Carg07080 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07080
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LysM domain-containing protein
Location	Carg_Chr17: 7688294 .. 7690692 (-)
RNA-Seq Expression	Carg07080
Synteny	Carg07080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGGAAGGGGAAGTTTTGACGAAAATCGTGATTGCAATCTTCTTCATAGCAACGGTGGTATGAATCGGACGCAAAATAACATGGACATCGATGAACCGAGCTCTACAGATTTGTCGTCGATTTCATTGTTTTCAGGCGTCGGCTACATCGAGCATCCTGTTTCAAAGTACGATACTCTTGCCGGGATTGCCATCAAGTACGGCGTCGAGGTAATTATGCTCTGAGATTGTTTATTGTTGATTTGTTCGTTTCTTTCATGTCTTGCTTTGTTGATTAAAGTTGATCTACATCTGACAATTGGAGGATGCTGTTCACATATTCTGGATTTAAATGCAGAAAGTAATACCTAAAATAAGTAGACTTCAAAATTTAAATTGTTTTACAAAATTTTTGGAAGTATCCGATTTCAATTTATAGTTCTTTTATATAAATTTAAATTTGATAGGATCTTAAACATTTTTTATTTTGTATCTAATAAATAAGTCGATTAAAAAACTATACACTGGAAGAACTTAATTTTCTGCTTCTCATGATTTATCATATCAAGATTACCCTCAACTCCGATCACAATCTATTATATATGTTCTATGCGTTTCGTAACAACATAATTATGTATACATATTAGGTCTCGGACATCAAGAGAATGAACGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGTTCCCTTCCCCTCACTTATCCAAGGATCTTGACATTTCCAGGTTTGTTTTCTCTGGTTTCATACGTGAATAGTGTAAACTGCTTGAGTTTCACAATTAGTGCCAATCTAACGGTAATCGCTCAAGCCAACCCGCTAACAAATATTGTCCAATTTAAAATTTTCATTCTAGGCTTCTCTTCAAGGTTTTAAAACATGTGCGGGAAAGGTCTTACACCCTTATAAAGAATGCTTCTTTCCGTTCTCCAAGATCTCACATTCTCCCTCTAGTACTTGTAAATCTAATCTCTTGATCCCACCTAAAAGTTGATTCTTCTAAAAGTTGATTCTTCTCCTGCCACTCACTCAGGTTGATCTTTGATTACATTTGTCAATTTGAGCATAGTTCAGGTTGATTCTCCACCCCCACCTCAACTACTCATTTTTGCACAATTAGTACCAATCTAATCTGATTTTCGGTAATCGCCGAAACTTACCGCTAGCAAATATTGTCCTCTTTAGACTTTTCATTTCAGGCTTCAAGGATTTTAAAACGTGTGCTAGGGAGAGGTCCCACGCCCTTATAAAAAATGTTTCGTTCACTTCTCCAAGATCTCACGTTCTCCCGCTAGTGGTTGTAAATCTAATCTCTTGATCCCCACTTAAATGTTGATTCTCCTCCTGTCACCCACTCGGGTTGATCCTTGATTACATTTGTCACTCATTTGTCAATTTGAGGATAGTTCAACTTGTAACGGGTCAATAAAAACATAACTTTGGAGTACCCACCACCGAAAACAATTATATAATTAATTAGGTTGCATGATTTTGGTTTGAAGTTAGTTATTTGGTGTGTGGGGGTATTCATATGCATATAATATGCCCCGTAATATCTCTGCTCATGTGTGAGCTTCTACAGGAACAGTAATTGTGAGCGAAATGCAACTCGGTTCATGTCCTTTAATCTGTTGGACTCATTCCAATCACTGAGAATCAAATCCACCAAACTCAAGGCTCCTTCGGAAGCTCATCATGCGAACATTCCAACAACCAGTGAAACCACTGCCTACAGAAAAGGGGAATTCAACCATGGGGGCACTACTACTACTACTACTCATCCCATGCTGGCATCCTCCCATAATCCTCATCAAAACCGCCATAGAAAATCAAGAAGCTTTGCAGATGGTTTTCATTTTGAAAACGTTGAATTCACCGATATAATTTCCGCTCCGTGCGGAGCAATCGACTCGACCAAAGGGAGTGAAAAACTGGTGAGGAGACGCCAGAAATCCATGGCGGACTTCTCCATTGCAGCCGATAGTGTTTTCAACAAGACTTACATCAGCAATGGTGAATGTTTTTCAATGACAACGAAGAACTTGGATGTGAGACTGGATGGGGGTTCAAGAATCAATGCTACATCAAATGGGGTTACTGAAGTGAGTAAATTGACACCTATTTTAACAGATGATGTGGGAGGAGGCTCGTTTATGGGTAGTAATGGGATGATGATTGGTGGAAGAAGATCATCAAGCACATGTAATTTGCAGGACACAGAAAAAGGTAACTCTTCCTCATCCATGTGGTCTACATCTTGGAGTTTGAAAACAGATCTTCAAGCACTCTCAACTGCAATGGTCACTAAGTCGATATTTGATGGGTTGCCAAGGTCAACAACTAGGTACAAAGCTTCAATGGATTGA

mRNA sequence

ATGGAAAAAGGAAGGGGAAGTTTTGACGAAAATCGTGATTGCAATCTTCTTCATAGCAACGGTGGTATGAATCGGACGCAAAATAACATGGACATCGATGAACCGAGCTCTACAGATTTGTCGTCGATTTCATTGTTTTCAGGCGTCGGCTACATCGAGCATCCTGTTTCAAAGTACGATACTCTTGCCGGGATTGCCATCAAGTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAACGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGTTCCCTTCCCCTCACTTATCCAAGGATCTTGACATTTCCAGGAACAGTAATTGTGAGCGAAATGCAACTCGGTTCATGTCCTTTAATCTGTTGGACTCATTCCAATCACTGAGAATCAAATCCACCAAACTCAAGGCTCCTTCGGAAGCTCATCATGCGAACATTCCAACAACCAGTGAAACCACTGCCTACAGAAAAGGGGAATTCAACCATGGGGGCACTACTACTACTACTACTCATCCCATGCTGGCATCCTCCCATAATCCTCATCAAAACCGCCATAGAAAATCAAGAAGCTTTGCAGATGGTTTTCATTTTGAAAACGTTGAATTCACCGATATAATTTCCGCTCCGTGCGGAGCAATCGACTCGACCAAAGGGAGTGAAAAACTGGTGAGGAGACGCCAGAAATCCATGGCGGACTTCTCCATTGCAGCCGATAGTGTTTTCAACAAGACTTACATCAGCAATGGTGAATGTTTTTCAATGACAACGAAGAACTTGGATGTGAGACTGGATGGGGGTTCAAGAATCAATGCTACATCAAATGGGGTTACTGAAGTGAGTAAATTGACACCTATTTTAACAGATGATGTGGGAGGAGGCTCGTTTATGGGTAGTAATGGGATGATGATTGGTGGAAGAAGATCATCAAGCACATGTAATTTGCAGGACACAGAAAAAGGTAACTCTTCCTCATCCATGTGGTCTACATCTTGGAGTTTGAAAACAGATCTTCAAGCACTCTCAACTGCAATGGTCACTAAGTCGATATTTGATGGGTTGCCAAGGTCAACAACTAGGTACAAAGCTTCAATGGATTGA

Coding sequence (CDS)

ATGGAAAAAGGAAGGGGAAGTTTTGACGAAAATCGTGATTGCAATCTTCTTCATAGCAACGGTGGTATGAATCGGACGCAAAATAACATGGACATCGATGAACCGAGCTCTACAGATTTGTCGTCGATTTCATTGTTTTCAGGCGTCGGCTACATCGAGCATCCTGTTTCAAAGTACGATACTCTTGCCGGGATTGCCATCAAGTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAACGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGTTCCCTTCCCCTCACTTATCCAAGGATCTTGACATTTCCAGGAACAGTAATTGTGAGCGAAATGCAACTCGGTTCATGTCCTTTAATCTGTTGGACTCATTCCAATCACTGAGAATCAAATCCACCAAACTCAAGGCTCCTTCGGAAGCTCATCATGCGAACATTCCAACAACCAGTGAAACCACTGCCTACAGAAAAGGGGAATTCAACCATGGGGGCACTACTACTACTACTACTCATCCCATGCTGGCATCCTCCCATAATCCTCATCAAAACCGCCATAGAAAATCAAGAAGCTTTGCAGATGGTTTTCATTTTGAAAACGTTGAATTCACCGATATAATTTCCGCTCCGTGCGGAGCAATCGACTCGACCAAAGGGAGTGAAAAACTGGTGAGGAGACGCCAGAAATCCATGGCGGACTTCTCCATTGCAGCCGATAGTGTTTTCAACAAGACTTACATCAGCAATGGTGAATGTTTTTCAATGACAACGAAGAACTTGGATGTGAGACTGGATGGGGGTTCAAGAATCAATGCTACATCAAATGGGGTTACTGAAGTGAGTAAATTGACACCTATTTTAACAGATGATGTGGGAGGAGGCTCGTTTATGGGTAGTAATGGGATGATGATTGGTGGAAGAAGATCATCAAGCACATGTAATTTGCAGGACACAGAAAAAGGTAACTCTTCCTCATCCATGTGGTCTACATCTTGGAGTTTGAAAACAGATCTTCAAGCACTCTCAACTGCAATGGTCACTAAGTCGATATTTGATGGGTTGCCAAGGTCAACAACTAGGTACAAAGCTTCAATGGATTGA

Protein sequence

MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCERNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTTHPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIFDGLPRSTTRYKASMD

Homology

[Close]

BLAST of Carg07080 vs. NCBI nr
Match: KAG7014272.1 (LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 734.6 bits (1895), Expect = 4.4e-208
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD
Sbjct: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM
Sbjct: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240

Query: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300
           ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV
Sbjct: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300

Query: 301 GGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF 360
           GGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF
Sbjct: 301 GGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF 360

Query: 361 DGLPRSTTRYKASMD 376
           DGLPRSTTRYKASMD
Sbjct: 361 DGLPRSTTRYKASMD 375

[Close]

BLAST of Carg07080 vs. NCBI nr
Match: KAG6575718.1 (LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 729.9 bits (1883), Expect = 1.1e-206
Identity = 375/376 (99.73%), Postives = 375/376 (99.73%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD
Sbjct: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG-TTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG TTTTT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180

Query: 181 THPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKS 240
           THPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKS
Sbjct: 181 THPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKS 240

Query: 241 MADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDD 300
           MADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDD
Sbjct: 241 MADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDD 300

Query: 301 VGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360
           VGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI
Sbjct: 301 VGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360

Query: 361 FDGLPRSTTRYKASMD 376
           FDGLPRSTTRYKASMD
Sbjct: 361 FDGLPRSTTRYKASMD 376

[Close]

BLAST of Carg07080 vs. NCBI nr
Match: XP_022954018.1 (uncharacterized protein LOC111456405 [Cucurbita moschata])

HSP 1 Score: 715.3 bits (1845), Expect = 2.7e-202
Identity = 370/378 (97.88%), Postives = 374/378 (98.94%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVG+IEHPVSKYD
Sbjct: 1   MEKGRGSYDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGFIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMN+LVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNSLVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG-TTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG TTTTT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180

Query: 181 THPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDII--SAPCGAIDSTKGSEKLVRRRQ 240
           THPMLASSHNPHQNRHRKSRSFA+GFHFENVEFTDII  SAP GAIDSTKGSEKLVRRRQ
Sbjct: 181 THPMLASSHNPHQNRHRKSRSFANGFHFENVEFTDIISASAPSGAIDSTKGSEKLVRRRQ 240

Query: 241 KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT 300
           KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT
Sbjct: 241 KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT 300

Query: 301 DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK 360
           DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK
Sbjct: 301 DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK 360

Query: 361 SIFDGLPRSTTRYKASMD 376
           SIFDGLPRSTTRYKASMD
Sbjct: 361 SIFDGLPRSTTRYKASMD 378

[Close]

BLAST of Carg07080 vs. NCBI nr
Match: XP_022991486.1 (uncharacterized protein LOC111488087 isoform X1 [Cucurbita maxima])

HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200
Identity = 367/376 (97.61%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVG+IEHPVSKYD
Sbjct: 1   MEKGRGSYDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGFIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPH SKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHFSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTT TT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTITT 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAP GAIDSTKGSEKLVRRRQKSM
Sbjct: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPYGAIDSTKGSEKLVRRRQKSM 240

Query: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300
           ADFSIAADSV NKTYISNGE FSMTTKNLDVRLD GSRINATSNGVTEVSKLTPILTDDV
Sbjct: 241 ADFSIAADSVLNKTYISNGESFSMTTKNLDVRLDRGSRINATSNGVTEVSKLTPILTDDV 300

Query: 301 GGGSFMG-SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360
           GGGSFMG SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI
Sbjct: 301 GGGSFMGSSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360

Query: 361 FDGLPRSTTRYKASMD 376
           FDGLPRSTTRYKASMD
Sbjct: 361 FDGLPRSTTRYKASMD 376

[Close]

BLAST of Carg07080 vs. NCBI nr
Match: XP_023548136.1 (uncharacterized protein LOC111806863 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679.9 bits (1753), Expect = 1.3e-191
Identity = 354/375 (94.40%), Postives = 359/375 (95.73%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DEN DCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD
Sbjct: 1   MEKGRGSYDENCDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEF+HGGTTTT  
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFDHGGTTTT-- 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
                     HQNRHRKSRSFA+GFHFENVEFTDIISAP GAIDSTKGSEKLVRRRQKSM
Sbjct: 181 ----------HQNRHRKSRSFANGFHFENVEFTDIISAPYGAIDSTKGSEKLVRRRQKSM 240

Query: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300
           ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDG SRINATSNGVTEVSKLTPI TD+V
Sbjct: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGTSRINATSNGVTEVSKLTPISTDNV 300

Query: 301 GGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF 360
           GGGSF+GSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF
Sbjct: 301 GGGSFIGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSIF 360

Query: 361 DGLPRSTTRYKASMD 376
           DGLPRSTTRYKASMD
Sbjct: 361 DGLPRSTTRYKASMD 363

[Close]

BLAST of Carg07080 vs. ExPASy Swiss-Prot
Match: Q3KPL3 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=lysmd2 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 27/51 (52.94%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 51  YIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGK 102
           YIEH +S  DTL GIA+KYGV +  IKR N L +   +F  KSL IP   K
Sbjct: 58  YIEHCLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLNIPVISK 108

[Close]

BLAST of Carg07080 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 41/116 (35.34%), Postives = 53/116 (45.69%), Query Frame = 0


Query: 51  YIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKD 110
           YIEH +S  DTL GIA+KYGV +  IKR N L +   +F  KSL IP   K         
Sbjct: 60  YIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLNIPVISK--------- 119

Query: 111 LDISRNSNCERNATRFMSFNLLDS----FQSLRIKSTKLKAPSEAHHANIPTTSET 163
                        + F     LDS     Q      TK  A +EAH  +IP++++T
Sbjct: 120 -----------KGSLFNGLGSLDSPENETQDNCNSPTKEPALAEAHTVSIPSSAKT 155

[Close]

BLAST of Carg07080 vs. ExPASy Swiss-Prot
Match: Q6DCC7 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Xenopus laevis OX=8355 GN=lysmd4 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 21/46 (45.65%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 52  IEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIP 98
           +E  +++ D L  +A++YG +VSDIKR+N L+TD  ++ALK+++IP
Sbjct: 71  LERAITEDDNLNKLALQYGCKVSDIKRVNNLITDQDIYALKTIKIP 116

[Close]

BLAST of Carg07080 vs. ExPASy Swiss-Prot
Match: A0JNI1 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.0e-05
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 52 IEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIP 98
          +EH ++  DTLAG+A+KYGV +  IKR N L T+  +F  K+L IP
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIP 85

[Close]

BLAST of Carg07080 vs. ExPASy Swiss-Prot
Match: Q1JQA8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Bos taurus OX=9913 GN=LYSMD2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.0e-05
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 51  YIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFP 104
           ++EH V   DTL GIA+KYGV +  IKR N L T+  +F  K+L IP   + P
Sbjct: 71  HVEHRVRAGDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIPVISEKP 123

[Close]

BLAST of Carg07080 vs. ExPASy TrEMBL
Match: A0A6J1GPY6 (uncharacterized protein LOC111456405 OS=Cucurbita moschata OX=3662 GN=LOC111456405 PE=4 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.3e-202
Identity = 370/378 (97.88%), Postives = 374/378 (98.94%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVG+IEHPVSKYD
Sbjct: 1   MEKGRGSYDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGFIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMN+LVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNSLVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG-TTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGG TTTTT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180

Query: 181 THPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDII--SAPCGAIDSTKGSEKLVRRRQ 240
           THPMLASSHNPHQNRHRKSRSFA+GFHFENVEFTDII  SAP GAIDSTKGSEKLVRRRQ
Sbjct: 181 THPMLASSHNPHQNRHRKSRSFANGFHFENVEFTDIISASAPSGAIDSTKGSEKLVRRRQ 240

Query: 241 KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT 300
           KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT
Sbjct: 241 KSMADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILT 300

Query: 301 DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK 360
           DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK
Sbjct: 301 DDVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTK 360

Query: 361 SIFDGLPRSTTRYKASMD 376
           SIFDGLPRSTTRYKASMD
Sbjct: 361 SIFDGLPRSTTRYKASMD 378

[Close]

BLAST of Carg07080 vs. ExPASy TrEMBL
Match: A0A6J1JQV7 (uncharacterized protein LOC111488087 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488087 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 5.6e-201
Identity = 367/376 (97.61%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVG+IEHPVSKYD
Sbjct: 1   MEKGRGSYDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGFIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPH SKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHFSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTT TT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTITT 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAP GAIDSTKGSEKLVRRRQKSM
Sbjct: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPYGAIDSTKGSEKLVRRRQKSM 240

Query: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300
           ADFSIAADSV NKTYISNGE FSMTTKNLDVRLD GSRINATSNGVTEVSKLTPILTDDV
Sbjct: 241 ADFSIAADSVLNKTYISNGESFSMTTKNLDVRLDRGSRINATSNGVTEVSKLTPILTDDV 300

Query: 301 GGGSFMG-SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360
           GGGSFMG SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI
Sbjct: 301 GGGSFMGSSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360

Query: 361 FDGLPRSTTRYKASMD 376
           FDGLPRSTTRYKASMD
Sbjct: 361 FDGLPRSTTRYKASMD 376

[Close]

BLAST of Carg07080 vs. ExPASy TrEMBL
Match: A0A6J1JLY4 (uncharacterized protein LOC111488087 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488087 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.2e-184
Identity = 344/376 (91.49%), Postives = 346/376 (92.02%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS+DENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVG+IEHPVSKYD
Sbjct: 1   MEKGRGSYDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGFIEHPVSKYD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVE                       IPTPGKFPSPH SKDLDISRNSNCE
Sbjct: 61  TLAGIAIKYGVE-----------------------IPTPGKFPSPHFSKDLDISRNSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTT TT
Sbjct: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTITT 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAP GAIDSTKGSEKLVRRRQKSM
Sbjct: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPYGAIDSTKGSEKLVRRRQKSM 240

Query: 241 ADFSIAADSVFNKTYISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDV 300
           ADFSIAADSV NKTYISNGE FSMTTKNLDVRLD GSRINATSNGVTEVSKLTPILTDDV
Sbjct: 241 ADFSIAADSVLNKTYISNGESFSMTTKNLDVRLDRGSRINATSNGVTEVSKLTPILTDDV 300

Query: 301 GGGSFMG-SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 360
           GGGSFMG SNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI
Sbjct: 301 GGGSFMGSSNGMMIGGRRSSSTCNLQDTEKGNSSSSMWSTSWSLKTDLQALSTAMVTKSI 353

Query: 361 FDGLPRSTTRYKASMD 376
           FDGLPRSTTRYKASMD
Sbjct: 361 FDGLPRSTTRYKASMD 353

[Close]

BLAST of Carg07080 vs. ExPASy TrEMBL
Match: A0A1S3CEJ2 (uncharacterized protein LOC103499969 OS=Cucumis melo OX=3656 GN=LOC103499969 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.5e-132
Identity = 269/379 (70.98%), Postives = 306/379 (80.74%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS++ENRD +++ SN G+NRT         SS DL SISL SGVGYIEHPVSK+D
Sbjct: 1   MEKGRGSYEENRDRHIVQSN-GVNRTMKMNGTS--SSEDLWSISLCSGVGYIEHPVSKFD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIK+MNALVTD QMFALKSLQIPTPGK PSP LS+DLDISR SNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKKMNALVTDQQMFALKSLQIPTPGKHPSPLLSEDLDISRKSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           +++TR  SF+LLDSFQSLRIKS+ LK P + H A +P   E T+Y KGEF+H G     +
Sbjct: 121 QDSTRLTSFDLLDSFQSLRIKSSTLKTPKQPHQAIVPGICELTSYGKGEFDHLG-----S 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HP LASSHNPH  RHRKSRSFA+GF  EN+EFTDI++AP GA DS KG EKL RRRQKSM
Sbjct: 181 HPKLASSHNPHGRRHRKSRSFANGFSLENIEFTDIVTAPNGATDSIKGGEKLCRRRQKSM 240

Query: 241 ADFSIAADSVFNKTY-ISNGECFSMTTKNLDVRLDGG-SRINATSNGVTEVSKLTPILTD 300
           ADFS A +S+ NKTY  +NGEC SMT ++LD+RL G   R NA SNGVTE+SKLTP LTD
Sbjct: 241 ADFSTATESISNKTYATNNGECLSMTKRSLDLRLKGALGRTNAASNGVTELSKLTPNLTD 300

Query: 301 DVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGN-SSSSMWSTSWSLKTDLQALSTAMVTK 360
           DVGG S   SN  ++GGRRSSSTCNLQ+ +KGN SSSSMWSTSWSLKTDLQA S+AMVTK
Sbjct: 301 DVGGNSSFMSN-RILGGRRSSSTCNLQEADKGNSSSSSMWSTSWSLKTDLQAFSSAMVTK 360

Query: 361 SIFDGLPRS-TTRYKASMD 376
           SIF+GLPRS +TRYKAS D
Sbjct: 361 SIFEGLPRSGSTRYKASRD 370

[Close]

BLAST of Carg07080 vs. ExPASy TrEMBL
Match: A0A5D3CFU3 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00170 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.5e-132
Identity = 269/379 (70.98%), Postives = 306/379 (80.74%), Query Frame = 0


Query: 1   MEKGRGSFDENRDCNLLHSNGGMNRTQNNMDIDEPSSTDLSSISLFSGVGYIEHPVSKYD 60
           MEKGRGS++ENRD +++ SN G+NRT         SS DL SISL SGVGYIEHPVSK+D
Sbjct: 1   MEKGRGSYEENRDRHIVQSN-GVNRTMKMNGTS--SSEDLWSISLCSGVGYIEHPVSKFD 60

Query: 61  TLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKFPSPHLSKDLDISRNSNCE 120
           TLAGIAIKYGVEVSDIK+MNALVTD QMFALKSLQIPTPGK PSP LS+DLDISR SNCE
Sbjct: 61  TLAGIAIKYGVEVSDIKKMNALVTDQQMFALKSLQIPTPGKHPSPLLSEDLDISRKSNCE 120

Query: 121 RNATRFMSFNLLDSFQSLRIKSTKLKAPSEAHHANIPTTSETTAYRKGEFNHGGTTTTTT 180
           +++TR  SF+LLDSFQSLRIKS+ LK P + H A +P   E T+Y KGEF+H G     +
Sbjct: 121 QDSTRLTSFDLLDSFQSLRIKSSTLKTPKQPHQAIVPGICELTSYGKGEFDHLG-----S 180

Query: 181 HPMLASSHNPHQNRHRKSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSM 240
           HP LASSHNPH  RHRKSRSFA+GF  EN+EFTDI++AP GA DS KG EKL RRRQKSM
Sbjct: 181 HPKLASSHNPHGRRHRKSRSFANGFSLENIEFTDIVTAPNGATDSIKGGEKLCRRRQKSM 240

Query: 241 ADFSIAADSVFNKTY-ISNGECFSMTTKNLDVRLDGG-SRINATSNGVTEVSKLTPILTD 300
           ADFS A +S+ NKTY  +NGEC SMT ++LD+RL G   R NA SNGVTE+SKLTP LTD
Sbjct: 241 ADFSTATESISNKTYATNNGECLSMTKRSLDLRLKGALGRTNAASNGVTELSKLTPNLTD 300

Query: 301 DVGGGSFMGSNGMMIGGRRSSSTCNLQDTEKGN-SSSSMWSTSWSLKTDLQALSTAMVTK 360
           DVGG S   SN  ++GGRRSSSTCNLQ+ +KGN SSSSMWSTSWSLKTDLQA S+AMVTK
Sbjct: 301 DVGGNSSFMSN-RILGGRRSSSTCNLQEADKGNSSSSSMWSTSWSLKTDLQAFSSAMVTK 360

Query: 361 SIFDGLPRS-TTRYKASMD 376
           SIF+GLPRS +TRYKAS D
Sbjct: 361 SIFEGLPRSGSTRYKASRD 370

[Close]

BLAST of Carg07080 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-39
Identity = 141/354 (39.83%), Postives = 185/354 (52.26%), Query Frame = 0


Query: 50  GYIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKF-PSPHLS 109
           GYIEH +SK+DTLAG+AIKYGVEV+D+K+MN LVTD QMFALKSLQIP PG+  PSP LS
Sbjct: 76  GYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPLPGRHPPSPCLS 135

Query: 110 K-DLDISRNSNC-ERNATRFMSFNLLDSFQSLRIKSTKLK-APS----EAHHANIPTTSE 169
              L+     +C E  +       + DSFQSLR+KS++ K +P+    + ++   P  ++
Sbjct: 136 NGSLNHGEGCSCHEPESPNHSEQEVFDSFQSLRLKSSEKKVSPAMYSLQGYYGLKP--AD 195

Query: 170 TTAYRKGEFNHGGTTTTTTHPMLAS----------SHNPHQNRHRKSRSFADGFHFENVE 229
            T    G F  G   T T+H +  +          S N   N HRKSRS        N  
Sbjct: 196 RTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLV------NAL 255

Query: 230 FTDIISAPCGAIDSTKGSEKLVRRRQKSMADFSIAADSVFNK--TYISNGECFSMTTKNL 289
             ++  +P         S+K +RRRQKS ADFS     +  K     SNG   S+  K L
Sbjct: 256 IEEVNQSPDNNTQEPT-SDKFMRRRQKSEADFSSRTPELVLKEENGSSNGGFLSIAGKGL 315

Query: 290 DVRLDGGSRINATSNGVTEVSKLTPI---LTDDVGGGSFMGSNGMMIGGRRSSSTCNLQD 349
            +R    SR N  +   +E     P+   L D     SF          R+SSS  +LQD
Sbjct: 316 ALRSKASSRTNLAAE--SENGNFNPVSMNLMDAPVSDSFSSV-------RKSSSASSLQD 375

Query: 350 TE--KGNSSSSMWSTS-WSLKTDLQALSTAMVTKSIFDGLPRSTT--RYKASMD 376
            +    N S S+W TS WSLK DL  L+ A +T SIFDGLP+  T  R K ++D
Sbjct: 376 PDGNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTGRRNKTALD 409

[Close]

BLAST of Carg07080 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-33
Identity = 134/364 (36.81%), Postives = 191/364 (52.47%), Query Frame = 0


Query: 32  IDEPSSTDLSSISLFSGVGYIEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFAL 91
           I  P+S+  SS S  +  GYIEH VSK+DTLAGIAIKYGVEV+DI ++N LVTD QMFAL
Sbjct: 52  ITPPTSSPPSSAS--TCAGYIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFAL 111

Query: 92  KSLQIPTPGKF-PSPHLSKDLDISRNSNCERNATRFMS----FNLLDSFQSLRIKSTKLK 151
           +SL+IP PG+  PSP LS    ++   +    A+   S     ++ DSFQSLR+  ++ K
Sbjct: 112 ESLRIPLPGRHPPSPCLSNG-SLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKK 171

Query: 152 -APS----EAHHANIPTTSETT-----AYRKGEFNHGGTTTTTTHPMLASSHNPHQNRHR 211
            +P+    + ++   P     +     A  K E +          P  A+S     + HR
Sbjct: 172 ISPAMNSLQGYYGLKPKNRRASEGFGMAVYKNEASQLQDNDQYLTPFPATS--TPLSHHR 231

Query: 212 KSRSFADGFHFENVEFTDIISAPCGAIDSTKGSEKLVRRRQKSMADFSIAADSVFNK--T 271
           KSRS  D    E  +  +   A  G ++ST   +K +RRRQKS ADFS  A  +  K   
Sbjct: 232 KSRSLVDAVIAEVNQSPNPSKAGGGEVNST---DKPMRRRQKSEADFSSRAPELLLKEEN 291

Query: 272 YISNGECFSMTTKNLDVRLDGGSRINATSNGVTEVSKLTPILTDDVGGGSFMGSNGMMIG 331
             S+G   ++  KNL +R    SR N ++     ++ +   L D   G SF         
Sbjct: 292 RSSSGAFSAIAGKNLALRSKASSRANLSAE-TRHLNSIPINLMDAPVGDSFSSV------ 351

Query: 332 GRRSSSTCNLQDTEKGNSSSSMWSTS-WSLKTDLQALSTAMVTKSIFDGLPRSTT--RYK 376
            R+S S  +LQ+    ++ SS+W TS W+LK +L  L+   +  SIFDGLP+  T  R K
Sbjct: 352 -RKSVSASSLQEPNCNSNGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNK 397

[Close]

BLAST of Carg07080 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 52  IEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIP 98
           I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIP 119

[Close]

BLAST of Carg07080 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 52  IEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIP 98
           I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIP 119

[Close]

BLAST of Carg07080 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 52  IEHPVSKYDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIP 98
           I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIP 119

The following BLAST results are available for this feature:

BLAST of Carg07080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014272.1	4.4e-208	100.00	LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cu...	[more]
KAG6575718.1	1.1e-206	99.73	LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cu...	[more]
XP_022954018.1	2.7e-202	97.88	uncharacterized protein LOC111456405 [Cucurbita moschata]	[more]
XP_022991486.1	1.2e-200	97.61	uncharacterized protein LOC111488087 isoform X1 [Cucurbita maxima]	[more]
XP_023548136.1	1.3e-191	94.40	uncharacterized protein LOC111806863 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3KPL3	1.7e-05	52.94	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus l...	[more]
Q3B7I8	1.7e-05	35.34	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
Q6DCC7	3.8e-05	45.65	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Xenopus l...	[more]
A0JNI1	5.0e-05	50.00	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos tauru...	[more]
Q1JQA8	5.0e-05	47.17	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Bos tauru...	[more]

BLAST of Carg07080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPY6	1.3e-202	97.88	uncharacterized protein LOC111456405 OS=Cucurbita moschata OX=3662 GN=LOC1114564...	[more]
A0A6J1JQV7	5.6e-201	97.61	uncharacterized protein LOC111488087 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JLY4	6.2e-184	91.49	uncharacterized protein LOC111488087 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CEJ2	5.5e-132	70.98	uncharacterized protein LOC103499969 OS=Cucumis melo OX=3656 GN=LOC103499969 PE=...	[more]
A0A5D3CFU3	5.5e-132	70.98	Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucu...	[more]

BLAST of Carg07080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08200.1	3.2e-39	39.83	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	3.4e-33	36.81	Peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.1	1.1e-04	39.13	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	1.1e-04	39.13	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	1.1e-04	39.13	peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 53..97 e-value: 2.7E-4 score: 30.3
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 52..96 score: 12.355825
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 52..96 e-value: 3.87156E-6 score: 41.3169
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 47..102 e-value: 4.4E-13 score: 50.5
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 52..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..189
None	No IPR available	PANTHER	PTHR20932:SF36	PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN	coord: 34..375
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 34..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07080-RA	Carg07080-RA	mRNA