Carg07260 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07260
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein D-34-like
LocationCarg_Chr17: 8636282 .. 8637505 (-)
RNA-Seq ExpressionCarg07260
SyntenyCarg07260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCAAGCACAGCCCCAAAGACCCGCCGAGGAGTATCAGGATCCCATCAAATATGGCGACGTTTTCGACGTCTCCGGCGACTTGGCTTCCAAACCCATTGCCCCTCGTGATGCTGCCACCATGCAGGCCGCCGAGAATATGCTCCTCGGCCAGACTCCACGCGGCGGCCCCGCTGCTGTTATGCAGTCCGCTGCCAACATCAACGAACGCACTGGCCTTGTCGGTCACTCCGACGTGACCGATGTCGCTCGAGACCAAGGCGTCACTGTCACTCGTTGACGACCAACGAGTCATCGTTGAGTCCATTGGCGGTCAGGTAAAAATTGCTAAAAATACATTTTTATTAAGCTCTTGTAATTTTGTTTTGGGTTTTTCTAAAGGGGCTCCTAGGTGGGTCTCTCCCAACCCTCCTCTCCTCGAACAAAGTACACCATAGAGCCTCCTACGAGGTTTATATAGCCTTTGAACAGTCTCCTCTCAATCGAAGTTTGACTTCTTTTTTTAGTCTTCGAACAAAGTACACTATTTGTTCACACATGAGTCACTCTTGACTTTTTGACTATACCAACGTGAGTCACTCTTGACTACACTTTCACTTTGATATCATGTTAAGAATCAGACTCTCCACGACATTGTATATTATGATAGGTTCAATTTTGAGTATAAGCTTTCGTGACCTTGCTTGCGGCTTAGGTGGTGGGACAATACGTTCAACCTAACGTTCCAATGAGATCTCCCGGAGCAACGCTCGACAAGGACTCAATAACTATTGGGGAAGCCTTAGAAGCAAGTGCAATAAGCGCAGGAGACAAGCCCATCGACCAAAGCGACGCAGCCGCAATCCAAGCGGCGGAGGTAAGAGCCACAGGGAAGAACGAGATAACACCCGGTGGCATAGGGGCGGAGGCGCAGTCTGCCGCCTCGCTCAACACACGAGCCATGCGGGACCAGGACAAGACAACACTGGGCGACATTCTAACCGTAATTCTCGCATCAAAATTCAGTTGCGTTCTTTCTTAAAACTCTTTAACCCATTGACACGTGTTGATTTTTTAAAAGGATGCCACGCGTAAGCTGCCGGAAGACAAGGCAGTGACGAAGGAAGATGCAGAGAGAGTGATAAGCGCAGAGATAAGGAACGACCCGACAATGACCACCACGCCCGGAGGAGTGGCGGCGTCGGTGGCGGCGGCGGCGAGGATCAACCAACAACAGGGCTAG

mRNA sequence

ATGAGCCAAGCACAGCCCCAAAGACCCGCCGAGGAGTATCAGGATCCCATCAAATATGGCGACGTTTTCGACGTCTCCGGCGACTTGGCTTCCAAACCCATTGCCCCTCGTGATGCTGCCACCATGCAGGCCGCCGAGAATATGCTCCTCGGCCAGACTCCACGCGGCGGCCCCGCTGCTGTTATGCAGTCCGCTGCCAACATCAACGAACGCACTGGCCTTGTCGGTCACTCCGACGTGACCGATGTCGCTCGAGACCAAGGCGTCACTGACTCAATAACTATTGGGGAAGCCTTAGAAGCAAGTGCAATAAGCGCAGGAGACAAGCCCATCGACCAAAGCGACGCAGCCGCAATCCAAGCGGCGGAGGTAAGAGCCACAGGGAAGAACGAGATAACACCCGGTGGCATAGGGGCGGAGGCGCAGTCTGCCGCCTCGCTCAACACACGAGCCATGCGGGACCAGGACAAGACAACACTGGGCGACATTCTAACCGATGCCACGCGTAAGCTGCCGGAAGACAAGGCAGTGACGAAGGAAGATGCAGAGAGAGTGATAAGCGCAGAGATAAGGAACGACCCGACAATGACCACCACGCCCGGAGGAGTGGCGGCGTCGGTGGCGGCGGCGGCGAGGATCAACCAACAACAGGGCTAG

Coding sequence (CDS)

ATGAGCCAAGCACAGCCCCAAAGACCCGCCGAGGAGTATCAGGATCCCATCAAATATGGCGACGTTTTCGACGTCTCCGGCGACTTGGCTTCCAAACCCATTGCCCCTCGTGATGCTGCCACCATGCAGGCCGCCGAGAATATGCTCCTCGGCCAGACTCCACGCGGCGGCCCCGCTGCTGTTATGCAGTCCGCTGCCAACATCAACGAACGCACTGGCCTTGTCGGTCACTCCGACGTGACCGATGTCGCTCGAGACCAAGGCGTCACTGACTCAATAACTATTGGGGAAGCCTTAGAAGCAAGTGCAATAAGCGCAGGAGACAAGCCCATCGACCAAAGCGACGCAGCCGCAATCCAAGCGGCGGAGGTAAGAGCCACAGGGAAGAACGAGATAACACCCGGTGGCATAGGGGCGGAGGCGCAGTCTGCCGCCTCGCTCAACACACGAGCCATGCGGGACCAGGACAAGACAACACTGGGCGACATTCTAACCGATGCCACGCGTAAGCTGCCGGAAGACAAGGCAGTGACGAAGGAAGATGCAGAGAGAGTGATAAGCGCAGAGATAAGGAACGACCCGACAATGACCACCACGCCCGGAGGAGTGGCGGCGTCGGTGGCGGCGGCGGCGAGGATCAACCAACAACAGGGCTAG

Protein sequence

MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAAVMQSAANINERTGLVGHSDVTDVARDQGVTDSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQQG
Homology
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BLAST of Carg07260 vs. NCBI nr
Match: KAG7014451.1 (hypothetical protein SDJN02_24628, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTDSITIGEALEASAISAGDKPIDQSDAAAIQ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVTDSITIGEALEASAISAGDKPIDQSDAAAIQ
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTDSITIGEALEASAISAGDKPIDQSDAAAIQ 120

Query: 121 AAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKE 180
           AAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKE
Sbjct: 121 AAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKE 180

Query: 181 DAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQQG 219
           DAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQQG
Sbjct: 181 DAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQQG 218

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BLAST of Carg07260 vs. NCBI nr
Match: KAG6575918.1 (hypothetical protein SDJN03_26557, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 217/258 (84.11%), Postives = 217/258 (84.11%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVIVESIGGQVVGQYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASAISAGDKPIDQSDAAAIQAAE RATGKNEITPGGIGAE
Sbjct: 121 MRSPGATLDKDSITIGEALEASAISAGDKPIDQSDAAAIQAAEARATGKNEITPGGIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 240

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BLAST of Carg07260 vs. NCBI nr
Match: XP_023548951.1 (late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 8.4e-103
Identity = 217/258 (84.11%), Postives = 217/258 (84.11%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVILESIGGQVVGKYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATG NEITPGGIGAE
Sbjct: 121 MRSPGATLDKDSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGNNEITPGGIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 240

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BLAST of Carg07260 vs. NCBI nr
Match: XP_022953931.1 (late embryogenesis abundant protein D-34-like [Cucurbita moschata])

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 216/258 (83.72%), Postives = 217/258 (84.11%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVIVESIGGQVVGQYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASA+SAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE
Sbjct: 121 MRSPGATLDKDSITIGEALEASAMSAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTM TTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMATTP 240

[Close]
BLAST of Carg07260 vs. NCBI nr
Match: XP_022991963.1 (late embryogenesis abundant protein D-34-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 215/258 (83.33%), Postives = 216/258 (83.72%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQT RGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTLRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVIVESIGSQMVGQYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASA+SAGDKPIDQSDAAAIQAAEVRATGKNEITPG IGAE
Sbjct: 121 MRTPGATLDKDSITIGEALEASAMSAGDKPIDQSDAAAIQAAEVRATGKNEITPGSIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 240

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BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match: P09444 (Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-65
Identity = 144/260 (55.38%), Postives = 180/260 (69.23%), Query Frame = 0 

Query: 1   MSQAQPQRPAE-----EYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPR 60
           MSQ QP+RP +     E Q+PIKYGDVF+VSG+LA+KPIAP+DAA MQ AE  +LGQT +
Sbjct: 1   MSQGQPRRPQQPAGQGENQEPIKYGDVFNVSGELANKPIAPQDAAMMQTAETQVLGQTQK 60

Query: 61  GGPAAVMQSAANINERTGLVGHSDVTDVARDQGVT------------------------- 120
           GG AAVMQ+AA  NE+ G+VGH+D+TD+A +QGVT                         
Sbjct: 61  GGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVAGRRIITEAVAGQVVGQYV 120

Query: 121 ---------------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPG 180
                          ++ITIGEALEA+A +AGDKP+DQSDAAA+QAAEVRATG N I PG
Sbjct: 121 QATPVMTSQVGVVLQNAITIGEALEATAKTAGDKPVDQSDAAAVQAAEVRATGSNVIIPG 180

Query: 181 GIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPT 216
           G+ A AQSAA+ N    RD++K  L  +LT AT KLP DKAVT++DAE V+SAE+RN+P 
Sbjct: 181 GLAATAQSAAAHNATLDRDEEKIKLNQVLTGATAKLPADKAVTRQDAEGVVSAELRNNPN 240

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BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match: Q9LJ97 (Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-55
Identity = 132/260 (50.77%), Postives = 163/260 (62.69%), Query Frame = 0 

Query: 3   QAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAAVM 62
           + QP+RP    Q+P+ YGDVF+VSG+LA KPIAP DA  MQAAE  + G T +GG AAVM
Sbjct: 4   EEQPKRP----QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVM 63

Query: 63  QSAANINERTGLVGHSDVTDVARDQGVT-------------------------------- 122
           QSAA  N+R G V   D TD+A ++GVT                                
Sbjct: 64  QSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVAT 123

Query: 123 --------------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGG 182
                          +ITIGEALEA+  +AG+KP+DQSDAAAIQAAEVRA G N I PGG
Sbjct: 124 AAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPGG 183

Query: 183 IGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTM 217
           I A AQSAA+ N    RD+DK  L D+L  AT KL  DKAVT++DAE V+SAE+RN+P +
Sbjct: 184 IAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNPNL 243

[Close]
BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match: Q9LJ95 (Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-52
Identity = 127/257 (49.42%), Postives = 158/257 (61.48%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQ QP+RP E    P+KYGDVF+VSG+LA KPIAP DA  MQ+AE  + G T +GGPAA
Sbjct: 1   MSQEQPRRPRE----PVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAA  N R G V   D T++  ++G T                              
Sbjct: 61  VMQSAATTNIRGGFVHPDDKTELVAERGATVEQTVPAATVTTEFVGGQVVGQHVEPRRVV 120

Query: 121 -----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGA 180
                       +ITIGEALEA+  +AG+KP+DQSDAAAIQAAE+RA+G N I   G+ A
Sbjct: 121 AAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGVAA 180

Query: 181 EAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTT 217
            AQSAA  N    RD+ K  L D+LT A  KL  D+AVT+EDAE V+SAE+RN+P + T 
Sbjct: 181 SAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKLCTH 240

[Close]
BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match: Q8GWT7 (Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27980 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 97/185 (52.43%), Postives = 121/185 (65.41%), Query Frame = 0 

Query: 36  PRDAATMQAAENMLLGQTPRGGPAAVMQSAANINERTGLVGHSDVTD---VARDQGVTDS 95
           P D A ++  E   +  T  G  AA  +    + E +G     +V     VA       +
Sbjct: 9   PIDCADVK-GEAEKISTTEGGIKAAEDKEKGVVAEASGEQAEGEVNQKKVVANPLKSEGT 68

Query: 96  ITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTRAM 155
           ITIGEALEA+ ++AG+KP++ SDAAAIQAAEVRATG+  I PGG+ A AQSAA+LN R  
Sbjct: 69  ITIGEALEAAVLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNARIG 128

Query: 156 RDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAAAR 215
            D  KTTL D+LT A+ KLP DKA T++DAE V  AE+RNDP +TT P GVAASVAAAAR
Sbjct: 129 SDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAAR 188

Query: 216 INQQQ 218
           INQ +
Sbjct: 189 INQSK 192

[Close]
BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match: Q9SA57 (Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g03120 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 82/162 (50.62%), Postives = 110/162 (67.90%), Query Frame = 0 

Query: 69  NERTGLVGHSDVTDVARDQ--------------GVTDSITIGEALEASAISAGDKPIDQS 128
           +++ G+V      DVAR Q              G  D++TIGEALEA+A+S GDKP+D+ 
Sbjct: 20  HDQYGIVFSVSGDDVARKQGDSFSQPDPTVATMGSVDTVTIGEALEATALSLGDKPVDRR 79

Query: 129 DAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPED 188
           DAAAIQAAE RATG+++  PGG+   AQ+AA+ N + + ++DK  + DILTDA  +LP D
Sbjct: 80  DAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGD 139

Query: 189 KAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQ 217
           K VT EDAE V+ AE+R+   M TTPGGVA S++A AR+NQQ
Sbjct: 140 KVVTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQQ 181

[Close]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match: A0A6J1GPG9 (late embryogenesis abundant protein D-34-like OS=Cucurbita moschata OX=3662 GN=LOC111456338 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.1e-103
Identity = 216/258 (83.72%), Postives = 217/258 (84.11%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVIVESIGGQVVGQYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASA+SAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE
Sbjct: 121 MRSPGATLDKDSITIGEALEASAMSAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTM TTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMATTP 240

[Close]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match: A0A6J1JXR2 (late embryogenesis abundant protein D-34-like OS=Cucurbita maxima OX=3661 GN=LOC111488455 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 215/258 (83.33%), Postives = 216/258 (83.72%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQT RGGPAA
Sbjct: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTLRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAANINERTGLVGHSDVTDVARDQGVT                              
Sbjct: 61  VMQSAANINERTGLVGHSDVTDVARDQGVTVTETVVDDQRVIVESIGSQMVGQYVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSITIGEALEASA+SAGDKPIDQSDAAAIQAAEVRATGKNEITPG IGAE
Sbjct: 121 MRTPGATLDKDSITIGEALEASAMSAGDKPIDQSDAAAIQAAEVRATGKNEITPGSIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP
Sbjct: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 240

[Close]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match: A0A1S3BSB8 (late embryogenesis abundant protein D-34 OS=Cucumis melo OX=3656 GN=LOC103492655 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.4e-90
Identity = 192/258 (74.42%), Postives = 209/258 (81.01%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQAQPQRPAE+ QDPIKYGDVFDVSG+LASKPIAPRDAAT+QAAENM+LGQTPRGGPAA
Sbjct: 1   MSQAQPQRPAEDNQDPIKYGDVFDVSGELASKPIAPRDAATLQAAENMVLGQTPRGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAAN+NER GLVGHSDVTDVA ++GV                               
Sbjct: 61  VMQSAANLNERAGLVGHSDVTDVAVNEGVNVTETVVDGQRFVVESVGGQVVGQFVQPNVP 120

Query: 121 ----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAE 180
                     DSI+IGEALEASA+SAGDKPIDQSDAAAIQAAE+RATG+N+I PGGIGAE
Sbjct: 121 MRSPGATLDKDSISIGEALEASAVSAGDKPIDQSDAAAIQAAELRATGENKIIPGGIGAE 180

Query: 181 AQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTP 219
           AQSAA+LNTRAMR++DKTTLGDILTDATRKLP DK VTKEDAERVISAEIRN PTM TTP
Sbjct: 181 AQSAATLNTRAMRNEDKTTLGDILTDATRKLPGDKTVTKEDAERVISAEIRNAPTMATTP 240

[Close]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match: A0A5D3DRQ0 (Late embryogenesis abundant protein D-34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001500 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.7e-89
Identity = 187/248 (75.40%), Postives = 206/248 (83.06%), Query Frame = 0 

Query: 4   AQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAAVMQ 63
           +QPQRPAE+ QDPIKYGDVFDVSG+LASKPIAPRDAAT+QAAENM+LGQTPRGGPAAVMQ
Sbjct: 2   SQPQRPAEDNQDPIKYGDVFDVSGELASKPIAPRDAATLQAAENMVLGQTPRGGPAAVMQ 61

Query: 64  SAANINERTGLVGHSDVTDVARDQGVT--------------------------------- 123
           SAAN+NER GLVGHS+VTDVA ++GV                                  
Sbjct: 62  SAANLNERAGLVGHSEVTDVAVNEGVNVTETVVDGQRFVVVGQFVQPNVPMRSPGATLDK 121

Query: 124 DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTR 183
           DSI+IGEALEASA+SAGDKPIDQSDAAAIQAAE+RATG+N+I PGGIGAEAQSAA+LNTR
Sbjct: 122 DSISIGEALEASAVSAGDKPIDQSDAAAIQAAELRATGENKIIPGGIGAEAQSAATLNTR 181

Query: 184 AMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAA 219
           AMR++DKTTLGDILTDATRKLP DK VTKEDAERVISAEIRN PTM TTPGGVAASVAAA
Sbjct: 182 AMRNEDKTTLGDILTDATRKLPGDKTVTKEDAERVISAEIRNAPTMATTPGGVAASVAAA 241

[Close]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match: A0A0A0K4Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388330 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 184/259 (71.04%), Postives = 204/259 (78.76%), Query Frame = 0 

Query: 1   MSQAQPQRPA-EEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPA 60
           MSQ QPQRPA + Y+DP+KYGDVFDVSG+LASKPIAPRDAA++QAAEN++LGQTPRGGPA
Sbjct: 1   MSQGQPQRPAGDNYKDPVKYGDVFDVSGELASKPIAPRDAASLQAAENIILGQTPRGGPA 60

Query: 61  AVMQSAANINERTGLVGHSDVTDVARDQGV------------------------------ 120
           AVMQSAAN+NER GLVGHSDVTDVA ++GV                              
Sbjct: 61  AVMQSAANLNERAGLVGHSDVTDVALNEGVNVTETVVDGQRFVVESVGGQIVGRFVQPNV 120

Query: 121 ----------TDSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGA 180
                      DSI+IGEALEASA+SAGDKPI+QSDAAAIQAAEVRATG+N I PGGIGA
Sbjct: 121 PMRSPGATLDNDSISIGEALEASAVSAGDKPINQSDAAAIQAAEVRATGENNIIPGGIGA 180

Query: 181 EAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTT 219
           EAQSAA+LNTR M +++KTTLGDILTDATRKLP DK VTKEDAERVISAEIRND  M TT
Sbjct: 181 EAQSAATLNTRVMLNENKTTLGDILTDATRKLPGDKTVTKEDAERVISAEIRNDLKMATT 240

[Close]
BLAST of Carg07260 vs. TAIR 10
Match: AT3G22490.1 (Seed maturation protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-56
Identity = 132/260 (50.77%), Postives = 163/260 (62.69%), Query Frame = 0 

Query: 3   QAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAAVM 62
           + QP+RP    Q+P+ YGDVF+VSG+LA KPIAP DA  MQAAE  + G T +GG AAVM
Sbjct: 4   EEQPKRP----QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVM 63

Query: 63  QSAANINERTGLVGHSDVTDVARDQGVT-------------------------------- 122
           QSAA  N+R G V   D TD+A ++GVT                                
Sbjct: 64  QSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVAT 123

Query: 123 --------------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGG 182
                          +ITIGEALEA+  +AG+KP+DQSDAAAIQAAEVRA G N I PGG
Sbjct: 124 AAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPGG 183

Query: 183 IGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTM 217
           I A AQSAA+ N    RD+DK  L D+L  AT KL  DKAVT++DAE V+SAE+RN+P +
Sbjct: 184 IAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNPNL 243

[Close]
BLAST of Carg07260 vs. TAIR 10
Match: AT3G22500.1 (Seed maturation protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.7e-53
Identity = 127/257 (49.42%), Postives = 158/257 (61.48%), Query Frame = 0 

Query: 1   MSQAQPQRPAEEYQDPIKYGDVFDVSGDLASKPIAPRDAATMQAAENMLLGQTPRGGPAA 60
           MSQ QP+RP E    P+KYGDVF+VSG+LA KPIAP DA  MQ+AE  + G T +GGPAA
Sbjct: 1   MSQEQPRRPRE----PVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAA 60

Query: 61  VMQSAANINERTGLVGHSDVTDVARDQGVT------------------------------ 120
           VMQSAA  N R G V   D T++  ++G T                              
Sbjct: 61  VMQSAATTNIRGGFVHPDDKTELVAERGATVEQTVPAATVTTEFVGGQVVGQHVEPRRVV 120

Query: 121 -----------DSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGA 180
                       +ITIGEALEA+  +AG+KP+DQSDAAAIQAAE+RA+G N I   G+ A
Sbjct: 121 AAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGVAA 180

Query: 181 EAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTT 217
            AQSAA  N    RD+ K  L D+LT A  KL  D+AVT+EDAE V+SAE+RN+P + T 
Sbjct: 181 SAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKLCTH 240

[Close]
BLAST of Carg07260 vs. TAIR 10
Match: AT5G27980.1 (Seed maturation protein )

HSP 1 Score: 151.4 bits (381), Expect = 8.6e-37
Identity = 97/185 (52.43%), Postives = 121/185 (65.41%), Query Frame = 0 

Query: 36  PRDAATMQAAENMLLGQTPRGGPAAVMQSAANINERTGLVGHSDVTD---VARDQGVTDS 95
           P D A ++  E   +  T  G  AA  +    + E +G     +V     VA       +
Sbjct: 9   PIDCADVK-GEAEKISTTEGGIKAAEDKEKGVVAEASGEQAEGEVNQKKVVANPLKSEGT 68

Query: 96  ITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTRAM 155
           ITIGEALEA+ ++AG+KP++ SDAAAIQAAEVRATG+  I PGG+ A AQSAA+LN R  
Sbjct: 69  ITIGEALEAAVLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNARIG 128

Query: 156 RDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAAAR 215
            D  KTTL D+LT A+ KLP DKA T++DAE V  AE+RNDP +TT P GVAASVAAAAR
Sbjct: 129 SDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAAR 188

Query: 216 INQQQ 218
           INQ +
Sbjct: 189 INQSK 192

[Close]
BLAST of Carg07260 vs. TAIR 10
Match: AT1G03120.1 (responsive to abscisic acid 28 )

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34
Identity = 82/162 (50.62%), Postives = 110/162 (67.90%), Query Frame = 0 

Query: 69  NERTGLVGHSDVTDVARDQ--------------GVTDSITIGEALEASAISAGDKPIDQS 128
           +++ G+V      DVAR Q              G  D++TIGEALEA+A+S GDKP+D+ 
Sbjct: 20  HDQYGIVFSVSGDDVARKQGDSFSQPDPTVATMGSVDTVTIGEALEATALSLGDKPVDRR 79

Query: 129 DAAAIQAAEVRATGKNEITPGGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPED 188
           DAAAIQAAE RATG+++  PGG+   AQ+AA+ N + + ++DK  + DILTDA  +LP D
Sbjct: 80  DAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGD 139

Query: 189 KAVTKEDAERVISAEIRNDPTMTTTPGGVAASVAAAARINQQ 217
           K VT EDAE V+ AE+R+   M TTPGGVA S++A AR+NQQ
Sbjct: 140 KVVTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQQ 181

[Close]
BLAST of Carg07260 vs. TAIR 10
Match: AT5G53260.1 (Seed maturation protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-20
Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 0 

Query: 75  VGHSDVTDVARDQGVTDSITIGEALEASAISAGDKPIDQSDAAAIQAAEVRATGKNEITP 134
           VG ++    A +  +  S T+ EAL+A++++ G KP++ +D AAI+  E RA G +  + 
Sbjct: 31  VGPTEEISTAAEALIGRSTTLTEALKAASMNVGHKPVETTDVAAIKEVETRAIGGDIESE 90

Query: 135 GGIGAEAQSAASLNTRAMRDQDKTTLGDILTDATRKLPEDKAVTKEDAERVISAEIRNDP 194
           GG+ A A  A + N +  +D +KT LGD++ +   K+  D+ VT EDAE VI AE+ + P
Sbjct: 91  GGVTAVASKAVARNQKIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSP 150

Query: 195 TMTTTPGGVAASVAAAARIN 215
                PGGVA SVAAA ++N
Sbjct: 151 FNNIIPGGVAESVAAAYKLN 170

The following BLAST results are available for this feature:
BLAST of Carg07260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014451.12.7e-109100.00hypothetical protein SDJN02_24628, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575918.16.5e-10384.11hypothetical protein SDJN03_26557, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023548951.18.4e-10384.11late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo][more]
XP_022953931.11.9e-10283.72late embryogenesis abundant protein D-34-like [Cucurbita moschata][more]
XP_022991963.13.5e-10183.33late embryogenesis abundant protein D-34-like [Cucurbita maxima][more]
BLAST of Carg07260 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P094442.5e-6555.38Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1[more]
Q9LJ973.1e-5550.77Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 ... [more]
Q9LJ952.4e-5249.42Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 ... [more]
Q8GWT71.2e-3552.43Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27... [more]
Q9SA572.5e-3350.62Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g031... [more]
BLAST of Carg07260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GPG99.1e-10383.72late embryogenesis abundant protein D-34-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1JXR21.7e-10183.33late embryogenesis abundant protein D-34-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A1S3BSB81.4e-9074.42late embryogenesis abundant protein D-34 OS=Cucumis melo OX=3656 GN=LOC103492655... [more]
A0A5D3DRQ05.7e-8975.40Late embryogenesis abundant protein D-34 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0K4Y62.9e-8571.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388330 PE=3 SV=1[more]
BLAST of Carg07260 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22490.12.2e-5650.77Seed maturation protein [more]
AT3G22500.11.7e-5349.42Seed maturation protein [more]
AT5G27980.18.6e-3752.43Seed maturation protein [more]
AT1G03120.11.8e-3450.62responsive to abscisic acid 28 [more]
AT5G53260.17.3e-2040.00Seed maturation protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007011Late embryogenesis abundant protein, SMP subgroup domainPFAMPF04927SMPcoord: 158..216
e-value: 1.1E-20
score: 73.9
coord: 93..151
e-value: 3.2E-22
score: 78.8
coord: 17..71
e-value: 3.4E-18
score: 65.9
IPR042971Late embryogenesis abundant protein, SMP subgroupPANTHERPTHR31174SEED MATURATION FAMILY PROTEINcoord: 91..216
coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07260-RACarg07260-RAmRNA