Carg07621 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07621
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH137-like
Location	Carg_Chr13: 8172861 .. 8173516 (-)
RNA-Seq Expression	Carg07621
Synteny	Carg07621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATCAACTTTGAAGAGAGAGAGAGAGAGAGAGAAAAATGGCAGCCTTTTCATATCAATACCAACCGGTTCTTCTCGACTCCATGTTCTTCCCCAACAATTCCTACAAAATGGGAGGCTTTTTGGATGACCCAAATTTCAACACCAATTGCTTCTCTCAATTTCAAGAACAACAACAACAACAACCCATTTACCATTTCCCCGACATCTCCAACCAAACCCCTGAATCTTCCACTTTGGTCGACAGATCCGACAGCGCCGACCCGCCGGCTGTCACTGTCACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGCCGGAATACTTCCTCCGCCACCTCCGCCCAATCCAAGGTCCACAAAAGCTTCAATCTTTATGGTTTTTGGTTCCTTTTAATCCCTTTTTTGAGTGATTTTTAATTAATCCTTTTGGGGTTTTTCAGGGCACTACAGAGATCACCGCAAAGAAGCAGAAAAGTAAAGTGGAATTAGATGAACATAAAGAAGGAGATCCAAAGCCCAAAAATGGGAAGAAAGAGGAGAAAAAAGTCTCAGACGGTGCAGCAACTAAAGACTACATTCACGTCAGAGCTCGAAGGGGCCAAGCCACTGACAGCCACAGTCTCGCTGAGAGGGTAAATAATTATCCACTTTGA

mRNA sequence

ATTGATCAACTTTGAAGAGAGAGAGAGAGAGAGAGAAAAATGGCAGCCTTTTCATATCAATACCAACCGGTTCTTCTCGACTCCATGTTCTTCCCCAACAATTCCTACAAAATGGGAGGCTTTTTGGATGACCCAAATTTCAACACCAATTGCTTCTCTCAATTTCAAGAACAACAACAACAACAACCCATTTACCATTTCCCCGACATCTCCAACCAAACCCCTGAATCTTCCACTTTGGTCGACAGATCCGACAGCGCCGACCCGCCGGCTGTCACTGTCACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGCCGGAATACTTCCTCCGCCACCTCCGCCCAATCCAAGGGCACTACAGAGATCACCGCAAAGAAGCAGAAAAGTAAAGTGGAATTAGATGAACATAAAGAAGGAGATCCAAAGCCCAAAAATGGGAAGAAAGAGGAGAAAAAAGTCTCAGACGGTGCAGCAACTAAAGACTACATTCACGTCAGAGCTCGAAGGGGCCAAGCCACTGACAGCCACAGTCTCGCTGAGAGGGTAAATAATTATCCACTTTGA

Coding sequence (CDS)

ATGGCAGCCTTTTCATATCAATACCAACCGGTTCTTCTCGACTCCATGTTCTTCCCCAACAATTCCTACAAAATGGGAGGCTTTTTGGATGACCCAAATTTCAACACCAATTGCTTCTCTCAATTTCAAGAACAACAACAACAACAACCCATTTACCATTTCCCCGACATCTCCAACCAAACCCCTGAATCTTCCACTTTGGTCGACAGATCCGACAGCGCCGACCCGCCGGCTGTCACTGTCACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGCCGGAATACTTCCTCCGCCACCTCCGCCCAATCCAAGGGCACTACAGAGATCACCGCAAAGAAGCAGAAAAGTAAAGTGGAATTAGATGAACATAAAGAAGGAGATCCAAAGCCCAAAAATGGGAAGAAAGAGGAGAAAAAAGTCTCAGACGGTGCAGCAACTAAAGACTACATTCACGTCAGAGCTCGAAGGGGCCAAGCCACTGACAGCCACAGTCTCGCTGAGAGGGTAAATAATTATCCACTTTGA

Protein sequence

MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERVNNYPL

Homology

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BLAST of Carg07621 vs. NCBI nr
Match: KAG7019761.1 (Transcription factor BPE [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.0 bits (863), Expect = 9.5e-89
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ 60
           MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ 60

Query: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE 120
           TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE
Sbjct: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE 120

Query: 121 LDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERVNNYPL 176
           LDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERVNNYPL
Sbjct: 121 LDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERVNNYPL 175

[Close]

BLAST of Carg07621 vs. NCBI nr
Match: XP_022924083.1 (transcription factor bHLH137-like [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-80
Identity = 165/171 (96.49%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE-QQQQQPIYHFPDISN 60
           MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCF QFQE QQQQQPIYHFPDISN
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFLQFQEQQQQQQPIYHFPDISN 60

Query: 61  QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKV 120
           QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTE T KKQKSK 
Sbjct: 61  QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTESTGKKQKSKG 120

Query: 121 ELDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
           ELDEHKEGDPKPKNGKKEEKKVSDGAATK YIHVRARRGQATDSHSLAERV
Sbjct: 121 ELDEHKEGDPKPKNGKKEEKKVSDGAATKGYIHVRARRGQATDSHSLAERV 171

[Close]

BLAST of Carg07621 vs. NCBI nr
Match: XP_023000938.1 (transcription factor bHLH137-like [Cucurbita maxima])

HSP 1 Score: 304.7 bits (779), Expect = 5.2e-79
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ 60
           MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE +QQQPIYHFPDISNQ
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE-EQQQPIYHFPDISNQ 60

Query: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE 120
           TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSA SKGTTE TAKKQKSKVE
Sbjct: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAHSKGTTETTAKKQKSKVE 120

Query: 121 LDEHKEGDPKPKNGKKEEKKVS--DGAATKDYIHVRARRGQATDSHSLAERV 171
           LDEHKEGDPKPKNGKKEEKK S  DGAATK YIHVRARRGQATDSHSLAERV
Sbjct: 121 LDEHKEGDPKPKNGKKEEKKASEEDGAATKGYIHVRARRGQATDSHSLAERV 171

[Close]

BLAST of Carg07621 vs. NCBI nr
Match: KAG6584170.1 (Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.6 bits (745), Expect = 4.6e-75
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 16  MFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSAD 75
           MFFPNNSYKMGGFLDDPNFNTNCF QFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSAD
Sbjct: 1   MFFPNNSYKMGGFLDDPNFNTNCFLQFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSAD 60

Query: 76  PPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKPKNGK 135
           PPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTE TAKKQKSKVELDEHKEGDPKPKNGK
Sbjct: 61  PPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTETTAKKQKSKVELDEHKEGDPKPKNGK 120

Query: 136 KEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
           KEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV
Sbjct: 121 KEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 155

[Close]

BLAST of Carg07621 vs. NCBI nr
Match: XP_023520046.1 (transcription factor bHLH137-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 9.2e-68
Identity = 148/170 (87.06%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ 60
           MAAFSYQYQP+LLDSMFFPNN +KMGGFLDDPNFNT       ++QQQQPIYHF DISNQ
Sbjct: 1   MAAFSYQYQPILLDSMFFPNNPFKMGGFLDDPNFNT------IQEQQQQPIYHFADISNQ 60

Query: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE 120
           TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSK   E T KKQKSK E
Sbjct: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSK---ESTGKKQKSKGE 120

Query: 121 LDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
           LDEHKE DPKPKNGKKEEK VSDGAATK YIHVRARRGQATDSHSLAERV
Sbjct: 121 LDEHKEEDPKPKNGKKEEKNVSDGAATKGYIHVRARRGQATDSHSLAERV 161

[Close]

BLAST of Carg07621 vs. ExPASy Swiss-Prot
Match: Q0JXE7 (Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.0e-05
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 90  KRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKPKN-GKKEEKKVSDGAATK 149
           KR+   + SA    + G +E   K+QK    +DE  +G  + ++ G + E+K      TK
Sbjct: 76  KRREDESKSAKIVSTIGASEGENKRQK----IDEVCDGKAEAESLGTETEQKKQQMEPTK 135

Query: 150 DYIHVRARRGQATDSHSLAER 170
           DYIHVRARRGQATDSHSLAER
Sbjct: 136 DYIHVRARRGQATDSHSLAER 152

[Close]

BLAST of Carg07621 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 53/142 (37.32%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 33  NFNTNCFSQFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSADPPAVTVTV---TSPCSK 92
           +FN+   S F       PI + P I+  T E    V  S    P A  V     +   S+
Sbjct: 155 SFNSRTNSPF-------PINNEPPIT--TNEKMPRVSSSPVFKPLASHVPAGESSGELSR 214

Query: 93  KRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKP-KNGKKEEKKVSDGAATK 152
           KRK+++  ++ SA S            S  E++E ++ DPK  K  ++   K       K
Sbjct: 215 KRKTKSKQNSPSAVS------------SSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYK 274

Query: 153 DYIHVRARRGQATDSHSLAERV 171
           DYIHVRARRGQATDSHSLAERV
Sbjct: 275 DYIHVRARRGQATDSHSLAERV 275

[Close]

BLAST of Carg07621 vs. ExPASy Swiss-Prot
Match: Q93W88 (Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 59/178 (33.15%), Postives = 79/178 (44.38%), Query Frame = 0


Query: 1   MAAFSY--QYQPVLLDSMFF--PNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPD 60
           MA FSY   Y   LLD + F  P++S  +  F+D                 Q  +Y  P+
Sbjct: 1   MATFSYFQNYPHSLLDPLLFPTPHSSINLTSFID-----------------QNHLYPLPN 60

Query: 61  ISNQTPES--STLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKK 120
           IS     S     VD+++++    +  T  +  +        S   SA +  T +   +K
Sbjct: 61  ISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAIT-NTGKTRGRK 120

Query: 121 QKSKVELDEHKEG--DPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
            ++     E  EG    K K G KEE          DYIHVRARRGQATDSHSLAERV
Sbjct: 121 ARNSNNSKEGVEGRKSKKQKRGSKEEPPT-------DYIHVRARRGQATDSHSLAERV 153

[Close]

BLAST of Carg07621 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.5e-04
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 82  TVTSPCSKKRK------------SRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDP 141
           T T  C++K+K                 S  + Q+ G+T+ + KK K K + +E+     
Sbjct: 98  TETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTK-SIKKMKHKAKKEEN----- 157

Query: 142 KPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
              N   +  KV+      DYIHVRARRGQATDSHS+AERV
Sbjct: 158 ---NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERV 189

[Close]

BLAST of Carg07621 vs. ExPASy Swiss-Prot
Match: Q9LK48 (Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.5e-04
Identity = 43/115 (37.39%), Postives = 56/115 (48.70%), Query Frame = 0


Query: 69  DRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGD 128
           ++S   DP +V+  V +  S  RK ++  S    +S  ++ +TA   K   E    K G 
Sbjct: 93  NKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGK 152

Query: 129 -------PKPKNGKKEEKKVSDG-------AATKDYIHVRARRGQATDSHSLAER 170
                     KNG ++     D         A KDYIHVRARRGQATDSHSLAER
Sbjct: 153 RSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAER 207

[Close]

BLAST of Carg07621 vs. ExPASy TrEMBL
Match: A0A6J1EBD0 (transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111431622 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 165/171 (96.49%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE-QQQQQPIYHFPDISN 60
           MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCF QFQE QQQQQPIYHFPDISN
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFLQFQEQQQQQQPIYHFPDISN 60

Query: 61  QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKV 120
           QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTE T KKQKSK 
Sbjct: 61  QTPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTESTGKKQKSKG 120

Query: 121 ELDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
           ELDEHKEGDPKPKNGKKEEKKVSDGAATK YIHVRARRGQATDSHSLAERV
Sbjct: 121 ELDEHKEGDPKPKNGKKEEKKVSDGAATKGYIHVRARRGQATDSHSLAERV 171

[Close]

BLAST of Carg07621 vs. ExPASy TrEMBL
Match: A0A6J1KP29 (transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111495225 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPDISNQ 60
           MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE +QQQPIYHFPDISNQ
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQE-EQQQPIYHFPDISNQ 60

Query: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKKQKSKVE 120
           TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSA SKGTTE TAKKQKSKVE
Sbjct: 61  TPESSTLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAHSKGTTETTAKKQKSKVE 120

Query: 121 LDEHKEGDPKPKNGKKEEKKVS--DGAATKDYIHVRARRGQATDSHSLAERV 171
           LDEHKEGDPKPKNGKKEEKK S  DGAATK YIHVRARRGQATDSHSLAERV
Sbjct: 121 LDEHKEGDPKPKNGKKEEKKASEEDGAATKGYIHVRARRGQATDSHSLAERV 171

[Close]

BLAST of Carg07621 vs. ExPASy TrEMBL
Match: A0A1S3B0V0 (transcription factor bHLH137 OS=Cucumis melo OX=3656 GN=LOC103484648 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.5e-52
Identity = 134/193 (69.43%), Postives = 144/193 (74.61%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQF---------QEQQQQQPI 60
           MAAFSYQYQP LLDS+F  NN  K+GGF D+ NFNTNCFSQF         Q+QQQQQPI
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNNPLKVGGFFDEQNFNTNCFSQFYPQDQPQQQQQQQQQQPI 60

Query: 61  YHFPDISNQTPESSTLVDRSD-SAD-------PPAVTVTVTSPCSKKRKSRNTSSATSAQ 120
           YHFPD+S Q+PESS LVDRSD SA+        PAVTVTVTSPCSKKRKSRN SSA+SAQ
Sbjct: 61  YHFPDLSKQSPESSALVDRSDVSAELPVGHRLKPAVTVTVTSPCSKKRKSRNNSSASSAQ 120

Query: 121 SKGTT--EITAKKQKSKVELDEHKEGDPKPKNGKK--EE--KKVSDGAATKDYIHVRARR 171
           SKGTT  +   KK K+K ELDE KE D K KNGKK  EE  K   DG AT  YIHVRARR
Sbjct: 121 SKGTTDHQSNGKKPKNKGELDEGKEKDQKAKNGKKLLEEKIKDSEDGGATTGYIHVRARR 180

[Close]

BLAST of Carg07621 vs. ExPASy TrEMBL
Match: A0A6J1C798 (transcription factor bHLH137 OS=Momordica charantia OX=3673 GN=LOC111008894 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51
Identity = 125/175 (71.43%), Postives = 138/175 (78.86%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHF-PDISN 60
           MAAFSYQYQP LLDS+F P N  KM  FLDDPNFN NCFSQF    Q+ PI+HF PD+S 
Sbjct: 1   MAAFSYQYQPFLLDSVFMPTNPLKMAAFLDDPNFNANCFSQF--FPQEPPIHHFSPDLSK 60

Query: 61  QTPESSTLVDRSDSADPP---AVTVTVTSPCSKKRKSR-NTSSATSAQSKGTTEITAKKQ 120
           Q+PESSTLV++SDSA+PP   AVTVTVTSPCSKKRKSR N SSA+S QSKG TE T KKQ
Sbjct: 61  QSPESSTLVEKSDSAEPPQLKAVTVTVTSPCSKKRKSRNNNSSASSTQSKGATESTGKKQ 120

Query: 121 KSKVELDEHKEGDPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
           K     DE KEGD KPK GKKE+KK+S+    + YIHVRARRGQATDSHSLAERV
Sbjct: 121 KMAKGEDERKEGDQKPKTGKKEDKKISE----EGYIHVRARRGQATDSHSLAERV 169

[Close]

BLAST of Carg07621 vs. ExPASy TrEMBL
Match: A0A0A0LUH5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051740 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.1e-49
Identity = 129/197 (65.48%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 1   MAAFSYQYQPVLLDSMFFPNNS-YKMGGFLDDPNFNTNCFSQF--------------QEQ 60
           MAAFSYQYQP LLDS+F  NN+  KMGGF D+ NFNTNCFS F              Q+Q
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60

Query: 61  QQQQPIYHFPDISNQTPESSTLVDRSDSAD-------PPAVTVTVTSPCSKKRKSRNTSS 120
           QQ+QPIYHFPD+S Q+PESSTLVDRSDSA+        PAVTVTVTSPCSKKRKSRN SS
Sbjct: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120

Query: 121 ATSAQSKGTT-EITAKKQKSKVELDEHKEGDPKPKNGKK--EE--KKVSDGAATKDYIHV 171
           A+SAQSKG+  +   KK K+K E++E KE D K K+GKK  EE  K   DG AT  YIHV
Sbjct: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180

[Close]

BLAST of Carg07621 vs. TAIR 10
Match: AT1G59640.1 (BIG PETAL P )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 90  KRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKPKN-GKKEEKKVSDGAATK 149
           KR+   + SA    + G +E   K+QK    +DE  +G  + ++ G + E+K      TK
Sbjct: 76  KRREDESKSAKIVSTIGASEGENKRQK----IDEVCDGKAEAESLGTETEQKKQQMEPTK 135

Query: 150 DYIHVRARRGQATDSHSLAER 170
           DYIHVRARRGQATDSHSLAER
Sbjct: 136 DYIHVRARRGQATDSHSLAER 152

[Close]

BLAST of Carg07621 vs. TAIR 10
Match: AT1G59640.2 (BIG PETAL P )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 90  KRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKPKN-GKKEEKKVSDGAATK 149
           KR+   + SA    + G +E   K+QK    +DE  +G  + ++ G + E+K      TK
Sbjct: 76  KRREDESKSAKIVSTIGASEGENKRQK----IDEVCDGKAEAESLGTETEQKKQQMEPTK 135

Query: 150 DYIHVRARRGQATDSHSLAER 170
           DYIHVRARRGQATDSHSLAER
Sbjct: 136 DYIHVRARRGQATDSHSLAER 152

[Close]

BLAST of Carg07621 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 8.2e-06
Identity = 53/142 (37.32%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 33  NFNTNCFSQFQEQQQQQPIYHFPDISNQTPESSTLVDRSDSADPPAVTVTV---TSPCSK 92
           +FN+   S F       PI + P I+  T E    V  S    P A  V     +   S+
Sbjct: 155 SFNSRTNSPF-------PINNEPPIT--TNEKMPRVSSSPVFKPLASHVPAGESSGELSR 214

Query: 93  KRKSRNTSSATSAQSKGTTEITAKKQKSKVELDEHKEGDPKP-KNGKKEEKKVSDGAATK 152
           KRK+++  ++ SA S            S  E++E ++ DPK  K  ++   K       K
Sbjct: 215 KRKTKSKQNSPSAVS------------SSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYK 274

Query: 153 DYIHVRARRGQATDSHSLAERV 171
           DYIHVRARRGQATDSHSLAERV
Sbjct: 275 DYIHVRARRGQATDSHSLAERV 275

[Close]

BLAST of Carg07621 vs. TAIR 10
Match: AT5G50915.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 59/178 (33.15%), Postives = 79/178 (44.38%), Query Frame = 0


Query: 1   MAAFSY--QYQPVLLDSMFF--PNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPD 60
           MA FSY   Y   LLD + F  P++S  +  F+D                 Q  +Y  P+
Sbjct: 1   MATFSYFQNYPHSLLDPLLFPTPHSSINLTSFID-----------------QNHLYPLPN 60

Query: 61  ISNQTPES--STLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKK 120
           IS     S     VD+++++    +  T  +  +        S   SA +  T +   +K
Sbjct: 61  ISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAIT-NTGKTRGRK 120

Query: 121 QKSKVELDEHKEG--DPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
            ++     E  EG    K K G KEE          DYIHVRARRGQATDSHSLAERV
Sbjct: 121 ARNSNNSKEGVEGRKSKKQKRGSKEEPPT-------DYIHVRARRGQATDSHSLAERV 153

[Close]

BLAST of Carg07621 vs. TAIR 10
Match: AT5G50915.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 59/178 (33.15%), Postives = 79/178 (44.38%), Query Frame = 0


Query: 1   MAAFSY--QYQPVLLDSMFF--PNNSYKMGGFLDDPNFNTNCFSQFQEQQQQQPIYHFPD 60
           MA FSY   Y   LLD + F  P++S  +  F+D                 Q  +Y  P+
Sbjct: 1   MATFSYFQNYPHSLLDPLLFPTPHSSINLTSFID-----------------QNHLYPLPN 60

Query: 61  ISNQTPES--STLVDRSDSADPPAVTVTVTSPCSKKRKSRNTSSATSAQSKGTTEITAKK 120
           IS     S     VD+++++    +  T  +  +        S   SA +  T +   +K
Sbjct: 61  ISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAIT-NTGKTRGRK 120

Query: 121 QKSKVELDEHKEG--DPKPKNGKKEEKKVSDGAATKDYIHVRARRGQATDSHSLAERV 171
            ++     E  EG    K K G KEE          DYIHVRARRGQATDSHSLAERV
Sbjct: 121 ARNSNNSKEGVEGRKSKKQKRGSKEEPPT-------DYIHVRARRGQATDSHSLAERV 153

The following BLAST results are available for this feature:

BLAST of Carg07621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019761.1	9.5e-89	100.00	Transcription factor BPE [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022924083.1	2.8e-80	96.49	transcription factor bHLH137-like [Cucurbita moschata]	[more]
XP_023000938.1	5.2e-79	95.35	transcription factor bHLH137-like [Cucurbita maxima]	[more]
KAG6584170.1	4.6e-75	98.71	Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma...	[more]
XP_023520046.1	9.2e-68	87.06	transcription factor bHLH137-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JXE7	3.0e-05	46.91	Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1	[more]
Q9SRT2	1.2e-04	37.32	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q93W88	3.4e-04	33.15	Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=...	[more]
Q8GY61	7.5e-04	37.62	Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1	[more]
Q9LK48	7.5e-04	37.39	Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1	[more]

BLAST of Carg07621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBD0	1.3e-80	96.49	transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111431622 ...	[more]
A0A6J1KP29	2.5e-79	95.35	transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111495225 PE...	[more]
A0A1S3B0V0	4.5e-52	69.43	transcription factor bHLH137 OS=Cucumis melo OX=3656 GN=LOC103484648 PE=4 SV=1	[more]
A0A6J1C798	3.8e-51	71.43	transcription factor bHLH137 OS=Momordica charantia OX=3673 GN=LOC111008894 PE=4...	[more]
A0A0A0LUH5	2.1e-49	65.48	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051740 PE=4 S...	[more]

BLAST of Carg07621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59640.1	2.2e-06	46.91	BIG PETAL P	[more]
AT1G59640.2	2.2e-06	46.91	BIG PETAL P	[more]
AT3G07340.1	8.2e-06	37.32	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.1	2.4e-05	33.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.2	2.4e-05	33.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..163
None	No IPR available	PANTHER	PTHR12565:SF359	BASIC HELIX LOOP HELIX PROTEIN BHLH8	coord: 1..171
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07621-RA	Carg07621-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity