Carg07287 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07287
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box/LRR-repeat protein 17-like
Location	Carg_Chr17: 8811788 .. 8813806 (-)
RNA-Seq Expression	Carg07287
Synteny	Carg07287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGGTGAGTTTTTTTATTCTTCTCTTACCTCTTAACTGATGATCTCCTTGAAACTGACTATAATCCATATATCAGATGGCAAGTTTTTCTCCTAATAATATTGGATATATATGTCTGCTCGCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGGTACACAAATTGATTACTTGACTTTAATCTCCTACTGAATTTGAGGATTGGTTACCTGGAAAGTGGCGACAATCCATGTACATGGTAGATGGCTCAACGAAGAATCAGCACTCTGATGTGATTATGCATCTCTTTTGTCAATTTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGGTAACTAACAAGTTTAGGAGTATTTTAACACGGAATCGGAATAAAAAAAAGTCCAATACTCAATTTCATGTAGTATAATTTCTTTCTCAATTGTTCAATTCACATATTTGGCTTCATGAATCCAATTAATATCCTAATCTACACAATGATGCATACACAAACTTCATGTAGTAGTAAATAACAGTGATCTTGTTCTTGTTGGCAGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAAACAGTTCAGAAGTTCATAATGTTTTTCTTCTTGGCACACTGATAGTAATTGTGCGTTGTGTATTAGAGCCAATGAAGGCAGAGTGCAGCTGCCATCCATTTGGGGTTATAGGCAGAGCACCTCGCCAGTGTAAACATTTTTATTTGTAACACTTCCACACTTCCTAAAACTATATTTTTCAGTATGGAACTGAGTCCAGTACCCAGAGCCAAGCCATACATGGAAAGCTTATTAGGGTTTATAAGTTCTTTTTCTTTCCCCCCAATAAAGAACGATAGTTATTTATGATTAATTATTATTTGAGCACTACTTGATTGACTCCACTTGGTTGTAAGTTCATGTTCTGGAAGATGAGATTCGGAGTTCAGGGCAGGACTTGGAGGATTTATTATTCAAGGTCACCTACACTAGGTCGTGGTGGTGGCCCTCCAAATTCTTGGATGCTCGGTCAAACGGTATAAAACTATTAGCCACATTGGTTCGGTCTCAATTAAGAAGCTAGTTCCTTTGACTCGAGACAGCTCTCTTTTGCCTAAGTATTATAGGGAAAATCTCGACCTAATCTACAAGGCTAAATAGGTACGTCAAATCTCAGCTATGTTCAATTTTATGCTTCATTAAATTTGATTCTTGATTTTTTGATATCATCGTCTTCCTTCACTTGCTATCGATTGATGAAGGTGGGTTTGAAGAATTTCACTTCAATCAAAACTAACGCAAAATTGAAAAATATCACACGTGGAAAGACACCCAAAAGACAGGCACACGCAATACACATTAATCGATCACGAACACACAGTCACAATCCACATGTGGCAGAGAGACAAAGAAACACATCAAATTAAAAGTTTGATTAACACCCAAAGTTCGAACTTTTTTCTTTCCTTTTCTTTTTAAATACTTAAAAGCGTTTTTTTAACACAATTTTAAAGCTTAGCTAGCCATTGCATTATTAGCACAAAAAAAGACATTTTCAATAAATAACATAAACAGCAAACCCAAAACATGAATGGGTCATCCACATAAATGCCTTCTTCAACCATCCACATGACCTTGTTCCCTATGCTCAACCATCCATATGGAACATTTCCATTTAATTATTGGCCCTCTCCTCTATATA

mRNA sequence

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAAACAGTTCAGAAGTTCATAATGTTTTTCTTCTTGGCACACTGATAGTAATTGTGCGTTGTGTATTAGAGCCAATGAAGGCAGAGTGCAGCTGCCATCCATTTGGGGTTATAGGCAGAGCACCTCGCCAGTGTAAACATTTTTATTTGTAACACTTCCACACTTCCTAAAACTATATTTTTCAGTATGGAACTGAGTCCAGTACCCAGAGCCAAGCCATACATGGAAAGCTTATTAGGGTTTATAAGTTCTTTTTCTTTCCCCCCAATAAAGAACGATAGTTATTTATGATTAATTATTATTTGAGCACTACTTGATTGACTCCACTTGGTTGTAAGTTCATGTTCTGGAAGATGAGATTCGGAGTTCAGGGCAGGACTTGGAGGATTTATTATTCAAGGTCACCTACACTAGGTCGTGGTGGTGGCCCTCCAAATTCTTGGATGCTCGGTCAAACGGTATAAAACTATTAGCCACATTGGTTCGGTCTCAATTAAGAAGCTAGTTCCTTTGACTCGAGACAGCTCTCTTTTGCCTAAGTATTATAGGGAAAATCTCGACCTAATCTACAAGGCTAAATAGGTACGTCAAATCTCAGCTATGTTCAATTTTATGCTTCATTAAATTTGATTCTTGATTTTTTGATATCATCGTCTTCCTTCACTTGCTATCGATTGATGAAGGTGGGTTTGAAGAATTTCACTTCAATCAAAACTAACGCAAAATTGAAAAATATCACACGTGGAAAGACACCCAAAAGACAGGCACACGCAATACACATTAATCGATCACGAACACACAGTCACAATCCACATGTGGCAGAGAGACAAAGAAACACATCAAATTAAAAGTTTGATTAACACCCAAAGTTCGAACTTTTTTCTTTCCTTTTCTTTTTAAATACTTAAAAGCGTTTTTTTAACACAATTTTAAAGCTTAGCTAGCCATTGCATTATTAGCACAAAAAAAGACATTTTCAATAAATAACATAAACAGCAAACCCAAAACATGAATGGGTCATCCACATAAATGCCTTCTTCAACCATCCACATGACCTTGTTCCCTATGCTCAACCATCCATATGGAACATTTCCATTTAATTATTGGCCCTCTCCTCTATATA

Coding sequence (CDS)

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAA

Protein sequence

MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAPEENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLMSSDNYTKRRRVGSHQCNILMS

Homology

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: KAG7014477.1 (F-box/LRR-repeat protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.2 bits (718), Expect = 5.0e-72
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM
Sbjct: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 121 SSDNYTKRRRVGSHQCNILMS 141

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: KAG6575945.1 (F-box/LRR-repeat protein 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 105/141 (74.47%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 480 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 539

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 540 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 586

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 600 SSDNYTKRRRVGSHQCNILMS 586

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_023548623.1 (F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 105/141 (74.47%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 484 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 543

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 544 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 590

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 604 SSDNYTKRRRVGSHQCNILMS 590

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_022954395.1 (F-box/LRR-repeat protein 17-like [Cucurbita moschata])

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 105/141 (74.47%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 480 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 539

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 540 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 586

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 600 SSDNYTKRRRVGSHQCNILMS 586

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_022991271.1 (F-box/LRR-repeat protein 17-like [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 4.7e-46
Identity = 103/141 (73.05%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSL+TVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 484 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLQTVHASDCKELVVGAIRIQLDKAAAP 543

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 544 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 590

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSD+YTKRRRVGSHQCNILMS
Sbjct: 604 SSDDYTKRRRVGSHQCNILMS 590

[Close]

BLAST of Carg07287 vs. ExPASy Swiss-Prot
Match: Q8W104 (F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-19
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + AL+LNCP+L DLNLN C NLHPE L+LQCP L+ V+AS C+ L+ GAIR Q+ +  + 
Sbjct: 485 LDALFLNCPELMDLNLNLCSNLHPESLVLQCPKLQLVYASGCQGLLTGAIRKQVSENFSA 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQN 91
            EN +  KRLAD SKRI+  P +  +  ++
Sbjct: 545 GENHMPRKRLADASKRIQALPSLYQETRED 574

[Close]

BLAST of Carg07287 vs. ExPASy TrEMBL
Match: A0A6J1GSA8 (F-box/LRR-repeat protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111456645 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.1e-47
Identity = 105/141 (74.47%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 480 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 539

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 540 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 586

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 600 SSDNYTKRRRVGSHQCNILMS 586

[Close]

BLAST of Carg07287 vs. ExPASy TrEMBL
Match: A0A6J1JQA0 (F-box/LRR-repeat protein 17-like OS=Cucurbita maxima OX=3661 GN=LOC111487973 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.3e-46
Identity = 103/141 (73.05%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPERLLLQCPSL+TVHASDCKELVVGAIRIQLDKAAAP
Sbjct: 484 LDALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLQTVHASDCKELVVGAIRIQLDKAAAP 543

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 544 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 590

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSD+YTKRRRVGSHQCNILMS
Sbjct: 604 SSDDYTKRRRVGSHQCNILMS 590

[Close]

BLAST of Carg07287 vs. ExPASy TrEMBL
Match: A0A0A0K8R2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-42
Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPERLLLQCP LR VHASDC+EL+VGAIR QL+KAAAP
Sbjct: 481 LDALYLNCPQLDDLNLNSCKNLHPERLLLQCPGLRNVHASDCEELLVGAIRTQLNKAAAP 540

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 541 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 587

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 601 SSDNYTKRRKVGSHQCKILVS 587

[Close]

BLAST of Carg07287 vs. ExPASy TrEMBL
Match: A0A1S4DYH7 (F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-42
Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPERLLLQCP LR VHASDC+EL+VGAIR QL+KAAAP
Sbjct: 486 LDALYLNCPQLDDLNLNSCKNLHPERLLLQCPGLRNVHASDCEELLVGAIRTQLNKAAAP 545

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 546 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 592

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 606 SSDNYTKRRKVGSHQCKILVS 592

[Close]

BLAST of Carg07287 vs. ExPASy TrEMBL
Match: A0A1S3BR56 (F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-42
Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPERLLLQCP LR VHASDC+EL+VGAIR QL+KAAAP
Sbjct: 485 LDALYLNCPQLDDLNLNSCKNLHPERLLLQCPGLRNVHASDCEELLVGAIRTQLNKAAAP 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 545 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 591

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 605 SSDNYTKRRKVGSHQCKILVS 591

[Close]

BLAST of Carg07287 vs. TAIR 10
Match: AT3G54650.1 (RNI-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-20
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAP 60
           + AL+LNCP+L DLNLN C NLHPE L+LQCP L+ V+AS C+ L+ GAIR Q+ +  + 
Sbjct: 485 LDALFLNCPELMDLNLNLCSNLHPESLVLQCPKLQLVYASGCQGLLTGAIRKQVSENFSA 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQN 91
            EN +  KRLAD SKRI+  P +  +  ++
Sbjct: 545 GENHMPRKRLADASKRIQALPSLYQETRED 574

The following BLAST results are available for this feature:

BLAST of Carg07287 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014477.1	5.0e-72	100.00	F-box/LRR-repeat protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6575945.1	4.2e-47	74.47	F-box/LRR-repeat protein 17, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548623.1	4.2e-47	74.47	F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954395.1	4.2e-47	74.47	F-box/LRR-repeat protein 17-like [Cucurbita moschata]	[more]
XP_022991271.1	4.7e-46	73.05	F-box/LRR-repeat protein 17-like [Cucurbita maxima]	[more]

BLAST of Carg07287 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W104	3.9e-19	51.11	F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1	[more]

BLAST of Carg07287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSA8	2.1e-47	74.47	F-box/LRR-repeat protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111456645 P...	[more]
A0A6J1JQA0	2.3e-46	73.05	F-box/LRR-repeat protein 17-like OS=Cucurbita maxima OX=3661 GN=LOC111487973 PE=...	[more]
A0A0A0K8R2	5.8e-42	65.96	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 ...	[more]
A0A1S4DYH7	5.8e-42	65.96	F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]
A0A1S3BR56	5.8e-42	65.96	F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]

BLAST of Carg07287 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54650.1	2.8e-20	51.11	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..92 e-value: 1.6E-5 score: 25.4
None	No IPR available	PANTHER	PTHR13382:SF18	F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1	coord: 2..89
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 2..89
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 6..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07287-RA	Carg07287-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm