Carg07607 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07607
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein transport protein Sec61 subunit gamma
Location	Carg_Chr13: 8094860 .. 8097872 (-)
RNA-Seq Expression	Carg07607
Synteny	Carg07607

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGGTATGTTTCTTTCTTTGACATTATATTGCATAGATCTGATTCAATCGAAGTCACAGATTCCGTTTTCCGTTTCAATTTGACTTATTCAACATTTTGGTGGTGCAGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAGATTAGGTATGCATCCAATCTAATAGATCTTCTAATTTTCTCTTCGATCTGGCTTGTTTGTGTTCTGCATCGTGCTCATCTTATTGAAGATTTTTGCAATTACGGAACGGATCGATAATTCCTTAAATTTTCGTTCGATGCACGTCCATGCAATGCCTACCGAATAGCATGATATTGTATATTCAGGCACGATCGATCCAAACGATTGAAGATCGTACGACTAGCATCCATGCTTTTTATAACGCTCCTCATATTCAAGACGTTCTTGCTGTGGATTTGCGTTTATTTTCTTCCAATATGTCTTCGTTTATGGTTGAGAAGGAGAATCGTTAGGAAACATTATTGAAGCAGCTCTCTGTTAGTTAGTTCCTACGCTGCTATCCTTGTAGGTGTGAACTTTTCTGAGTGCCAATCTTCTGATGTTGTGGTTTTAATATTAGTCTAGTTTGTAGTTCACTTCTCTTCTCTGTATGTTAAACTATAAATTTTGTATTTTTCTTAATGCCCTAGGGAGTTCACTTCTTGTCTTCATCCTCTTTGAAACTTTAAGAACATCTTAATGGCAATATTGTTTATCATGCTTCTCGGAGAAACTTTGAAAGGAATTATTTTAGATATCTATATAATGAACCGGTTGTGGATTGTTAGCATTTCCTCTGCTCGCCTATATCTTAGTGTGCATGCGTTTCAAATCTTAGTCACCTGAGAAACAATCGTTGATTAGAGATGAGAGCAGGGCAGATCCCAGATGGAAGTAGATTCCCCACTTAGTTTACTGTAAACTGAAAAGGTATATATAAAGTACTTAAGTTCTGTAGTTTTCCTCTAATTTGAGTGATGGAAAGTGATGGAGGCTTGAAGTGTGAAGATATTAAAACAGAGGTGTAACTGTTAAAGGAATGTTCAGTTTGCTAACAAACATCGAAACCAAAAGGTTCAAAGTGAGAAACTCTGGAAGCAGAGTGCAGGAATCGGACCCCTGTATTTGGAATTTACAGGGACTGAAGTATGTAGTGGTAGTTATGTGTGAATAACATTAATATTTGTATAACATGCATTTGAATGCCCATCAGGCAACCAAAGAAAGAAAGCATTAGAAAGAGAATTTAGAGAATAAACAATTAGGAGTTGGATGCTGTATTTTGGAATGGCACAGCACTACAATTGTGAAACCTGACCCTACATATTCATGCTTGCCGACCAAATGCTCCTTCAGAATATATAGTTTTTTTTTTGTGTTAAATCCAGTAGGTGAGAGTTCCTTGTGTTAAATTAAATCTATCTTTATGCTTTCCTTGAAATGTTTCTTTGTAGTCCATAGTTTACATCTTTAACGCATTATTTTGGGACCATCTTTTCCACTTAATGTGGCTGATTGATATTCCTCGCATTAGATCTGCCTGTTTCCTTCCTTCAGATTCATGTATTTATGTTCATGAAAGTGGTTATTGGTTTTATTATAAAATAAATGTAATTTCAGTTCAGTGATTAGATCCATGGAAATCAATTTAATGCGTTCTTCTCGATGCTCGATAGGGCGAATGTGTACCCTGTGTTCAATACCCCAACACCCCCATCATTTATTTTCTCTTCCAGCCACTGCACCCTCAATCGTGTTAAATACTGTCAGGCTACGACACTGTTAATTAGACACTAATTCTGTTTTGCCAATGAATTTTCAGGTCATGATGAAGTTCGTAAATGATGGGGGCTGGTGTTTACAGTTAGTTCGGCCTGTGTTCACTGAGGAATACTTAACATTTAGCTATCTTGTAGAACTTTTAAATCGTAAATTGATTAAACCCCAGGATATATGGAAAATTTTCTTATCATATTAATGAACTCACTCTCTTTTTATATTTGAATGCTATAAACCTGTTTTTATGGTTAAATATTCGTACCGAAATTTATTTTTCCAGAAGTGAGCATATAGCCGCCGTTCTGGTGGGGGCAAGAATATTCATGTTTATCGCATACTGTTAAATGTGAATATCCATTAGGAGGAAGGTCGATCGAGGAATTATGGAAATTCTTCAAGATGGAGATCTCTAGATGGATTTTACTTTTTCTAAACATGGAAAATTAACTTTCTTGGATTGCTTGTTTTCAGAATACCTACTTTATTATGGTGTTTCTTTCCCCTTGTTTTCTTTAGGATTATAAAATTTGTTATAACAATGTGCTCAAATAATTTTTTAAAAAGTGCTTAAACTATATATAATGTATTTTGGGGTCAGCCTAATAGCATGAACAATTCACGCAGTCCCGTTATGTTCACAAGTAGTCCATAAGAACAAACCTAAACGTGTACTTTTCTGCCAATTACAGGAGGTAAAGACACCAATTAACACTTAGTTTTCTACCATGAAAAATGCCCACAAATGCTATTTCTCTATTGCATACTTGAAGTTTGAAAATGAGAGGTGATCATTTGAAACATCGTGGTTCAGTTGATTTTTTTCAAATGGGTAACAGTAGGGGAATAGTGACTGATGAACCATTCATTGGCTGATTCAGCAAAATGAAGAACAGTTTCCAGCCTTCCACGGGTCTGATCTGAAGTCGTCATTCTTTTGGTAGTCATTTTGAAGAATGAACGAAAGGGGGTATTTCCACCTTTAAAAAGGAGGAGAGCACAGAGGAGAACGTCGAAGTTCGAGAAGGTCAAAATGGATGGAAATGACCCAGCAACCATTTGA

mRNA sequence

ATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGTCATTTTGAAGAATGAACGAAAGGGGGTATTTCCACCTTTAAAAAGGAGGAGAGCACAGAGGAGAACGTCGAAGTTCGAGAAGGTCAAAATGGATGGAAATGACCCAGCAACCATTTGA

Coding sequence (CDS)

ATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGTCATTTTGAAGAATGAACGAAAGGGGGTATTTCCACCTTTAAAAAGGAGGAGAGCACAGAGGAGAACGTCGAAGTTCGAGAAGGTCAAAATGGATGGAAATGACCCAGCAACCATTTGA

Protein sequence

MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSVILKNERKGVFPPLKRRRAQRRTSKFEKVKMDGNDPATI

Homology

[Close]

BLAST of Carg07607 vs. NCBI nr
Match: KAG7019747.1 (Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61  INNIIVGSVILKNERKGVFPPLKRRRAQRRTSKFEKVKMDGNDPATI 108
           INNIIVGSVILKNERKGVFPPLKRRRAQRRTSKFEKVKMDGNDPATI
Sbjct: 61  INNIIVGSVILKNERKGVFPPLKRRRAQRRTSKFEKVKMDGNDPATI 107

[Close]

BLAST of Carg07607 vs. NCBI nr
Match: PRQ18687.1 (putative protein translocase complex, SecE/Sec61-gamma subunit, protein translocase SecE [Rosa chinensis])

HSP 1 Score: 133.7 bits (335), Expect = 9.7e-28
Identity = 66/72 (91.67%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKEF+KVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLREFSKDSIRLVKRCHKPDRKEFSKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSVILK 73
          INNIIVGSV+LK
Sbjct: 61 INNIIVGSVMLK 72

[Close]

BLAST of Carg07607 vs. NCBI nr
Match: XP_022137357.1 (uncharacterized protein LOC111008832 isoform X1 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 227 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 286

Query: 61  INNIIVGS 69
           INNIIVGS
Sbjct: 287 INNIIVGS 294

[Close]

BLAST of Carg07607 vs. NCBI nr
Match: XP_008439824.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_011652190.1 protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_022924215.1 protein transport protein Sec61 subunit gamma isoform X1 [Cucurbita moschata] >XP_022955226.1 protein transport protein Sec61 subunit gamma [Cucurbita moschata] >XP_022994502.1 protein transport protein Sec61 subunit gamma [Cucurbita maxima] >XP_023000906.1 protein transport protein Sec61 subunit gamma isoform X2 [Cucurbita maxima] >XP_023519526.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo] >XP_023542809.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo] >XP_038893830.1 protein transport protein Sec61 subunit gamma [Benincasa hispida] >KAA0055337.1 protein transport protein Sec61 subunit gamma [Cucumis melo var. makuwa] >KAG7012319.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >KAE8652628.1 hypothetical protein Csa_013813 [Cucumis sativus] >TYJ99263.1 protein transport protein Sec61 subunit gamma [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. NCBI nr
Match: XP_022137358.1 (uncharacterized protein LOC111008832 isoform X2 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 224 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 283

Query: 61  INNIIVGS 69
           INNIIVGS
Sbjct: 284 INNIIVGS 291

[Close]

BLAST of Carg07607 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.9e-30
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-29
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Carg07607 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-29
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Carg07607 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-27
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.3e-22
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy TrEMBL
Match: A0A2P6P9U4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0208811 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.7e-28
Identity = 66/72 (91.67%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKEF+KVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLREFSKDSIRLVKRCHKPDRKEFSKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSVILK 73
          INNIIVGSV+LK
Sbjct: 61 INNIIVGSVMLK 72

[Close]

BLAST of Carg07607 vs. ExPASy TrEMBL
Match: A0A6J1JW08 (protein transport protein Sec61 subunit gamma OS=Cucurbita maxima OX=3661 GN=LOC111490205 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy TrEMBL
Match: A0A6J1GT74 (protein transport protein Sec61 subunit gamma OS=Cucurbita moschata OX=3662 GN=LOC111457253 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy TrEMBL
Match: A0A5D3BJ11 (Protein transport protein Sec61 subunit gamma OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004750 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Carg07607 vs. ExPASy TrEMBL
Match: A0A6J1CA50 (uncharacterized protein LOC111008832 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 224 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 283

Query: 61  INNIIVGS 69
           INNIIVGS
Sbjct: 284 INNIIVGS 291

[Close]

BLAST of Carg07607 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-30
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Carg07607 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-30
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Carg07607 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 124.0 bits (310), Expect = 7.2e-29
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

The following BLAST results are available for this feature:

BLAST of Carg07607 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019747.1	2.4e-50	100.00	Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma s...	[more]
PRQ18687.1	9.7e-28	91.67	putative protein translocase complex, SecE/Sec61-gamma subunit, protein transloc...	[more]
XP_022137357.1	1.3e-27	100.00	uncharacterized protein LOC111008832 isoform X1 [Momordica charantia]	[more]
XP_008439824.1	1.3e-27	100.00	PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_0116...	[more]
XP_022137358.1	1.3e-27	100.00	uncharacterized protein LOC111008832 isoform X2 [Momordica charantia]	[more]

BLAST of Carg07607 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38385	4.9e-30	98.53	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX...	[more]
P0DI74	1.4e-29	94.12	Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DI75	1.4e-29	94.12	Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SMP2	1.0e-27	88.24	Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7Z1B8	8.3e-22	75.00	Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349...	[more]

BLAST of Carg07607 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P6P9U4	4.7e-28	91.67	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0208811 PE=3...	[more]
A0A6J1JW08	6.2e-28	100.00	protein transport protein Sec61 subunit gamma OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1GT74	6.2e-28	100.00	protein transport protein Sec61 subunit gamma OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3BJ11	6.2e-28	100.00	Protein transport protein Sec61 subunit gamma OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1CA50	6.2e-28	100.00	uncharacterized protein LOC111008832 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg07607 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24920.1	1.0e-30	94.12	secE/sec61-gamma protein transport protein	[more]
AT5G50460.1	1.0e-30	94.12	secE/sec61-gamma protein transport protein	[more]
AT3G48570.1	7.2e-29	88.24	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 13..65 e-value: 4.3E-14 score: 52.2
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PROSITE	PS01067	SECE_SEC61G	coord: 14..42
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	HAMAP	MF_00422	SecE	coord: 9..64 score: 12.919514
IPR023391	Protein translocase SecE domain superfamily	GENE3D	1.20.5.820	Preprotein translocase SecE subunit	coord: 7..68 e-value: 2.9E-31 score: 108.9
IPR023391	Protein translocase SecE domain superfamily	SUPERFAMILY	103456	Preprotein translocase SecE subunit	coord: 5..65
IPR008158	Protein translocase SEC61 complex, gamma subunit	TIGRFAM	TIGR00327	TIGR00327	coord: 8..66 e-value: 3.6E-16 score: 56.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..107
None	No IPR available	PANTHER	PTHR12309	SEC61 GAMMA SUBUNIT	coord: 1..69
None	No IPR available	PANTHER	PTHR12309:SF24	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07607-RA	Carg07607-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071261	Ssh1 translocon complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity