDKALEVMESFIHRISKILN 245

BLAST of Carg08216 vs. ExPASy TrEMBL
Match: A0A6J1BPA7 (dihydrofolate reductase-like OS=Momordica charantia OX=3673 GN=LOC111004563 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 172/255 (67.45%), Postives = 188/255 (73.73%), Query Frame = 0

Query: 1   MSLLSPLLCS-------PISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAIL 60
           MS  SP L S       P S+SRSP+   +R  IMG++ +I+RKPRFLCLHGFRTSG IL
Sbjct: 1   MSSFSPPLRSAQLHTPIPESESRSPQIVFKRASIMGSEAKIQRKPRFLCLHGFRTSGQIL 60

Query: 61  KKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECL 120
           KKQVGKWP SVL+  DL FLDAPFPAEGKSD+EGIFDPPYFEWFQFS +  EY+NFDECL
Sbjct: 61  KKQVGKWPSSVLDNFDLHFLDAPFPAEGKSDVEGIFDPPYFEWFQFSADMMEYQNFDECL 120

Query: 121 SFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQS 180
           SFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQ KGIALTKVPKIKFV+IVSGAKFRS S
Sbjct: 121 SFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQEKGIALTKVPKIKFVVIVSGAKFRSPS 180

Query: 181 VAEKAYSPVIGCPSLHFLDDE----------------------------------GLEVM 215
           +AEKAYSP IGCPSLHFL DE                                  GL+VM
Sbjct: 181 LAEKAYSPSIGCPSLHFLGDEDFLMPHGLKLLESYIEPLVINHPKGHTVPRLDEKGLKVM 240

BLAST of Carg08216 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-65
Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 0

Query: 28  MGTDG-EIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIE 87
           MG++G  I RKPRFLCLHGFRTSG I+K Q+ KWP SV+++LDL FLDAPFP +GKSD+E
Sbjct: 1   MGSEGRSIARKPRFLCLHGFRTSGEIMKIQLHKWPKSVIDRLDLVFLDAPFPCQGKSDVE 60

Query: 88  GIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQ 147
           GIFDPPY+EWFQF+ EFTEY NF++CL ++ED M+K GPFDG +GFSQGAILS  LPGLQ
Sbjct: 61  GIFDPPYYEWFQFNKEFTEYTNFEKCLEYLEDRMIKLGPFDGLIGFSQGAILSGGLPGLQ 120

Query: 148 AKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFLDDE------GLEVME 203
           AKGIA  KVPKIKFVII+ GAK +S  +AE AYS  +   SLHFL +       G +++E
Sbjct: 121 AKGIAFQKVPKIKFVIIIGGAKLKSAKLAENAYSSSLETLSLHFLGETDFLKPYGTQLIE 180

BLAST of Carg08216 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 245.0 bits (624), Expect = 5.6e-65
Identity = 115/165 (69.70%), Postives = 136/165 (82.42%), Query Frame = 0

Query: 28  MGTDG-EIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIE 87
           MG++G  I RKPRFLCLHGFRTSG I+K Q+ KWP SV+++LDL FLDAPFP +GKSD+E
Sbjct: 1   MGSEGRSIARKPRFLCLHGFRTSGEIMKIQLHKWPKSVIDRLDLVFLDAPFPCQGKSDVE 60

Query: 88  GIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQ 147
           GIFDPPY+EWFQF+ EFTEY NF++CL ++ED M+K GPFDG +GFSQGAILS  LPGLQ
Sbjct: 61  GIFDPPYYEWFQFNKEFTEYTNFEKCLEYLEDRMIKLGPFDGLIGFSQGAILSGGLPGLQ 120

Query: 148 AKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFL 192
           AKGIA  KVPKIKFVII+ GAK +S  +AE AYS  +   SLHFL
Sbjct: 121 AKGIAFQKVPKIKFVIIIGGAKLKSAKLAENAYSSSLETLSLHFL 165

BLAST of Carg08216 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 237.7 bits (605), Expect = 9.0e-63
Identity = 113/206 (54.85%), Postives = 148/206 (71.84%), Query Frame = 0

Query: 12  ISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLD 71
           ++ + +PE HL+            + PR LCLHGFRTSG IL+  +GKWPD++L  LDLD
Sbjct: 15  LTTAMAPEIHLK-----------PKNPRILCLHGFRTSGRILQAGIGKWPDTILRDLDLD 74

Query: 72  FLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLG 131
           FLDAPFPA GKSD+E  FDPPY+EW+Q +  F EYRNF+ECL++IEDYM+K+GPFDG LG
Sbjct: 75  FLDAPFPATGKSDVERFFDPPYYEWYQANKGFKEYRNFEECLAYIEDYMIKNGPFDGLLG 134

Query: 132 FSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAK-----FRSQSVAEKAYSPVIGCP 191
           FSQGA L+AA+PG+Q +G ALTKVPK+KF++I+SGAK     F     A  A+S  + CP
Sbjct: 135 FSQGAFLTAAIPGMQEQGSALTKVPKVKFLVIISGAKIPGLMFGEPKAAVNAFSSPVRCP 194

Query: 192 SLHFLDD------EGLEVMESFIEKI 207
           SLHF+ +      EG  ++ESF+E +
Sbjct: 195 SLHFIGERDFLKIEGEVLVESFVEPV 209

BLAST of Carg08216 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14
Identity = 58/183 (31.69%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 35  RRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPF----------PAEGKSD 94
           RRK R LCLHGFR + +  K + G     +    +L F+DAP           P  G  +
Sbjct: 351 RRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSGVCN 410

Query: 95  ------IEGIFDPPYFEWF-----QFSP--EFTEYRNFDECLSFIEDYMLKHGPFDGFLG 154
                 +   FD P    +     QF P    T+   FD+ L++++    + GPFDG LG
Sbjct: 411 KKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDGILG 470

Query: 155 FSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFL 195
           FSQGA ++AA+ G Q +   L      +F ++ SG  F    + E      I CPSLH  
Sbjct: 471 FSQGAAMAAAVCGKQEQ---LVGEIDFRFCVLCSG--FTPWPLLEMKEKRSIKCPSLHIF 528

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7029656.18.3e-119100.00dfr1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022961839.12.0e-11285.54dihydrofolate reductase-like [Cucurbita moschata][more]
XP_023545459.17.0e-11083.94dihydrofolate reductase-like [Cucurbita pepo subsp. pepo][more]
XP_022997250.19.2e-11083.53dihydrofolate reductase-like [Cucurbita maxima][more]
KAG6598716.16.2e-9884.68hypothetical protein SDJN03_08494, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
P365917.5e-1431.74Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O... [more]
Q94AC18.3e-1331.69Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=ST... [more]
Q9VDL11.0e-1029.69Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1[more]
Q3SZ071.7e-1031.40Esterase OVCA2 OS=Bos taurus OX=9913 GN=OVCA2 PE=2 SV=1[more]
Q29BR31.5e-0931.14Esterase GA18864 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA18864 P... [more]
Match NameE-valueIdentityDescription
A0A6J1HF669.6e-11385.54dihydrofolate reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111462484 PE=4 ... [more]
A0A6J1K9284.4e-11083.53dihydrofolate reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492210 PE=4 SV... [more]
A0A1S3BC973.9e-9070.68dihydrofolate reductase-like OS=Cucumis melo OX=3656 GN=LOC103488098 PE=4 SV=1[more]
A0A0A0LNX44.8e-8870.90FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369800 PE=4 S... [more]
A0A6J1BPA73.4e-8667.45dihydrofolate reductase-like OS=Momordica charantia OX=3673 GN=LOC111004563 PE=4... [more]
Match NameE-valueIdentityDescription
AT4G24380.11.9e-6564.84INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and deri... [more]
AT4G24380.25.6e-6569.70CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidop... [more]
AT5G65400.19.0e-6354.85alpha/beta-Hydrolases superfamily protein [more]
AT1G09280.15.9e-1431.69CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolas... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..215
NoneNo IPR availablePANTHERPTHR48070:SF5DIHYDROFOLATE REDUCTASEcoord: 32..202
NoneNo IPR availablePANTHERPTHR48070ESTERASE OVCA2coord: 32..202
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 34..215
e-value: 3.2E-39
score: 136.8
IPR005645Serine hydrolase FSHPFAMPF03959FSH1coord: 36..191
e-value: 5.3E-38
score: 130.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08216-RACarg08216-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus