Carg07782 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07782
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr07: 1141176 .. 1146389 (+)
RNA-Seq ExpressionCarg07782
SyntenyCarg07782
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAACAAAGTCTCTAATTACAGTGGAATCCCAACAACTCGCGCTTCAACATCCTGTAACTCACATTTTTGACTCCCGACCCCACAGTCCAATCTATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCACGCCCATATCATTGTTTCCGGATTCCATAGAAGTCGATCACTTCTCACCAAGCTTCTTTCACTGATTTGTGCCGCTGGTTCAATCACGTATGCTCGTCAGTTGTTGCCCACTGTCCCAAACCCTGATTCATTTCTGTTCAATTCCCTTCTCAAAGCGACTTCCAAGTATGGTTTTTCTGTTGATGCCGTCCTGTTTTACCGTCATATGCTCTTCTTGGGTGTTTCCCAGTCGAATTATACATTTACGTCTGTTATCAAAGCCTGTGCAGATCTTTCAGCTCTCAGGTTGGGTAGAGAAATTCATTCTCACGTTGTGGTTTCTGGTTATGGATCTGATATGTACGTTCAGGCTGCACTTATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTGGCCCAGAAGGTGTTCGATGAAATGCCCCAAAGAACAACTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAGAACGGATTACCAGGGAAATCAATTGATTTATTTAATCTGATGATAGGGTCGGGCTTTCAACCTGATTCAGCTACGGTAGTAAGCTTATTGTCTTCCTGTTCTCAGCTGGGAGCTCTTGATTTCGGATGCTGGTTGCATGATTATGCCAATAGTAATAGTTTCGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGTAAGGAATGTTGTTACTTGGACAGCCATGATTTCAGGGTATGGGATGCATGGTTATGGCGAGCAAGCAATGAAGCTTTTCAATGAAATGAGAGCTTATGGTCCTCGCCCTAACAATATCACATTCGTTGCTGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGATGATGGTCGTCGGGCATTTTCAAGCATGAAGGAAGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAAGGATGCTTATCAATTCATTAGAAAATTTCTTCCTGAAGAGCCAGGTCCTGCAGTTTGGACTTCAATGCTTGGGGCTTGCAGAATGCATAAAATTTTTGACCTTGGAGTTAAGGTTGCAGAACATGTTTTAGCAGTTGAACCAGAAAACCCTGGTCATTATGTAATGCTTTCTAACATATATGCATTGGCCGGTAGAATGGATCGAGTAGAGATGGTGCGAAACATGATGGTTAGACGACGCCTAAAGAAGCAAGTAGGTTATAGCACCATAGAGATCAATCAGAAAACCTATATGTTTAGCATGGGTGACAAGTCTCATCCTGAAACAAATGCTATCTATAGGTATTTAGATGAATTAATGGGCCGTTGTAGTGAATCAGGCTATATACCAGCATTGGAGTCCTTGATGCATGATTTGGAAGAAGAAGAAAGGGATTATGCCCTTAGATATCATAGTGAAAAGCTTGCCCTAGCGTTTGGTTTACTTAAAACCAATCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGAATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTGTTATTGCTGATAGAGAAATTATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGATGGTGCATGTTCTTGTCTTGATTATTGGTGATAATTTCAATTCATAATCATCAGCTTCAGTATTCTAGCTGTTACTGAGACTTCATTGGATTTACGAGCTAATCCACCACAAATCATGGAAAGGTCATTGCGTTTTCTAATTGATGACTGATCCTGTCACTGGAGCTCCTCGGTATTTTTAAATAGCTAGGCGATCTGGTTGTTAACTTGATCGGTGCTCAGGTTGTCAAGGCCCTTTTTTATTCAATGATTGATCCCTAAAGCAGGTACCAACCAGGTGTTTTCTACTCATTTGAAAATTGTAGCATCAGATAAGATCTCTTTGGTTGTTTGGAAAAGTGTGCTTATGCTAATTATGTTCTAACTTCCTTTTGAAAACAGATATGTATTGGTATTGCATTTATTCTGGCATATGGAAATTATTTGTAACAAGCAATTAGATTGTTGTCTTTTTATTCTGTATCATAATTCTGAGAAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGGCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTAATGTACTTATCTTCGTCTTCTGAAGATTTAGAACTTCTTCCTCGTTGAAGTAAAAGCTATTCTAACCTATTCTTTTTGCAATTCGTCAATGTTCTTTCAGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGAATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTCACCCATTTCTTTGATACTTGTCTATCATCCTGTTCTTTCTCTCTCTCTCATGCTCACACCAACAATGTTTCTTGACTGTAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTATGCATTATCTCAATAAATTTAGGTCTGCTCCATTATATTCAGCACGAAACTATTTTATCACTTTTCAACATGTTTGTTATCTTAATGTCTCGGGTCAAAGAGATTCCTCAAGAGGAAATGCTTCCCCATGTTGGTGTAGGTGAATTTTGTGAGACTAAGGAGGCATACTATTTTGGGTATGGCACTAATCTGATATATATGTATATATTTAATTTATCAACATCTAATACTATAATAGTTCATTGTCATCATCATCGTTACTGCCTTGCTAAATTATTTTTATACTATTTTGTCTGTGACTTGTTAAATTGTCTTACTGGACATTACATGTACCAGTTATATAATTCATCCGCTACTCTTATGTGCCCTTGGGCGGATAGCAGAAGATGATGGGAACCACTTTGGAAACAAAAGACTGGACTTTTCTGGTCAGACTTGGAGACCTGTTTAAAATGGTTATTATTATTATTTGACAAGTTTGTTTTTTGTGGTTGCAAATATTATACTTTTCTCATTTTGAGAGTTTCTCATCATCTTTTATTTGTTTGAATCAGCTATTTAGAAAGTTAACAAGAGAAGGGATCGGTTACGTCCAAAGGGTCGCAATAAAAAAAAAAAAAACAGGATCTTATACAAGTAAGGATCAATCCAGGCGAGGCTTATTCTGACACCTACACTCACTGTGACATCCATTCATCACTGATTTTGGGCGTTTGTGCTTCAATTATTCCATTTCCTGACCATAATCAGGTTTGCTAGTTTTGCTATCTCTGACTGATTCATTTTTTTTTTGTGTATTTATCCCCACGTAACACTTATCAATCTGCTATGGGTAAAGAAGCTATAGGAATATATGTCACCAACTAGCAATGTCAAATGGTATGCTCTACTTCAATTTCAAAAAAAGTTGTAGACTGTCTACATAAATAATCAAAGTTGGAAGCCTCAATAATTGGTATCTAAAAAAGTCTGGTTTGAAACTGGGTCAGCGAAATACGGGGAGTAGACGCCTTTCAGTGTGTGGGACTGGTTCATCTATTGAAGGTAGACATCTCAAATTCAATATTCTTTAGTTTTCCTTTCTTGTCGGGCTGTTCACGTCTGTGACTTATTAGGCTCATCTAAATTGCTTTAATTAGCTTTTGGACTACTCTCTTATCCACCATTAATGTACTAGATTATCAGCTGCTCTCTTGGTCTAATAACTACAATTTTGTCGGTGAAGTCCCGTTCATTTATGATTTCTTTATATCTATATATATACACACACATCAGAATTGTTTGCTTGTAAATTAGTTTTATTGAATTTTATATTAAGTCTGTATGCAAATATTGGAGGATAAGATTAGACCCACATGGGGTGTTCCTTTTGCAATAACTACAAAAGACATTGCCTCCTTCTCATATGGACAAAGGCCATTTGAATAAGAAGGGTGCAACAAATATCAAGATTCTTTTTTCTTTTTTTAATTTATTTATTAGGATAGCCTATATTTCAAACATATTTGTATATGTGTGATTTGTTTTTTTTTTTTTAATGTAATTATGACTATTGTATTTTTATAAGAATACAACTTCCCCATTAAAAATATGTATTTATGGGTGTGGGGTTTTAGTTTTATCTTTTAACTTTTTCCATAGTTGATAGTATTACTTTCAATAAATTCTTATATTTGGAGAAATGATTTTTGGAAGTTTAATAAAATTTTGTTATTTATCCCATTATCAGATATTTACATTATCTTTCTGTTCACAGGTGGCCTCATATTTTCTTTAATTTAATTAATCAGTCTTAGAAGAAAATGGTAATGGAGATGTATTGCGGTCTTCTCTGGTTCATCAACTCTCACCTCATTTTTCTGCAGTTAATGTTGTGGATCAGCCCCTCTTCAAGCTAGTAGTTTTGCTCAGTATCTTCGGTCGATTGTCAGCTTGTTCAATTGACATTAGATGATTCCAGTCACTAGACACATCTTTCTTCTTGGTGGTGAAACTATTATGTTGTCTAGGCCATGACTACTCTAGAAGATAAGCAGTCACTAGACACATCTTTCTTCTTGGTGGTGAAATTATTATGTTGTCTAGGCCATGACTACTCTAGAAGATAAGCAGTAGTTGCTTCCCTTCTTCTAGTTGCTTGCTCAGATTTTGAATCTTTATCTTAGGTTCGTCAATCTTCTCCAGGCTAGGACTACTCTAGATGATAAGCAGTCTGGAGCAGTTGCTCTCCTTATTCCAATTGCGTACTCAGATTTTGAATCTTTATCTTAG

mRNA sequence

ATGAACAAAACAAAGTCTCTAATTACAGTGGAATCCCAACAACTCGCGCTTCAACATCCTGTAACTCACATTTTTGACTCCCGACCCCACAGTCCAATCTATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCACGCCCATATCATTGTTTCCGGATTCCATAGAAGTCGATCACTTCTCACCAAGCTTCTTTCACTGATTTGTGCCGCTGGTTCAATCACGTATGCTCGTCAGTTGTTGCCCACTGTCCCAAACCCTGATTCATTTCTGTTCAATTCCCTTCTCAAAGCGACTTCCAAGTATGGTTTTTCTGTTGATGCCGTCCTGTTTTACCGTCATATGCTCTTCTTGGGTGTTTCCCAGTCGAATTATACATTTACGTCTGTTATCAAAGCCTGTGCAGATCTTTCAGCTCTCAGGTTGGGTAGAGAAATTCATTCTCACGTTGTGGTTTCTGGTTATGGATCTGATATGTACGTTCAGGCTGCACTTATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTGGCCCAGAAGGTGTTCGATGAAATGCCCCAAAGAACAACTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAGAACGGATTACCAGGGAAATCAATTGATTTATTTAATCTGATGATAGGGTCGGGCTTTCAACCTGATTCAGCTACGGTAGTAAGCTTATTGTCTTCCTGTTCTCAGCTGGGAGCTCTTGATTTCGGATGCTGGTTGCATGATTATGCCAATAGTAATAGTTTCGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGTAAGGAATGTTGTTACTTGGACAGCCATGATTTCAGGGTATGGGATGCATGGTTATGGCGAGCAAGCAATGAAGCTTTTCAATGAAATGAGAGCTTATGGTCCTCGCCCTAACAATATCACATTCGTTGCTGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGATGATGGTCGTCGGGCATTTTCAAGCATGAAGGAAGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAAGGATGCTTATCAATTCATTAGAAAATTTCTTCCTGAAGAGCCAGGTCCTGCAGTTTGGACTTCAATGCTTGGGGCTTGCAGAATGCATAAAATTTTTGACCTTGGAGTTAAGGTTGCAGAACATGTTTTAGCAGTTGAACCAGAAAACCCTGGTCATTATGTAATGCTTTCTAACATATATGCATTGGCCGGTAGAATGGATCGAGTAGAGATGGTGCGAAACATGATGGTTAGACGACGCCTAAAGAAGCAAGTAGGTTATAGCACCATAGAGATCAATCAGAAAACCTATATGTTTAGCATGGGTGACAAGTCTCATCCTGAAACAAATGCTATCTATAGGTATTTAGATGAATTAATGGGCCGTTGTAGTGAATCAGGCTATATACCAGCATTGGAGTCCTTGATGCATGATTTGGAAGAAGAAGAAAGGGATTATGCCCTTAGATATCATAGTGAAAAGCTTGCCCTAGCGTTTGGTTTACTTAAAACCAATCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGAATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTGTTATTGCTGATAGAGAAATTATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGATGGTGCATGCGATCTGGTTGTTAACTTGATCGGTGCTCAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGGCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGAATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTTCGTCAATCTTCTCCAGGCTAGGACTACTCTAGATGATAAGCAGTCTGGAGCAGTTGCTCTCCTTATTCCAATTGCGTACTCAGATTTTGAATCTTTATCTTAG

Coding sequence (CDS)

ATGAACAAAACAAAGTCTCTAATTACAGTGGAATCCCAACAACTCGCGCTTCAACATCCTGTAACTCACATTTTTGACTCCCGACCCCACAGTCCAATCTATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCACGCCCATATCATTGTTTCCGGATTCCATAGAAGTCGATCACTTCTCACCAAGCTTCTTTCACTGATTTGTGCCGCTGGTTCAATCACGTATGCTCGTCAGTTGTTGCCCACTGTCCCAAACCCTGATTCATTTCTGTTCAATTCCCTTCTCAAAGCGACTTCCAAGTATGGTTTTTCTGTTGATGCCGTCCTGTTTTACCGTCATATGCTCTTCTTGGGTGTTTCCCAGTCGAATTATACATTTACGTCTGTTATCAAAGCCTGTGCAGATCTTTCAGCTCTCAGGTTGGGTAGAGAAATTCATTCTCACGTTGTGGTTTCTGGTTATGGATCTGATATGTACGTTCAGGCTGCACTTATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTGGCCCAGAAGGTGTTCGATGAAATGCCCCAAAGAACAACTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAGAACGGATTACCAGGGAAATCAATTGATTTATTTAATCTGATGATAGGGTCGGGCTTTCAACCTGATTCAGCTACGGTAGTAAGCTTATTGTCTTCCTGTTCTCAGCTGGGAGCTCTTGATTTCGGATGCTGGTTGCATGATTATGCCAATAGTAATAGTTTCGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGTAAGGAATGTTGTTACTTGGACAGCCATGATTTCAGGGTATGGGATGCATGGTTATGGCGAGCAAGCAATGAAGCTTTTCAATGAAATGAGAGCTTATGGTCCTCGCCCTAACAATATCACATTCGTTGCTGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGATGATGGTCGTCGGGCATTTTCAAGCATGAAGGAAGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAAGGATGCTTATCAATTCATTAGAAAATTTCTTCCTGAAGAGCCAGGTCCTGCAGTTTGGACTTCAATGCTTGGGGCTTGCAGAATGCATAAAATTTTTGACCTTGGAGTTAAGGTTGCAGAACATGTTTTAGCAGTTGAACCAGAAAACCCTGGTCATTATGTAATGCTTTCTAACATATATGCATTGGCCGGTAGAATGGATCGAGTAGAGATGGTGCGAAACATGATGGTTAGACGACGCCTAAAGAAGCAAGTAGGTTATAGCACCATAGAGATCAATCAGAAAACCTATATGTTTAGCATGGGTGACAAGTCTCATCCTGAAACAAATGCTATCTATAGGTATTTAGATGAATTAATGGGCCGTTGTAGTGAATCAGGCTATATACCAGCATTGGAGTCCTTGATGCATGATTTGGAAGAAGAAGAAAGGGATTATGCCCTTAGATATCATAGTGAAAAGCTTGCCCTAGCGTTTGGTTTACTTAAAACCAATCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGAATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTGTTATTGCTGATAGAGAAATTATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGATGGTGCATGCGATCTGGTTGTTAACTTGATCGGTGCTCAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGGCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGAATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTTCGTCAATCTTCTCCAGGCTAGGACTACTCTAGATGATAAGCAGTCTGGAGCAGTTGCTCTCCTTATTCCAATTGCGTACTCAGATTTTGAATCTTTATCTTAG

Protein sequence

MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACDLVVNLIGAQDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYGFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAREFVPDKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKFVNLLQARTTLDDKQSGAVALLIPIAYSDFESLS
Homology
[Close]
BLAST of Carg07782 vs. NCBI nr
Match: KAG7026573.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1621.7 bits (4198), Expect = 0.0e+00
Identity = 806/806 (100.00%), Postives = 806/806 (100.00%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACDLV 600
           LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACDLV
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACDLV 600

Query: 601 VNLIGAQDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYGFVEDVWS 660
           VNLIGAQDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYGFVEDVWS
Sbjct: 601 VNLIGAQDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYGFVEDVWS 660

Query: 661 MAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAREFVPDKDLL 720
           MAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAREFVPDKDLL
Sbjct: 661 MAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAREFVPDKDLL 720

Query: 721 EHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKFVNLLQAR 780
           EHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKFVNLLQAR
Sbjct: 721 EHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKFVNLLQAR 780

Query: 781 TTLDDKQSGAVALLIPIAYSDFESLS 807
           TTLDDKQSGAVALLIPIAYSDFESLS
Sbjct: 781 TTLDDKQSGAVALLIPIAYSDFESLS 806

[Close]
BLAST of Carg07782 vs. NCBI nr
Match: XP_022926430.1 (pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 596/597 (99.83%), Postives = 596/597 (99.83%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 597

[Close]
BLAST of Carg07782 vs. NCBI nr
Match: KAG6594603.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 595/597 (99.66%), Postives = 595/597 (99.66%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGV QSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVFQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 597

[Close]
BLAST of Carg07782 vs. NCBI nr
Match: XP_023517887.1 (pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517888.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517889.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517890.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 589/597 (98.66%), Postives = 594/597 (99.50%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSL+CAAGSITYAR+LLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLVCAAGSITYARRLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGV QSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALY+KAGDM
Sbjct: 121 LFLGVYQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYSKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLP KSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPAKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK+RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKLRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKE+
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEI 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 597

[Close]
BLAST of Carg07782 vs. NCBI nr
Match: XP_023003171.1 (pentatricopeptide repeat-containing protein At2g33760 [Cucurbita maxima])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 578/588 (98.30%), Postives = 585/588 (99.49%), Query Frame = 0 

Query: 10  VESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 69
           +ESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL
Sbjct: 32  LESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 91

Query: 70  LSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN 129
           LSL+CAAGSITYAR+LLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN
Sbjct: 92  LSLVCAAGSITYARRLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN 151

Query: 130 YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE 189
           YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE
Sbjct: 152 YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE 211

Query: 190 MPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFG 249
           MPQRTTIAWNSLISGYEQNGLP KSIDLFN MIGSGFQPDSATVVSLLSSCSQLGALDFG
Sbjct: 212 MPQRTTIAWNSLISGYEQNGLPAKSIDLFNPMIGSGFQPDSATVVSLLSSCSQLGALDFG 271

Query: 250 CWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH 309
           CWLHDYANSNSF+LNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH
Sbjct: 272 CWLHDYANSNSFNLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH 331

Query: 310 GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEH 369
           GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGR+AFSSMKEVYGLVPGVEH
Sbjct: 332 GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRQAFSSMKEVYGLVPGVEH 391

Query: 370 HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAV 429
           HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGVKVAEHVLAV
Sbjct: 392 HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAV 451

Query: 430 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS 489
           EPENPGHYVMLSNIYALAGRMD+VEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS
Sbjct: 452 EPENPGHYVMLSNIYALAGRMDQVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS 511

Query: 490 HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 549
           HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSE+LALAFGLLKTN
Sbjct: 512 HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSERLALAFGLLKTN 571

Query: 550 QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 572 QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 619

[Close]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 2.5e-211
Identity = 348/571 (60.95%), Postives = 449/571 (78.63%), Query Frame = 0 

Query: 30  HSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLICAAGSITYARQLLPTV 89
           +S  Y A+++AGPR++ LQQVHAH+IV+G+ RSRSLLTKL++L C+A +I Y   L  +V
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67

Query: 90  PNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGR 149
           P PD FLFNS++K+TSK    +  V +YR ML   VS SNYTFTSVIK+CADLSALR+G+
Sbjct: 68  PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127

Query: 150 EIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNG 209
            +H H VVSG+G D YVQAAL+  Y+K GDM+ A++VFD MP+++ +AWNSL+SG+EQNG
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187

Query: 210 LPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGT 269
           L  ++I +F  M  SGF+PDSAT VSLLS+C+Q GA+  G W+H Y  S   DLNV LGT
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT 247

Query: 270 SLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMR-AYGPR 329
           +LIN+Y+RCG+V KAREVFD MK  NV  WTAMIS YG HGYG+QA++LFN+M    GP 
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307

Query: 330 PNNITFVAVLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQ 389
           PNN+TFVAVLSACAH+GL+++GR  +  M + Y L+PGVEHHVCMVDM GRAG L +AY+
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367

Query: 390 FIRKF--LPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYAL 449
           FI +     +   PA+WT+MLGAC+MH+ +DLGV++A+ ++A+EP+NPGH+VMLSNIYAL
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYAL 427

Query: 450 AGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGR 509
           +G+ D V  +R+ M+R  L+KQVGYS IE+  KTYMFSMGD+SH ET  IYRYL+ L+ R
Sbjct: 428 SGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISR 487

Query: 510 CSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDC 569
           C E GY P  E +MH +EEEE+++ALRYHSEKLA+AFGLLKT     I IVKNLRICEDC
Sbjct: 488 CKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDC 547

Query: 570 HSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           HSA K+IS++++R+I VRDK RFHHF++G+C
Sbjct: 548 HSAFKYISIVSNRQITVRDKLRFHHFQNGSC 577

[Close]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match: Q9ZVF4 (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.0e-132
Identity = 239/586 (40.78%), Postives = 368/586 (62.80%), Query Frame = 0 

Query: 15  LALQHPVTHIFDSRPHSPIYAALLQA-GPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLI 74
           LA Q P+T          + + LL+A   + + L+++HA ++ +GF    SLLT+LL  +
Sbjct: 2   LAKQTPLT--------KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENL 61

Query: 75  CAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFT 134
              G + YARQ+   +  P  FL+N+L K   +     +++L Y+ M  LGV    +T+ 
Sbjct: 62  VVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYP 121

Query: 135 SVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQR 194
            V+KA + L     G  +H+HVV  G+G    V   L+ +Y K G++  A+ +F+ M  +
Sbjct: 122 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 181

Query: 195 TTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLH 254
             +AWN+ ++   Q G    +++ FN M     Q DS TVVS+LS+C QLG+L+ G  ++
Sbjct: 182 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 241

Query: 255 DYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGE 314
           D A     D N+++  + ++M+ +CGN   AR +F+ MK RNVV+W+ MI GY M+G   
Sbjct: 242 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 301

Query: 315 QAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV--YGLVPGVEHHV 374
           +A+ LF  M+  G RPN +TF+ VLSAC+H+GL+++G+R FS M +     L P  EH+ 
Sbjct: 302 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 361

Query: 375 CMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEP 434
           CMVD+ GR+GLL++AY+FI+K +P EP   +W ++LGAC +H+   LG KVA+ ++   P
Sbjct: 362 CMVDLLGRSGLLEEAYEFIKK-MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 421

Query: 435 ENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHP 494
           +   ++V+LSNIYA AG+ D V+ VR+ M +   KK   YS++E   K + F+ GDKSHP
Sbjct: 422 DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 481

Query: 495 ETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQG 554
           ++ AIY  LDE++ +  + GY+P   S+ HD+E EE++ +L +HSEKLA+AFGL+K   G
Sbjct: 482 QSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPG 541

Query: 555 ETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
             IR++KNLR C+DCH+  K +S +   EII+RDK RFHHF++G C
Sbjct: 542 HPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVC 578

[Close]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.2e-127
Identity = 225/554 (40.61%), Postives = 342/554 (61.73%), Query Frame = 0 

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKA 103
           LR   Q+H+    +G +    +LT  +SL    G I     L      PD   +N+++  
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296

Query: 104 TSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSD 163
            +  G +  ++  ++ ++  G    + T  S++     L  +     IH + + S + S 
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSH 356

Query: 164 MYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIG 223
             V  AL  +Y+K  +++ A+K+FDE P+++  +WN++ISGY QNGL   +I LF  M  
Sbjct: 357 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 416

Query: 224 SGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSK 283
           S F P+  T+  +LS+C+QLGAL  G W+HD   S  F+ ++ + T+LI MY +CG++++
Sbjct: 417 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 476

Query: 284 AREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAH 343
           AR +FD M  +N VTW  MISGYG+HG G++A+ +F EM   G  P  +TF+ VL AC+H
Sbjct: 477 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 536

Query: 344 SGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVW 403
           +GL+ +G   F+SM   YG  P V+H+ CMVD+ GRAG L+ A QFI + +  EPG +VW
Sbjct: 537 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI-EAMSIEPGSSVW 596

Query: 404 TSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRR 463
            ++LGACR+HK  +L   V+E +  ++P+N G++V+LSNI++      +   VR    +R
Sbjct: 597 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 656

Query: 464 RLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDL 523
           +L K  GY+ IEI +  ++F+ GD+SHP+   IY  L++L G+  E+GY P  E  +HD+
Sbjct: 657 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 716

Query: 524 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIV 583
           EEEER+  ++ HSE+LA+AFGL+ T  G  IRI+KNLR+C DCH+  K IS I +R I+V
Sbjct: 717 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 776

Query: 584 RDKFRFHHFKDGAC 598
           RD  RFHHFKDG C
Sbjct: 777 RDANRFHHFKDGVC 786

[Close]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-126
Identity = 229/561 (40.82%), Postives = 356/561 (63.46%), Query Frame = 0 

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTK----LLSLICAAGSITYARQLLPTVPNP-DSFLFN 103
           +  L+Q+HA  I  G   S + L K     L  + +   ++YA ++   +  P + F++N
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 104 SLLKATSKYGFSVDAVLFYRHMLFLG-VSQSNYTFTSVIKACADLSALRLGREIHSHVVV 163
           +L++  ++ G S+ A   YR M   G V    +T+  +IKA   ++ +RLG  IHS V+ 
Sbjct: 90  TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149

Query: 164 SGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDL 223
           SG+GS +YVQ +L+ LYA  GD+  A KVFD+MP++  +AWNS+I+G+ +NG P +++ L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209

Query: 224 FNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTR 283
           +  M   G +PD  T+VSLLS+C+++GAL  G  +H Y        N+     L+++Y R
Sbjct: 210 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269

Query: 284 CGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMRA-YGPRPNNITFVA 343
           CG V +A+ +FD M  +N V+WT++I G  ++G+G++A++LF  M +  G  P  ITFV 
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329

Query: 344 VLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPE 403
           +L AC+H G++ +G   F  M+E Y + P +EH  CMVD+  RAG +K AY++I K +P 
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI-KSMPM 389

Query: 404 EPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMV 463
           +P   +W ++LGAC +H   DL       +L +EP + G YV+LSN+YA   R   V+ +
Sbjct: 390 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 449

Query: 464 RNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPAL 523
           R  M+R  +KK  G+S +E+  + + F MGDKSHP+++AIY  L E+ GR    GY+P +
Sbjct: 450 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 509

Query: 524 ESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVI 583
            ++  D+EEEE++ A+ YHSEK+A+AF L+ T +   I +VKNLR+C DCH AIK +S +
Sbjct: 510 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 569

Query: 584 ADREIIVRDKFRFHHFKDGAC 598
            +REI+VRD+ RFHHFK+G+C
Sbjct: 570 YNREIVVRDRSRFHHFKNGSC 589

[Close]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.2e-126
Identity = 234/599 (39.07%), Postives = 357/599 (59.60%), Query Frame = 0 

Query: 35  AALLQAGPRLRNLQQVHAHIIVSGF---HRSRSLLTKLLSLICAAGSITYARQLLPTVPN 94
           A L+     +  + Q+HA I+        R   L  KL     + G I ++  L     +
Sbjct: 33  AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92

Query: 95  PDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGREI 154
           PD FLF + +   S  G    A L Y  +L   ++ + +TF+S++K+C+  S    G+ I
Sbjct: 93  PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 152

Query: 155 HSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRT----------------- 214
           H+HV+  G G D YV   L+ +YAK GD+  AQKVFD MP+R+                 
Sbjct: 153 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 212

Query: 215 --------------TIAWNSLISGYEQNGLPGKSIDLFNLMIGSGF-QPDSATVVSLLSS 274
                          ++WN +I GY Q+G P  ++ LF  ++  G  +PD  TVV+ LS+
Sbjct: 213 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 272

Query: 275 CSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTW 334
           CSQ+GAL+ G W+H +  S+   LNV + T LI+MY++CG++ +A  VF+    +++V W
Sbjct: 273 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 332

Query: 335 TAMISGYGMHGYGEQAMKLFNEMRAY-GPRPNNITFVAVLSACAHSGLIDDGRRAFSSMK 394
            AMI+GY MHGY + A++LFNEM+   G +P +ITF+  L ACAH+GL+++G R F SM 
Sbjct: 333 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 392

Query: 395 EVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDL 454
           + YG+ P +EH+ C+V + GRAG LK AY+ I K +  +    +W+S+LG+C++H  F L
Sbjct: 393 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI-KNMNMDADSVLWSSVLGSCKLHGDFVL 452

Query: 455 GVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQ 514
           G ++AE+++ +  +N G YV+LSNIYA  G  + V  VRN+M  + + K+ G STIEI  
Sbjct: 453 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 512

Query: 515 KTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEK 574
           K + F  GD+ H ++  IY  L ++  R    GY+P   +++ DLEE E++ +L+ HSE+
Sbjct: 513 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 572

Query: 575 LALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LA+A+GL+ T  G  ++I KNLR+C DCH+  K IS I  R+I++RD+ RFHHF DG+C
Sbjct: 573 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSC 626

[Close]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match: A0A6J1EL35 (pentatricopeptide repeat-containing protein At2g33760 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433589 PE=3 SV=1)

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 596/597 (99.83%), Postives = 596/597 (99.83%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 597

[Close]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match: A0A6J1KND5 (pentatricopeptide repeat-containing protein At2g33760 OS=Cucurbita maxima OX=3661 GN=LOC111496866 PE=3 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 578/588 (98.30%), Postives = 585/588 (99.49%), Query Frame = 0 

Query: 10  VESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 69
           +ESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL
Sbjct: 32  LESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 91

Query: 70  LSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN 129
           LSL+CAAGSITYAR+LLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN
Sbjct: 92  LSLVCAAGSITYARRLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN 151

Query: 130 YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE 189
           YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE
Sbjct: 152 YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE 211

Query: 190 MPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFG 249
           MPQRTTIAWNSLISGYEQNGLP KSIDLFN MIGSGFQPDSATVVSLLSSCSQLGALDFG
Sbjct: 212 MPQRTTIAWNSLISGYEQNGLPAKSIDLFNPMIGSGFQPDSATVVSLLSSCSQLGALDFG 271

Query: 250 CWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH 309
           CWLHDYANSNSF+LNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH
Sbjct: 272 CWLHDYANSNSFNLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH 331

Query: 310 GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEH 369
           GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGR+AFSSMKEVYGLVPGVEH
Sbjct: 332 GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRQAFSSMKEVYGLVPGVEH 391

Query: 370 HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAV 429
           HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGVKVAEHVLAV
Sbjct: 392 HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAV 451

Query: 430 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS 489
           EPENPGHYVMLSNIYALAGRMD+VEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS
Sbjct: 452 EPENPGHYVMLSNIYALAGRMDQVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS 511

Query: 490 HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 549
           HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSE+LALAFGLLKTN
Sbjct: 512 HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSERLALAFGLLKTN 571

Query: 550 QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC
Sbjct: 572 QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 619

[Close]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match: A0A6J1EEW7 (pentatricopeptide repeat-containing protein At2g33760 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433589 PE=3 SV=1)

HSP 1 Score: 1107.0 bits (2862), Expect = 0.0e+00
Identity = 550/551 (99.82%), Postives = 550/551 (99.82%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHK FDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQG 552
           LAFGLLKTNQG
Sbjct: 541 LAFGLLKTNQG 551

[Close]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match: A0A5D3CPN1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007480 PE=3 SV=1)

HSP 1 Score: 1067.0 bits (2758), Expect = 3.9e-308
Identity = 520/597 (87.10%), Postives = 557/597 (93.30%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNK K    +++QQLA QHPVT  FD++  SP+Y ALL++GPRLRNLQQVHAHIIVSG H
Sbjct: 1   MNKIK----LQTQQLAFQHPVTRNFDTQSRSPVYEALLRSGPRLRNLQQVHAHIIVSGLH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKL+SL+C AGSITYAR+L PTVPNPDSFLF+SLLK TSK+GFS+DAVLFYRHM
Sbjct: 61  RSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LF G   SNYTFTSVIKACADLSALRLG+EIHSHV+V GYGSDMYVQAALIALYAKA DM
Sbjct: 121 LFSGAPPSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISG+EQNGLP +SIDLF+LM+ SG QPD AT+VSLLSSC
Sbjct: 181 KVAKKVFDAMPQRTIIAWNSLISGFEQNGLPQESIDLFHLMMKSGLQPDPATIVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDY+N N FDLNVVLGTSLINMYTRCGNVSKA+EVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYSNVNGFDLNVVLGTSLINMYTRCGNVSKAQEVFDSMKERNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHG+G+QAMKLF EMRAYGPRPNNITFVAVLSACAHSGLIDDGRR FSSMKEV
Sbjct: 301 AMISGYGMHGHGKQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEH+VCMVDMFGRAGLL DAYQFI+K LP+EPGPAVWTSMLGACRMH+ FDLGV
Sbjct: 361 YGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKILPKEPGPAVWTSMLGACRMHRNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELM RCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLL TNQGETIRIVKNLR+CEDCHSAIKHIS+IADREIIVRDKFRFHHFKDG+C
Sbjct: 541 LAFGLLNTNQGETIRIVKNLRMCEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSC 593

[Close]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match: A0A1S4DTH4 (pentatricopeptide repeat-containing protein At2g33760 OS=Cucumis melo OX=3656 GN=LOC103484519 PE=3 SV=1)

HSP 1 Score: 1067.0 bits (2758), Expect = 3.9e-308
Identity = 520/597 (87.10%), Postives = 557/597 (93.30%), Query Frame = 0 

Query: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNK K    +++QQLA QHPVT  FD++  SP+Y ALL++GPRLRNLQQVHAHIIVSG H
Sbjct: 1   MNKIK----LQTQQLAFQHPVTRNFDTQSRSPVYEALLRSGPRLRNLQQVHAHIIVSGLH 60

Query: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120
           RSRSLLTKL+SL+C AGSITYAR+L PTVPNPDSFLF+SLLK TSK+GFS+DAVLFYRHM
Sbjct: 61  RSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDAVLFYRHM 120

Query: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180
           LF G   SNYTFTSVIKACADLSALRLG+EIHSHV+V GYGSDMYVQAALIALYAKA DM
Sbjct: 121 LFSGAPPSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDM 180

Query: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISG+EQNGLP +SIDLF+LM+ SG QPD AT+VSLLSSC
Sbjct: 181 KVAKKVFDAMPQRTIIAWNSLISGFEQNGLPQESIDLFHLMMKSGLQPDPATIVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300
           SQLGALDFGCWLHDY+N N FDLNVVLGTSLINMYTRCGNVSKA+EVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYSNVNGFDLNVVLGTSLINMYTRCGNVSKAQEVFDSMKERNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360
           AMISGYGMHG+G+QAMKLF EMRAYGPRPNNITFVAVLSACAHSGLIDDGRR FSSMKEV
Sbjct: 301 AMISGYGMHGHGKQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGV 420
           YGLVPGVEH+VCMVDMFGRAGLL DAYQFI+K LP+EPGPAVWTSMLGACRMH+ FDLGV
Sbjct: 361 YGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKILPKEPGPAVWTSMLGACRMHRNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKT 480

Query: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELM RCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LAFGLL TNQGETIRIVKNLR+CEDCHSAIKHIS+IADREIIVRDKFRFHHFKDG+C
Sbjct: 541 LAFGLLNTNQGETIRIVKNLRMCEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSC 593

[Close]
BLAST of Carg07782 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 736.9 bits (1901), Expect = 1.8e-212
Identity = 348/571 (60.95%), Postives = 449/571 (78.63%), Query Frame = 0 

Query: 30  HSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLICAAGSITYARQLLPTV 89
           +S  Y A+++AGPR++ LQQVHAH+IV+G+ RSRSLLTKL++L C+A +I Y   L  +V
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67

Query: 90  PNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGR 149
           P PD FLFNS++K+TSK    +  V +YR ML   VS SNYTFTSVIK+CADLSALR+G+
Sbjct: 68  PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127

Query: 150 EIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNG 209
            +H H VVSG+G D YVQAAL+  Y+K GDM+ A++VFD MP+++ +AWNSL+SG+EQNG
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187

Query: 210 LPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGT 269
           L  ++I +F  M  SGF+PDSAT VSLLS+C+Q GA+  G W+H Y  S   DLNV LGT
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT 247

Query: 270 SLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMR-AYGPR 329
           +LIN+Y+RCG+V KAREVFD MK  NV  WTAMIS YG HGYG+QA++LFN+M    GP 
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307

Query: 330 PNNITFVAVLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQ 389
           PNN+TFVAVLSACAH+GL+++GR  +  M + Y L+PGVEHHVCMVDM GRAG L +AY+
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367

Query: 390 FIRKF--LPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYAL 449
           FI +     +   PA+WT+MLGAC+MH+ +DLGV++A+ ++A+EP+NPGH+VMLSNIYAL
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYAL 427

Query: 450 AGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGR 509
           +G+ D V  +R+ M+R  L+KQVGYS IE+  KTYMFSMGD+SH ET  IYRYL+ L+ R
Sbjct: 428 SGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISR 487

Query: 510 CSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDC 569
           C E GY P  E +MH +EEEE+++ALRYHSEKLA+AFGLLKT     I IVKNLRICEDC
Sbjct: 488 CKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDC 547

Query: 570 HSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           HSA K+IS++++R+I VRDK RFHHF++G+C
Sbjct: 548 HSAFKYISIVSNRQITVRDKLRFHHFQNGSC 577

[Close]
BLAST of Carg07782 vs. TAIR 10
Match: AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 475.7 bits (1223), Expect = 7.3e-134
Identity = 239/586 (40.78%), Postives = 368/586 (62.80%), Query Frame = 0 

Query: 15  LALQHPVTHIFDSRPHSPIYAALLQA-GPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLI 74
           LA Q P+T          + + LL+A   + + L+++HA ++ +GF    SLLT+LL  +
Sbjct: 2   LAKQTPLT--------KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENL 61

Query: 75  CAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFT 134
              G + YARQ+   +  P  FL+N+L K   +     +++L Y+ M  LGV    +T+ 
Sbjct: 62  VVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYP 121

Query: 135 SVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQR 194
            V+KA + L     G  +H+HVV  G+G    V   L+ +Y K G++  A+ +F+ M  +
Sbjct: 122 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 181

Query: 195 TTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLH 254
             +AWN+ ++   Q G    +++ FN M     Q DS TVVS+LS+C QLG+L+ G  ++
Sbjct: 182 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 241

Query: 255 DYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGE 314
           D A     D N+++  + ++M+ +CGN   AR +F+ MK RNVV+W+ MI GY M+G   
Sbjct: 242 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 301

Query: 315 QAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV--YGLVPGVEHHV 374
           +A+ LF  M+  G RPN +TF+ VLSAC+H+GL+++G+R FS M +     L P  EH+ 
Sbjct: 302 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 361

Query: 375 CMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEP 434
           CMVD+ GR+GLL++AY+FI+K +P EP   +W ++LGAC +H+   LG KVA+ ++   P
Sbjct: 362 CMVDLLGRSGLLEEAYEFIKK-MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 421

Query: 435 ENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHP 494
           +   ++V+LSNIYA AG+ D V+ VR+ M +   KK   YS++E   K + F+ GDKSHP
Sbjct: 422 DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 481

Query: 495 ETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQG 554
           ++ AIY  LDE++ +  + GY+P   S+ HD+E EE++ +L +HSEKLA+AFGL+K   G
Sbjct: 482 QSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPG 541

Query: 555 ETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
             IR++KNLR C+DCH+  K +S +   EII+RDK RFHHF++G C
Sbjct: 542 HPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVC 578

[Close]
BLAST of Carg07782 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 458.0 bits (1177), Expect = 1.6e-128
Identity = 225/554 (40.61%), Postives = 342/554 (61.73%), Query Frame = 0 

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKA 103
           LR   Q+H+    +G +    +LT  +SL    G I     L      PD   +N+++  
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296

Query: 104 TSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSD 163
            +  G +  ++  ++ ++  G    + T  S++     L  +     IH + + S + S 
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSH 356

Query: 164 MYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIG 223
             V  AL  +Y+K  +++ A+K+FDE P+++  +WN++ISGY QNGL   +I LF  M  
Sbjct: 357 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 416

Query: 224 SGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSK 283
           S F P+  T+  +LS+C+QLGAL  G W+HD   S  F+ ++ + T+LI MY +CG++++
Sbjct: 417 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 476

Query: 284 AREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAH 343
           AR +FD M  +N VTW  MISGYG+HG G++A+ +F EM   G  P  +TF+ VL AC+H
Sbjct: 477 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 536

Query: 344 SGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVW 403
           +GL+ +G   F+SM   YG  P V+H+ CMVD+ GRAG L+ A QFI + +  EPG +VW
Sbjct: 537 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI-EAMSIEPGSSVW 596

Query: 404 TSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRR 463
            ++LGACR+HK  +L   V+E +  ++P+N G++V+LSNI++      +   VR    +R
Sbjct: 597 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 656

Query: 464 RLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDL 523
           +L K  GY+ IEI +  ++F+ GD+SHP+   IY  L++L G+  E+GY P  E  +HD+
Sbjct: 657 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 716

Query: 524 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIV 583
           EEEER+  ++ HSE+LA+AFGL+ T  G  IRI+KNLR+C DCH+  K IS I +R I+V
Sbjct: 717 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 776

Query: 584 RDKFRFHHFKDGAC 598
           RD  RFHHFKDG C
Sbjct: 777 RDANRFHHFKDGVC 786

[Close]
BLAST of Carg07782 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 454.1 bits (1167), Expect = 2.3e-127
Identity = 229/561 (40.82%), Postives = 356/561 (63.46%), Query Frame = 0 

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTK----LLSLICAAGSITYARQLLPTVPNP-DSFLFN 103
           +  L+Q+HA  I  G   S + L K     L  + +   ++YA ++   +  P + F++N
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 104 SLLKATSKYGFSVDAVLFYRHMLFLG-VSQSNYTFTSVIKACADLSALRLGREIHSHVVV 163
           +L++  ++ G S+ A   YR M   G V    +T+  +IKA   ++ +RLG  IHS V+ 
Sbjct: 90  TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149

Query: 164 SGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDL 223
           SG+GS +YVQ +L+ LYA  GD+  A KVFD+MP++  +AWNS+I+G+ +NG P +++ L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209

Query: 224 FNLMIGSGFQPDSATVVSLLSSCSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTR 283
           +  M   G +PD  T+VSLLS+C+++GAL  G  +H Y        N+     L+++Y R
Sbjct: 210 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269

Query: 284 CGNVSKAREVFDSMKVRNVVTWTAMISGYGMHGYGEQAMKLFNEMRA-YGPRPNNITFVA 343
           CG V +A+ +FD M  +N V+WT++I G  ++G+G++A++LF  M +  G  P  ITFV 
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329

Query: 344 VLSACAHSGLIDDGRRAFSSMKEVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPE 403
           +L AC+H G++ +G   F  M+E Y + P +EH  CMVD+  RAG +K AY++I K +P 
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI-KSMPM 389

Query: 404 EPGPAVWTSMLGACRMHKIFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMV 463
           +P   +W ++LGAC +H   DL       +L +EP + G YV+LSN+YA   R   V+ +
Sbjct: 390 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 449

Query: 464 RNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPAL 523
           R  M+R  +KK  G+S +E+  + + F MGDKSHP+++AIY  L E+ GR    GY+P +
Sbjct: 450 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 509

Query: 524 ESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVI 583
            ++  D+EEEE++ A+ YHSEK+A+AF L+ T +   I +VKNLR+C DCH AIK +S +
Sbjct: 510 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 569

Query: 584 ADREIIVRDKFRFHHFKDGAC 598
            +REI+VRD+ RFHHFK+G+C
Sbjct: 570 YNREIVVRDRSRFHHFKNGSC 589

[Close]
BLAST of Carg07782 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 453.0 bits (1164), Expect = 5.1e-127
Identity = 234/599 (39.07%), Postives = 357/599 (59.60%), Query Frame = 0 

Query: 35  AALLQAGPRLRNLQQVHAHIIVSGF---HRSRSLLTKLLSLICAAGSITYARQLLPTVPN 94
           A L+     +  + Q+HA I+        R   L  KL     + G I ++  L     +
Sbjct: 33  AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92

Query: 95  PDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSNYTFTSVIKACADLSALRLGREI 154
           PD FLF + +   S  G    A L Y  +L   ++ + +TF+S++K+C+  S    G+ I
Sbjct: 93  PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 152

Query: 155 HSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDEMPQRT----------------- 214
           H+HV+  G G D YV   L+ +YAK GD+  AQKVFD MP+R+                 
Sbjct: 153 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 212

Query: 215 --------------TIAWNSLISGYEQNGLPGKSIDLFNLMIGSGF-QPDSATVVSLLSS 274
                          ++WN +I GY Q+G P  ++ LF  ++  G  +PD  TVV+ LS+
Sbjct: 213 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 272

Query: 275 CSQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTW 334
           CSQ+GAL+ G W+H +  S+   LNV + T LI+MY++CG++ +A  VF+    +++V W
Sbjct: 273 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 332

Query: 335 TAMISGYGMHGYGEQAMKLFNEMRAY-GPRPNNITFVAVLSACAHSGLIDDGRRAFSSMK 394
            AMI+GY MHGY + A++LFNEM+   G +P +ITF+  L ACAH+GL+++G R F SM 
Sbjct: 333 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 392

Query: 395 EVYGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKIFDL 454
           + YG+ P +EH+ C+V + GRAG LK AY+ I K +  +    +W+S+LG+C++H  F L
Sbjct: 393 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI-KNMNMDADSVLWSSVLGSCKLHGDFVL 452

Query: 455 GVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQ 514
           G ++AE+++ +  +N G YV+LSNIYA  G  + V  VRN+M  + + K+ G STIEI  
Sbjct: 453 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 512

Query: 515 KTYMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEK 574
           K + F  GD+ H ++  IY  L ++  R    GY+P   +++ DLEE E++ +L+ HSE+
Sbjct: 513 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 572

Query: 575 LALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGAC 598
           LA+A+GL+ T  G  ++I KNLR+C DCH+  K IS I  R+I++RD+ RFHHF DG+C
Sbjct: 573 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSC 626

The following BLAST results are available for this feature:
BLAST of Carg07782 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026573.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022926430.10.0e+0099.83pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Cucurbita mosc... [more]
KAG6594603.10.0e+0099.66Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023517887.10.0e+0098.66pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pep... [more]
XP_023003171.10.0e+0098.30pentatricopeptide repeat-containing protein At2g33760 [Cucurbita maxima][more]
BLAST of Carg07782 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P930112.5e-21160.95Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... [more]
Q9ZVF41.0e-13240.78Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... [more]
Q9SUH62.2e-12740.61Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
A8MQA33.2e-12640.82Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9SZT87.2e-12639.07Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
BLAST of Carg07782 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EL350.0e+0099.83pentatricopeptide repeat-containing protein At2g33760 isoform X1 OS=Cucurbita mo... [more]
A0A6J1KND50.0e+0098.30pentatricopeptide repeat-containing protein At2g33760 OS=Cucurbita maxima OX=366... [more]
A0A6J1EEW70.0e+0099.82pentatricopeptide repeat-containing protein At2g33760 isoform X2 OS=Cucurbita mo... [more]
A0A5D3CPN13.9e-30887.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DTH43.9e-30887.10pentatricopeptide repeat-containing protein At2g33760 OS=Cucumis melo OX=3656 GN... [more]
BLAST of Carg07782 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33760.11.8e-21260.95Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G01510.17.3e-13440.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G30700.11.6e-12840.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21065.12.3e-12740.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G37380.15.1e-12739.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 25..141
e-value: 2.1E-9
score: 39.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 142..246
e-value: 5.8E-21
score: 76.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 247..362
e-value: 1.2E-29
score: 105.8
coord: 363..513
e-value: 1.3E-6
score: 30.1
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10RNA polymerase Rpb2, domain 2coord: 640..786
e-value: 2.7E-27
score: 97.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 297..330
e-value: 1.2E-7
score: 29.5
coord: 197..230
e-value: 1.5E-6
score: 26.0
coord: 269..296
e-value: 3.6E-5
score: 21.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 194..240
e-value: 1.2E-7
score: 31.8
coord: 294..342
e-value: 2.1E-13
score: 50.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 169..192
e-value: 0.0043
score: 17.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 11.060009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 12.265752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..294
score: 8.692369
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 470..593
e-value: 1.1E-39
score: 135.2
IPR007642RNA polymerase Rpb2, domain 2PFAMPF04561RNA_pol_Rpb2_2coord: 686..772
e-value: 2.8E-15
score: 56.4
IPR007644RNA polymerase, beta subunit, protrusionPFAMPF04563RNA_pol_Rpb2_1coord: 605..685
e-value: 2.7E-10
score: 40.8
NoneNo IPR availablePANTHERPTHR47924:SF35SUBFAMILY NOT NAMEDcoord: 27..597
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 27..597
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 605..783

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07782-RACarg07782-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding