
Carg07145 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTGTTTCTGTGAGTGTTTACAATGGCTTGAGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCGGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCTGGAGGGAGGCGGAGGCGGCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTGAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGGGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAATTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGTGTTTCTGTGAGTGTTTACAATGGCTTGAGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCGGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCTGGAGGGAGGCGGAGGCGGCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTGAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGGGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAATTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGTGTTTCTGTGAGTGTTTACAATGGCTTGAGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCGGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCTGGAGGGAGGCGGAGGCGGCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTGAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGGGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAATTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCGACGGTGGCGGAATAA MEGVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVAGRSTLKEYDEKMITEIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE Homology
BLAST of Carg07145 vs. NCBI nr
Match: XP_023548775.1 (uncharacterized protein LOC111807331 [Cucurbita pepo subsp. pepo] >KAG7014336.1 hypothetical protein SDJN02_24513, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of Carg07145 vs. NCBI nr
Match: XP_022953808.1 (uncharacterized protein LOC111456226 [Cucurbita moschata]) HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of Carg07145 vs. NCBI nr
Match: XP_022991267.1 (uncharacterized protein LOC111487968 [Cucurbita maxima]) HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75 Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of Carg07145 vs. NCBI nr
Match: KAG6575795.1 (hypothetical protein SDJN03_26434, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Carg07145 vs. NCBI nr
Match: XP_031744261.1 (uncharacterized protein LOC101203703 [Cucumis sativus] >KGN44989.1 hypothetical protein Csa_016672 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62 Identity = 134/155 (86.45%), Postives = 138/155 (89.03%), Query Frame = 0
BLAST of Carg07145 vs. ExPASy TrEMBL
Match: A0A6J1GPC4 (uncharacterized protein LOC111456226 OS=Cucurbita moschata OX=3662 GN=LOC111456226 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.9e-76 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of Carg07145 vs. ExPASy TrEMBL
Match: A0A6J1JLB7 (uncharacterized protein LOC111487968 OS=Cucurbita maxima OX=3661 GN=LOC111487968 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 6.5e-76 Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of Carg07145 vs. ExPASy TrEMBL
Match: A0A0A0K7Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405950 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62 Identity = 134/155 (86.45%), Postives = 138/155 (89.03%), Query Frame = 0
BLAST of Carg07145 vs. ExPASy TrEMBL
Match: A0A5A7TZB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001450 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62 Identity = 134/155 (86.45%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of Carg07145 vs. ExPASy TrEMBL
Match: A0A1S4DZ96 (uncharacterized protein LOC103492779 OS=Cucumis melo OX=3656 GN=LOC103492779 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 133/155 (85.81%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Carg07145 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21 Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0
BLAST of Carg07145 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21 Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0
BLAST of Carg07145 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 3.5e-21 Identity = 61/124 (49.19%), Postives = 78/124 (62.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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