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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATCAGGAAACAAGACTCGGCTTTCAACTCTCAAAGGCGAATACTTACTGCTCAAAGAACTGTCAAGGGTAGACTTGCTAGCGGAAGTAGACAAACGGGAGAGAGTCGTGGAAGAGGCATCGAGAACTGGCCGGAACGACGCCGCCGCAATCGAAAACCACCTAGTCGAAGAGAGGAACAAGAGAAAAGCAAAGAAGAAGAGGCAAAGAAACAGAGATCTCCGAGTAAAGAACTGAACTTGCGAGCTCGACCTGGCAAACCGCTTCCTCTTCCGCCGCTGTTGTTCCCAATCCATTAA mRNA sequence ATGATCAGGAAACAAGACTCGGCTTTCAACTCTCAAAGGCGAATACTTACTGCTCAAAGAACTGTCAAGGGTAGACTTGCTAGCGGAAGTAGACAAACGGGAGAGAGTCGTGGAAGAGGCATCGAGAACTGGCCGGAACGACGCCGCCGCAATCGAAAACCACCTAGTCGAAGAGAGGAACAAGAGAAAAGCAAAGAAGAAGAGGCAAAGAAACAGAGATCTCCGAGTAAAGAACTGAACTTGCGAGCTCGACCTGGCAAACCGCTTCCTCTTCCGCCGCTGTTGTTCCCAATCCATTAA Coding sequence (CDS) ATGATCAGGAAACAAGACTCGGCTTTCAACTCTCAAAGGCGAATACTTACTGCTCAAAGAACTGTCAAGGGTAGACTTGCTAGCGGAAGTAGACAAACGGGAGAGAGTCGTGGAAGAGGCATCGAGAACTGGCCGGAACGACGCCGCCGCAATCGAAAACCACCTAGTCGAAGAGAGGAACAAGAGAAAAGCAAAGAAGAAGAGGCAAAGAAACAGAGATCTCCGAGTAAAGAACTGAACTTGCGAGCTCGACCTGGCAAACCGCTTCCTCTTCCGCCGCTGTTGTTCCCAATCCATTAA Protein sequence MIRKQDSAFNSQRRILTAQRTVKGRLASGSRQTGESRGRGIENWPERRRRNRKPPSRREEQEKSKEEEAKKQRSPSKELNLRARPGKPLPLPPLLFPIH
Homology
BLAST of Carg07989 vs. NCBI nr
Match: KAG7030814.1 (hypothetical protein SDJN02_04851, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 Query: 1 MIRKQDSAFNSQRRILTAQRTVKGRLASGSRQTGESRGRGIENWPERRRRNRKPPSRREE 60 MIRKQDSAFNSQRRILTAQRTVKGRLASGSRQTGESRGRGIENWPERRRRNRKPPSRREE Sbjct: 1 MIRKQDSAFNSQRRILTAQRTVKGRLASGSRQTGESRGRGIENWPERRRRNRKPPSRREE 60
Query: 61 QEKSKEEEAKKQRSPSKELNLRARPGKPLPLPPLLFPIH 100 QEKSKEEEAKKQRSPSKELNLRARPGKPLPLPPLLFPIH Sbjct: 61 QEKSKEEEAKKQRSPSKELNLRARPGKPLPLPPLLFPIH 99
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7030814.1 | 1.1e-41 | 100.00 | hypothetical protein SDJN02_04851, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..99 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..80 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..37 |
Relationships
The following mRNA feature(s) are a part of this gene:
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