Carg07733 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07733
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr13: 8679149 .. 8679588 (+)
RNA-Seq ExpressionCarg07733
SyntenyCarg07733
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAAACCTCTGCTCGAATTTCAGCGTTATCCTCAACTCTTCGTCTTCTTCATCTCTCGATCCGACCTTTTAGCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACCATTTCGGAAATCCACGACTCTACTGAACGAGAGATTCGCCGGTGGTTTGATTGCTAATTAAGAGTATGTTTTCATCTTCTTCTCTCTCTTTTCCTTTCCTTTTATCTTCATTGCTCGTTCTCTGTAATCGATTCTTCCACTGTGCCGCTGAATTTGCTTTTCCTTTTTTATTTCTCTCAATTTTCAATTCCTTCTGTTCTTTCCTTTTTCACCAGCCGGATTTTCCGATCAGGTGCCTCATTCTTCTTTATATTCAACCAATTCGTCAATCATCCACCACCGGAAACGCACATTCCTCTGAACGAAACGAAGACCTAG

mRNA sequence

TCAAAACCTCTGCTCGAATTTCAGCGTTATCCTCAACTCTTCGTCTTCTTCATCTCTCGATCCGACCTTTTAGCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACCATTTCGGAAATCCACGACTCTACTGAACGAGAGATTCGCCGGTGGTGCCTCATTCTTCTTTATATTCAACCAATTCGTCAATCATCCACCACCGGAAACGCACATTCCTCTGAACGAAACGAAGACCTAG

Coding sequence (CDS)

TCAAAACCTCTGCTCGAATTTCAGCGTTATCCTCAACTCTTCGTCTTCTTCATCTCTCGATCCGACCTTTTAGCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACCATTTCGGAAATCCACGACTCTACTGAACGAGAGATTCGCCGGTGGTGCCTCATTCTTCTTTATATTCAACCAATTCGTCAATCATCCACCACCGGAAACGCACATTCCTCTGAACGAAACGAAGACCTAG

Protein sequence

SKPLLEFQRYPQLFVFFISRSDLLAFLLLLLLLLLLLLLPPFRKSTTLLNERFAGGASFFFIFNQFVNHPPPETHIPLNETKT
Homology
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BLAST of Carg07733 vs. NCBI nr
Match: KAG7019871.1 (hypothetical protein SDJN02_18836, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  SKPLLEFQRYPQLFVFFISRSDLLAFLLLLLLLLLLLLLPPFRKSTTLLNERFAGGASFF 60
          SKPLLEFQRYPQLFVFFISRSDLLAFLLLLLLLLLLLLLPPFRKSTTLLNERFAGGASFF
Sbjct: 1  SKPLLEFQRYPQLFVFFISRSDLLAFLLLLLLLLLLLLLPPFRKSTTLLNERFAGGASFF 60

Query: 61 FIFNQFVNHPPPETHIPLNETKT 84
          FIFNQFVNHPPPETHIPLNETKT
Sbjct: 61 FIFNQFVNHPPPETHIPLNETKT 83

The following BLAST results are available for this feature:
BLAST of Carg07733 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019871.12.9e-35100.00hypothetical protein SDJN02_18836, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg07733 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07733 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07733 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07733-RACarg07733-RAmRNA