Carg07186 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07186
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rapid alkalinization factor-like
Location	Carg_Chr17: 8188466 .. 8188822 (-)
RNA-Seq Expression	Carg07186
Synteny	Carg07186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCAAGCTTTCTTTTCTCCTTCCATTTTGCTTCATCGCTGCATTCCTGACCGTCTTCTCCACTGTGGTATTGGCCACCACCACAAAAGGCCCGAGTTGGGTCCTCGATCGAGCTCTAGCTACCTGTCATGGCTCCATGGCAGACTGCATGATGGACGACATTGAATTTCAGATGGACTCCGAAATCAATAGACGCATATTGGCCGATGTAAACTACATAAGCTACGATGCGCTCAGGGCCAACAAGGTGCCATGTTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCTGAGGCTAACCCCTACGACCGTGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAA

mRNA sequence

ATGGCGGCCAAGCTTTCTTTTCTCCTTCCATTTTGCTTCATCGCTGCATTCCTGACCGTCTTCTCCACTGTGGTATTGGCCACCACCACAAAAGGCCCGAGTTGGGTCCTCGATCGAGCTCTAGCTACCTGTCATGGCTCCATGGCAGACTGCATGATGGACGACATTGAATTTCAGATGGACTCCGAAATCAATAGACGCATATTGGCCGATGTAAACTACATAAGCTACGATGCGCTCAGGGCCAACAAGGTGCCATGTTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCTGAGGCTAACCCCTACGACCGTGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAA

Coding sequence (CDS)

ATGGCGGCCAAGCTTTCTTTTCTCCTTCCATTTTGCTTCATCGCTGCATTCCTGACCGTCTTCTCCACTGTGGTATTGGCCACCACCACAAAAGGCCCGAGTTGGGTCCTCGATCGAGCTCTAGCTACCTGTCATGGCTCCATGGCAGACTGCATGATGGACGACATTGAATTTCAGATGGACTCCGAAATCAATAGACGCATATTGGCCGATGTAAACTACATAAGCTACGATGCGCTCAGGGCCAACAAGGTGCCATGTTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCTGAGGCTAACCCCTACGACCGTGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAA

Protein sequence

MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQMDSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS

Homology

[Close]

BLAST of Carg07186 vs. NCBI nr
Match: KAG7014377.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Carg07186 vs. NCBI nr
Match: XP_022953165.1 (rapid alkalinization factor-like [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 2.6e-58
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAKLSFLLPFCFIAAFLTVFST V ATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Carg07186 vs. NCBI nr
Match: XP_038896330.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 3.0e-46
Identity = 95/118 (80.51%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAK+SFLLPF  +AA LTV ST VL T+TK PSWVLD A A CHGSMA+CMM DIEF+M
Sbjct: 1   MAAKVSFLLPFFLVAAILTVSSTAVLTTSTKTPSWVLDGARARCHGSMAECMMGDIEFEM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           +S+INRRILAD+NYISYDAL+AN VPCSRRGASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYDRGCNAISRCRS 118

[Close]

BLAST of Carg07186 vs. NCBI nr
Match: XP_022153599.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAK+SFLLPFC I A LTV ST V A +T+ PSWVLD A A CHGSMA+CMMD+IE++M
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           +SEINRRILA  NYISY+AL+AN VPCSRRGASYYNCQPGAEANPYDRGCSAI RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Carg07186 vs. NCBI nr
Match: XP_011659776.1 (rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41
Identity = 88/118 (74.58%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MA  +SFLLP   + A LTV      ++T K PSWVLD A A CHGSMA+CMM+DIEFQM
Sbjct: 1   MATTVSFLLPIFLLVAILTV------SSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILAD+NYISYDAL+AN VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Carg07186 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-25
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 6   SFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLD-RALATCHGSMADCMMDDIEFQMDSEI 65
           S L+    I AF   F ++  A  +    WV+  R+   C GS+ +C+ ++ EF++DSE 
Sbjct: 5   SGLILCVLIGAF---FISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSES 64

Query: 66  NRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           NRRILA   YISY AL+ N VPCSRRGASYYNC+PGA+ANPY RGCSAI RCRS
Sbjct: 65  NRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Carg07186 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.8e-25
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 44  CHGSMADCMMDDIEFQMDSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEA 103
           CHGS+A+C+  + E +MDSEINRRILA   YISY +L+ N VPCSRRGASYYNCQ GA+A
Sbjct: 47  CHGSIAECIGAE-EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 104 NPYDRGCSAIARCRS 119
           NPY RGCS IARCRS
Sbjct: 107 NPYSRGCSKIARCRS 120

[Close]

BLAST of Carg07186 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 10  PFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMD--DIEFQMDSEINRR 69
           P   I A LTV       T+     +V     + C+G++A+C +   + EF+MDSEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           ILA   YISY ALR N VPCSRRGASYYNC+ GA+ANPY RGCSAI RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Carg07186 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-23
Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 14  IAAFLTVFSTVVLATTTKGPSWVLDRA-----LATCHGSMADCMMDDIEFQMDSEINRRI 73
           + A L +  + V +T   G S    RA      + C GS+A+C+ ++ E + DS+I+RRI
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRI 69

Query: 74  LADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           LA   YISY A+R N VPCSRRGASYYNCQ GA+ANPY RGCS I RCR
Sbjct: 70  LAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Carg07186 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-22
Identity = 53/90 (58.89%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 44  CHGSMADCMMD-------DI---------EFQMDSEINRRILADVNYISYDALRANKVPC 103
           C G++A+C +        D+         EF+MDSEINRRILA   YISY ALR N +PC
Sbjct: 47  CRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPC 106

Query: 104 SRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           SRRGASYYNC+ GA+ANPY RGCSAI RCR
Sbjct: 107 SRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Carg07186 vs. ExPASy TrEMBL
Match: A0A6J1GNW5 (rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAKLSFLLPFCFIAAFLTVFST V ATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Carg07186 vs. ExPASy TrEMBL
Match: A0A6J1DJJ4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAK+SFLLPFC I A LTV ST V A +T+ PSWVLD A A CHGSMA+CMMD+IE++M
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           +SEINRRILA  NYISY+AL+AN VPCSRRGASYYNCQPGAEANPYDRGCSAI RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Carg07186 vs. ExPASy TrEMBL
Match: A0A0A0K607 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 88/118 (74.58%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MA  +SFLLP   + A LTV      ++T K PSWVLD A A CHGSMA+CMM+DIEFQM
Sbjct: 1   MATTVSFLLPIFLLVAILTV------SSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILAD+NYISYDAL+AN VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Carg07186 vs. ExPASy TrEMBL
Match: A0A5A7VLB3 (Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00450 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 91/118 (77.12%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAK+SFLLP   + A LTV ST   ATT   PSWVL  A A CHGSMA+CM +DIEF+M
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSST---ATT---PSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILAD+NYISYDALRAN VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Carg07186 vs. ExPASy TrEMBL
Match: A0A1S3BRF1 (rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 91/118 (77.12%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60
           MAAK+SFLLP   + A LTV ST   ATT   PSWVL  A A CHGSMA+CM +DIEF+M
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSST---ATT---PSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 119
           DSEINRRILAD+NYISYDALRAN VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Carg07186 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 44  CHGSMADCMMDDIEFQMDSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEA 103
           CHGS+A+C+  + E +MDSEINRRILA   YISY +L+ N VPCSRRGASYYNCQ GA+A
Sbjct: 47  CHGSIAECIGAE-EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 104 NPYDRGCSAIARCRS 119
           NPY RGCS IARCRS
Sbjct: 107 NPYSRGCSKIARCRS 120

[Close]

BLAST of Carg07186 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 114.0 bits (284), Expect = 8.2e-26
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 10  PFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMD--DIEFQMDSEINRR 69
           P   I A LTV       T+     +V     + C+G++A+C +   + EF+MDSEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           ILA   YISY ALR N VPCSRRGASYYNC+ GA+ANPY RGCSAI RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Carg07186 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 14  IAAFLTVFSTVVLATTTKGPSWVLDRA-----LATCHGSMADCMMDDIEFQMDSEINRRI 73
           + A L +  + V +T   G S    RA      + C GS+A+C+ ++ E + DS+I+RRI
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRI 69

Query: 74  LADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           LA   YISY A+R N VPCSRRGASYYNCQ GA+ANPY RGCS I RCR
Sbjct: 70  LAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Carg07186 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 105.1 bits (261), Expect = 3.8e-23
Identity = 53/90 (58.89%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 44  CHGSMADCMMD-------DI---------EFQMDSEINRRILADVNYISYDALRANKVPC 103
           C G++A+C +        D+         EF+MDSEINRRILA   YISY ALR N +PC
Sbjct: 47  CRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPC 106

Query: 104 SRRGASYYNCQPGAEANPYDRGCSAIARCR 118
           SRRGASYYNC+ GA+ANPY RGCSAI RCR
Sbjct: 107 SRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Carg07186 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 23  TVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQMDSEINRR-ILADVNYISYDALR 82
           T+ +   +   +W L ++     G + +    ++++ MDSE NRR + A  +YISY ALR
Sbjct: 13  TLAVVAESANATWTLTKSCVNGQGCIGE--DGELDYLMDSETNRRQLAARRSYISYGALR 72

Query: 83  ANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARC 117
            N VPCSRRG SYY+C+    ANPY RGCS I  C
Sbjct: 73  KNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of Carg07186 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014377.1	1.8e-59	100.00	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953165.1	2.6e-58	98.31	rapid alkalinization factor-like [Cucurbita moschata]	[more]
XP_038896330.1	3.0e-46	80.51	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022153599.1	3.3e-45	78.81	protein RALF-like 33 [Momordica charantia]	[more]
XP_011659776.1	2.9e-41	74.58	rapid alkalinization factor [Cucumis sativus]	[more]

BLAST of Carg07186 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945T0	2.3e-25	54.39	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	6.8e-25	72.00	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q8L9P8	1.2e-24	55.45	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9MA62	1.7e-23	52.29	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9LUS7	5.4e-22	58.89	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]

BLAST of Carg07186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNW5	1.3e-58	98.31	rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 P...	[more]
A0A6J1DJJ4	1.6e-45	78.81	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1	[more]
A0A0A0K607	1.4e-41	74.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1	[more]
A0A5A7VLB3	5.4e-41	77.12	Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BRF1	5.4e-41	77.12	rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV...	[more]

BLAST of Carg07186 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02900.1	4.8e-26	72.00	rapid alkalinization factor 1	[more]
AT4G15800.1	8.2e-26	55.45	ralf-like 33	[more]
AT3G05490.1	1.2e-24	52.29	ralf-like 22	[more]
AT3G16570.1	3.8e-23	58.89	rapid alkalinization factor 23	[more]
AT2G33775.1	5.9e-16	43.16	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..117 e-value: 3.1E-28 score: 98.5
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 11..118
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 11..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07186-RA	Carg07186-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region