Carg08104 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08104
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 2295721 .. 2298073 (+)
RNA-Seq Expression	Carg08104
Synteny	Carg08104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGTAAGTTTTAGCCGGCTTTTCTTCTTCTTCTTCTTCTGATTCTGCTTGTTGCGGTCTTGTTTTTTGTTCTGTGTTTTTTTTTTTTCGTTCTCAGTGCATTTGCCTTGCTTGGATCTTCTTCATGAATTGATTTTCGTTATCATGGACTTCGTGTTGCTCATTTTGAAGGCGAGAGATCGAGAGGCTACTAATTAACTTGTTTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGTTCCATCACTCTCACTCGTGAATGATCTTGCTCTTTTGAGAATCGTGCGAGCATTCATTCGGCTATTCTTTCGTCACTTCTGGTTTATCTTTCTCTGTGCATTTTCCTTGCTCGGATGCCTTGATGAATTGATGCTAGTGATCATTGACTTGAGCGAGATATAGAGAGGCAATAAGTAGCTTAAGCCTTCGCTGAGGCAGAATTTGCGTGGTGTAGTTTGTTGTTCAGATTGTCCGTCACTTCCGAATTTTCTTGTTCTGTGGATATTAGCTCAATCATTTAGAAAAATCGTACGAGACAAGATCCTTCCAGCCATTCGTCCGTCATTCCTTAAATCTCATTCACTGTGCATTTTCCTTGTTTGGATATCTTGATGAATGGATGTTCGTTATTGTAGACATCGTTCTGCTTATTTATTTCCGAAGCGAGAAATGGAAACACAAATGCACCAAGAGAGAGAATTCGGGAAGAACGGACGAATAGTTGGATGGACCTCGTACTATCTTGTTTTACCACATGCTTGTGCTACAGTCCACAGAATAAGGTAGTAGATGTTCATTATCATAGAGCTCATCTTGCTTAGTTTCAAAAGGCGAGAGTTAGGAGAGGCATCTAACTTTCTTAGAAGAGGCGGAAGTTGCACGGTGAAAGCTTATTTAGCTGGTCTTTCATTTCTTAGTAATCATGTAGCAAAATTGTGCTAGTGTCCATCAAGCTATTTGAGTAAATGAGGAACGGAAGATGCTTGCGGCTACGCATAAGGATCGCTTAGTTGGCACTCTAATTCTGTTTGGAGCTTTATTCTTGAGTCAACATATGCACAGCCGCAAAGATGAAATTTAAACCGGAATCTGAAAACTTAAGCTAAGAGTTTTGATGATGTTTATCATATTTTTAAAATTTAACCAAACTTTTTGTTCTTCGGCCAGAAAACACTTGGTAGATGGATAGAACCATCATTCCTACCAATATCTGTGTTAACCATGAATCTGTAACCGTGGTTTTTATTGGGCCAGTTGTTATAGTTAAAGCTTTTAGGAAGCTACATATCTGTACCAAAGCAACAGTTCTAGTACCCGTACTTGTATTAGGAGTGGTAGCTGGCTATGCTTGTTTAGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCATAACAGTGGCATGGTTTCTTTAGTCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGTCTTTTTTGAGTGCATTATCTTCTTACCATGTTCATACTTGGCCTTTCTTCTTCGGTCTCATATAGAGGAACTTTTACTTATTAGAGCATAGCTTTTAGAGTTCATCTGATTTGATGTTCCAAGAAAGTTTGTGTCTGCCTCAGTAGTAATGCTTGTAATAGTAGGTCTTCATAGTCGGAATCTTTCATATTCCGCATCTTAGTTTTTGTTAATTCTAGTATATTACTTGAGTTGAATGTATTGAAGAATGTTTTTTGTTTGAGACCTTCGATTATGTTAATTTAAGGTGTTATACACTACTTTTTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

mRNA sequence

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

Coding sequence (CDS)

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

Protein sequence

MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFRCAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTSAVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVYELFKFLNSLYLICFDFYCSLA

Homology

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: KAG7030928.1 (hypothetical protein SDJN02_04965, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.0 bits (868), Expect = 2.6e-89
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVYELFKFLNSLYLICFDFYCSLA 180
           AVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVYELFKFLNSLYLICFDFYCSLA
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVYELFKFLNSLYLICFDFYCSLA 179

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: KAG6600269.1 (hypothetical protein SDJN03_05502, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRR SFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRFSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_022942490.1 (uncharacterized protein LOC111447509 isoform X2 [Cucurbita moschata])

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-69
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQ ERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_022942489.1 (uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 151/186 (81.18%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE-----VNFLMIL----FIRVYELFKFLNSLYLIC 178
           AVSTEVSKSLSNQ ERSMQLNSEGLE        L+ L    F+  + L     SL+   
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFAL 180

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_023532263.1 (uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 2.3e-66
Identity = 138/146 (94.52%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFF+ELDSSRR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFSELDSSRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. ExPASy TrEMBL
Match: A0A6J1FWE6 (uncharacterized protein LOC111447509 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQ ERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. ExPASy TrEMBL
Match: A0A6J1FRG9 (uncharacterized protein LOC111447509 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.8e-68
Identity = 151/186 (81.18%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  CAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE-----VNFLMIL----FIRVYELFKFLNSLYLIC 178
           AVSTEVSKSLSNQ ERSMQLNSEGLE        L+ L    F+  + L     SL+   
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFAL 180

[Close]

BLAST of Carg08104 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVS LSFSQ SFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQD+HKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. ExPASy TrEMBL
Match: A0A6J1JNG1 (uncharacterized protein LOC111488465 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQILKSTVS LSFSQ SFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQD+HKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.2e-56
Identity = 119/146 (81.51%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQ+LKS VSPLS SQP+FG +SSRF ++ DS+RR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           CAAQDA KESNGEEPPESLFMKELKKRG+TPTSLLED+NS +F LG E TG   D S  S
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-15
Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = 0


Query: 2   AALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFRC 61
           ++L+I+K   SP+SF +    +       +L+  +R  R    R   R      R+S   
Sbjct: 4   SSLEIVKLCGSPVSFPRHKSPI-------KLECRKRVFRLPNSRSWHRL-----RVS-SS 63

Query: 62  AAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTSA 121
           A      +S GEEPPESLFMKELK+RG+TPTSLL+D    + E+      GN   S T+A
Sbjct: 64  ALNGGDNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGN--SSKTTA 123

Query: 122 VSTEVSKSLSNQRERSMQLNSEGLE 147
            +    KSL NQRERS+ LNSEGLE
Sbjct: 124 TTPAFDKSLLNQRERSLALNSEGLE 133

The following BLAST results are available for this feature:

BLAST of Carg08104 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030928.1	2.6e-89	100.00	hypothetical protein SDJN02_04965, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600269.1	1.2e-70	99.32	hypothetical protein SDJN03_05502, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942490.1	2.9e-69	97.95	uncharacterized protein LOC111447509 isoform X2 [Cucurbita moschata]	[more]
XP_022942489.1	1.6e-67	81.18	uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata]	[more]
XP_023532263.1	2.3e-66	94.52	uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08104 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWE6	1.4e-69	97.95	uncharacterized protein LOC111447509 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FRG9	7.8e-68	81.18	uncharacterized protein LOC111447509 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JUF8	1.2e-65	93.84	uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JNG1	1.2e-65	93.84	uncharacterized protein LOC111488465 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1D5D9	5.2e-56	81.51	uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Carg08104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50020.1	2.6e-15	42.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699	F2J10.10 PROTEIN	coord: 26..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08104-RA	Carg08104-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane