Carg07277 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07277
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein indeterminate-domain 9-like
Location	Carg_Chr17: 8724763 .. 8725392 (+)
RNA-Seq Expression	Carg07277
Synteny	Carg07277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

mRNA sequence

ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

Coding sequence (CDS)

ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

Protein sequence

MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGIEMFKPHNNNNNSNGFGYGEAAANGTWGDC

Homology

[Close]

BLAST of Carg07277 vs. NCBI nr
Match: KAG6575934.1 (Zinc finger protein NUTCRACKER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN
Sbjct: 267 MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 326

Query: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120
           LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH
Sbjct: 327 LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 386

Query: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 180
           ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI
Sbjct: 387 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 446

Query: 181 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 210
           EMFKPHNNNNNSNGFGYGEAAANGTWGDC
Sbjct: 447 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 475

[Close]

BLAST of Carg07277 vs. NCBI nr
Match: KAG7014467.1 (Protein indeterminate-domain 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN
Sbjct: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60

Query: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120
           LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH
Sbjct: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120

Query: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 180
           ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI
Sbjct: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 180

Query: 181 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 210
           EMFKPHNNNNNSNGFGYGEAAANGTWGDC
Sbjct: 181 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 209

[Close]

BLAST of Carg07277 vs. NCBI nr
Match: XP_022953328.1 (protein indeterminate-domain 9-like [Cucurbita moschata])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN
Sbjct: 302 MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 361

Query: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120
           LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH
Sbjct: 362 LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 421

Query: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 180
           ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI
Sbjct: 422 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 481

Query: 181 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 210
           EMFKPHNNNNNSNGFGYGEAAANGTWGDC
Sbjct: 482 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 510

[Close]

BLAST of Carg07277 vs. NCBI nr
Match: XP_023547799.1 (protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 198/210 (94.29%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKA-RSSSSSSSSMITSPFR 60
           MIKPEDSNSHHF QIPNLPLSDDSSNNNNYHPFGLIQDHHHKA  SSSSSSSSMITSPFR
Sbjct: 273 MIKPEDSNSHHFHQIPNLPLSDDSSNNNNYHPFGLIQDHHHKASSSSSSSSSSMITSPFR 332

Query: 61  NLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSN 120
           NLHVSVQPASN ATSA LSATALLQKAATVGI AAKSGHHQPESVGHITHFNIPEFRPSN
Sbjct: 333 NLHVSVQPASNAATSAQLSATALLQKAATVGIGAAKSGHHQPESVGHITHFNIPEFRPSN 392

Query: 121 HISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGG 180
           HISSLSQLGPDYATWQKSDRLTRDFLGLTGH    GSGSGSGG+VHVSMIVKDMLTYAGG
Sbjct: 393 HISSLSQLGPDYATWQKSDRLTRDFLGLTGH----GSGSGSGGAVHVSMIVKDMLTYAGG 452

Query: 181 IEMFKPHNNNNNSNGFGYGEAAANGTWGDC 210
            EMFKPHNNNNNSNGFGYGEAAANGTWGDC
Sbjct: 453 TEMFKPHNNNNNSNGFGYGEAAANGTWGDC 478

[Close]

BLAST of Carg07277 vs. NCBI nr
Match: XP_022992042.1 (protein indeterminate-domain 9-like [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 3.2e-99
Identity = 194/212 (91.51%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHF QIPNLPLSDDSSNNNNYHPFGLIQDHHHKA SSSSSSSSMITSPFRN
Sbjct: 271 MIKPEDSNSHHFHQIPNLPLSDDSSNNNNYHPFGLIQDHHHKASSSSSSSSSMITSPFRN 330

Query: 61  LHVSVQPASNVATSAHLSATALLQKAAT--VGIDAAKSGHHQPESVGHITHFNIPEFRPS 120
           LHVSVQPASN ATSAHLSATALLQKAAT  VG+ AAKSG HQPES GHITHFNIPEFRPS
Sbjct: 331 LHVSVQPASNAATSAHLSATALLQKAATVGVGVGAAKSGQHQPESAGHITHFNIPEFRPS 390

Query: 121 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAG 180
           NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVH SMIVKDML YA 
Sbjct: 391 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHFSMIVKDMLMYAD 450

Query: 181 GIEMFKPHNNNNN-SNGFGYGEAAANGTWGDC 210
           G    KPHNNNNN SNGFGYGEAAANGTW DC
Sbjct: 451 G----KPHNNNNNSSNGFGYGEAAANGTWEDC 478

[Close]

BLAST of Carg07277 vs. ExPASy Swiss-Prot
Match: O22759 (Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 8.1e-13
Identity = 68/173 (39.31%), Postives = 84/173 (48.55%), Query Frame = 0


Query: 21  SDDSSNNNNYHPFGLIQDHHHKARSSSS---SSSSMITSPFRNLHVSVQPASNVATSAHL 80
           S  SSN  N +P    Q HH     SSS   +SS +   P     +S    S   T+A L
Sbjct: 219 STSSSNLTNPNP--NFQGHHFMFNKSSSLLFTSSPLFIEP----SLSTAALSTPPTAA-L 278

Query: 81  SATALLQKAATVGIDAAKSGHHQPESVGHITHF-NIPEFRPSNHISSLSQLGPDY----- 140
           SATALLQKA ++       G  Q  S+GH  H  N+ EF   + +   S    +Y     
Sbjct: 279 SATALLQKATSLS-STTFGGGGQTRSIGHHRHLTNVNEFLGVDRVMMTSASSSEYDQLVV 338

Query: 141 ----ATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 181
               +TWQK+DRLTRDFLGLTGHG             HVS+   DML YAGG+
Sbjct: 339 DGFTSTWQKADRLTRDFLGLTGHGG------------HVSVRPGDMLEYAGGV 371

[Close]

BLAST of Carg07277 vs. ExPASy TrEMBL
Match: A0A6J1GN29 (protein indeterminate-domain 9-like OS=Cucurbita moschata OX=3662 GN=LOC111455911 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN
Sbjct: 302 MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 361

Query: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120
           LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH
Sbjct: 362 LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 421

Query: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 180
           ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI
Sbjct: 422 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 481

Query: 181 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 210
           EMFKPHNNNNNSNGFGYGEAAANGTWGDC
Sbjct: 482 EMFKPHNNNNNSNGFGYGEAAANGTWGDC 510

[Close]

BLAST of Carg07277 vs. ExPASy TrEMBL
Match: A0A6J1JNM0 (protein indeterminate-domain 9-like OS=Cucurbita maxima OX=3661 GN=LOC111488512 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 194/212 (91.51%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 1   MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRN 60
           MIKPEDSNSHHF QIPNLPLSDDSSNNNNYHPFGLIQDHHHKA SSSSSSSSMITSPFRN
Sbjct: 271 MIKPEDSNSHHFHQIPNLPLSDDSSNNNNYHPFGLIQDHHHKASSSSSSSSSMITSPFRN 330

Query: 61  LHVSVQPASNVATSAHLSATALLQKAAT--VGIDAAKSGHHQPESVGHITHFNIPEFRPS 120
           LHVSVQPASN ATSAHLSATALLQKAAT  VG+ AAKSG HQPES GHITHFNIPEFRPS
Sbjct: 331 LHVSVQPASNAATSAHLSATALLQKAATVGVGVGAAKSGQHQPESAGHITHFNIPEFRPS 390

Query: 121 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAG 180
           NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVH SMIVKDML YA 
Sbjct: 391 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHFSMIVKDMLMYAD 450

Query: 181 GIEMFKPHNNNNN-SNGFGYGEAAANGTWGDC 210
           G    KPHNNNNN SNGFGYGEAAANGTW DC
Sbjct: 451 G----KPHNNNNNSSNGFGYGEAAANGTWEDC 478

[Close]

BLAST of Carg07277 vs. ExPASy TrEMBL
Match: A0A5D3DQN1 (GATA zinc finger domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15171G00010 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 164/232 (70.69%), Postives = 179/232 (77.16%), Query Frame = 0


Query: 1   MIKPEDS------NSHHFQQIPNLPLSD-DSSNNNNYHPFGLIQDH--HH--KARSSSSS 60
           +IKPEDS      NSH+F QIPNLPLS+  SSNNNN + FGLIQ+H  HH  + ++ SSS
Sbjct: 113 VIKPEDSNSHPSHNSHNFHQIPNLPLSNSSSSNNNNNNHFGLIQEHQQHHQQQQKAPSSS 172

Query: 61  SSSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITH 120
           +SSMITSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITH
Sbjct: 173 TSSMITSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVGASKSGHHQAESAGHITH 232

Query: 121 F---NIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGN-GTGSGSGSGGSVH 180
           F   NIPEF   NHI SLSQLGPDYATWQK+DRLTRDFLGLTG GN G G GS   G V 
Sbjct: 233 FNMPNIPEFGQPNHIDSLSQLGPDYATWQKTDRLTRDFLGLTGDGNGGAGGGSAGDGVVQ 292

Query: 181 VSMIVKDMLTYAGGIEMFKPH--------NNNNNSNGFGYGEAAANGTWGDC 210
           VS+ VKDMLTYAGG+EMFKPH        NNNNN+N FGYGE AAN  WGDC
Sbjct: 293 VSLSVKDMLTYAGGLEMFKPHNNNNNHSNNNNNNNNNFGYGEPAANEAWGDC 344

[Close]

BLAST of Carg07277 vs. ExPASy TrEMBL
Match: A0A5A7V6H0 (GATA zinc finger domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6065G00010 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 164/232 (70.69%), Postives = 179/232 (77.16%), Query Frame = 0


Query: 1   MIKPEDS------NSHHFQQIPNLPLSD-DSSNNNNYHPFGLIQDH--HH--KARSSSSS 60
           +IKPEDS      NSH+F QIPNLPLS+  SSNNNN + FGLIQ+H  HH  + ++ SSS
Sbjct: 77  VIKPEDSNSHPSHNSHNFHQIPNLPLSNSSSSNNNNNNHFGLIQEHQQHHQQQQKAPSSS 136

Query: 61  SSSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITH 120
           +SSMITSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITH
Sbjct: 137 TSSMITSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVGASKSGHHQAESAGHITH 196

Query: 121 F---NIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGN-GTGSGSGSGGSVH 180
           F   NIPEF   NHI SLSQLGPDYATWQK+DRLTRDFLGLTG GN G G GS   G V 
Sbjct: 197 FNMPNIPEFGQPNHIDSLSQLGPDYATWQKTDRLTRDFLGLTGDGNGGAGGGSAGDGVVQ 256

Query: 181 VSMIVKDMLTYAGGIEMFKPH--------NNNNNSNGFGYGEAAANGTWGDC 210
           VS+ VKDMLTYAGG+EMFKPH        NNNNN+N FGYGE AAN  WGDC
Sbjct: 257 VSLSVKDMLTYAGGLEMFKPHNNNNNHSNNNNNNNNNFGYGEPAANEAWGDC 308

[Close]

BLAST of Carg07277 vs. ExPASy TrEMBL
Match: A0A1S3BQL4 (GATA zinc finger domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103492646 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.9e-74
Identity = 163/231 (70.56%), Postives = 178/231 (77.06%), Query Frame = 0


Query: 1   MIKPEDS------NSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDH--HH--KARSSSSSS 60
           +IKPEDS      NSH+F QIPNLPLS+ SS+NNN H FGLIQ+H  HH  + ++ SSS+
Sbjct: 113 IIKPEDSNSHPSHNSHNFHQIPNLPLSNSSSSNNNNH-FGLIQEHQQHHQQQQKAPSSST 172

Query: 61  SSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHF 120
           SSMITSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITHF
Sbjct: 173 SSMITSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVGASKSGHHQAESAGHITHF 232

Query: 121 ---NIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGN-GTGSGSGSGGSVHV 180
              NIPEF   NHI SLSQL PDYATWQK+DRLTRDFLGLTG GN G G GS   G V V
Sbjct: 233 NMPNIPEFGQPNHIDSLSQLDPDYATWQKTDRLTRDFLGLTGDGNGGAGGGSAGDGVVQV 292

Query: 181 SMIVKDMLTYAGGIEMFKPH--------NNNNNSNGFGYGEAAANGTWGDC 210
           S+ VKDMLTYAGG+EMFKPH        NNNNN+N FGYGE AAN  WGDC
Sbjct: 293 SLSVKDMLTYAGGLEMFKPHNNNNNNSNNNNNNNNNFGYGEPAANEAWGDC 342

[Close]

BLAST of Carg07277 vs. TAIR 10
Match: AT4G02670.1 (indeterminate(ID)-domain 12 )

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14
Identity = 68/173 (39.31%), Postives = 84/173 (48.55%), Query Frame = 0


Query: 21  SDDSSNNNNYHPFGLIQDHHHKARSSSS---SSSSMITSPFRNLHVSVQPASNVATSAHL 80
           S  SSN  N +P    Q HH     SSS   +SS +   P     +S    S   T+A L
Sbjct: 219 STSSSNLTNPNP--NFQGHHFMFNKSSSLLFTSSPLFIEP----SLSTAALSTPPTAA-L 278

Query: 81  SATALLQKAATVGIDAAKSGHHQPESVGHITHF-NIPEFRPSNHISSLSQLGPDY----- 140
           SATALLQKA ++       G  Q  S+GH  H  N+ EF   + +   S    +Y     
Sbjct: 279 SATALLQKATSLS-STTFGGGGQTRSIGHHRHLTNVNEFLGVDRVMMTSASSSEYDQLVV 338

Query: 141 ----ATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGI 181
               +TWQK+DRLTRDFLGLTGHG             HVS+   DML YAGG+
Sbjct: 339 DGFTSTWQKADRLTRDFLGLTGHGG------------HVSVRPGDMLEYAGGV 371

The following BLAST results are available for this feature:

BLAST of Carg07277 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575934.1	2.3e-113	100.00	Zinc finger protein NUTCRACKER, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7014467.1	2.3e-113	100.00	Protein indeterminate-domain 12, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022953328.1	2.3e-113	100.00	protein indeterminate-domain 9-like [Cucurbita moschata]	[more]
XP_023547799.1	1.6e-103	94.29	protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992042.1	3.2e-99	91.51	protein indeterminate-domain 9-like [Cucurbita maxima]	[more]

BLAST of Carg07277 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22759	8.1e-13	39.31	Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV...	[more]

BLAST of Carg07277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GN29	1.1e-113	100.00	protein indeterminate-domain 9-like OS=Cucurbita moschata OX=3662 GN=LOC11145591...	[more]
A0A6J1JNM0	1.5e-99	91.51	protein indeterminate-domain 9-like OS=Cucurbita maxima OX=3661 GN=LOC111488512 ...	[more]
A0A5D3DQN1	1.3e-74	70.69	GATA zinc finger domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V6H0	1.3e-74	70.69	GATA zinc finger domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BQL4	2.9e-74	70.56	GATA zinc finger domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Carg07277 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02670.1	5.7e-14	39.31	indeterminate(ID)-domain 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07277-RA	Carg07277-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding