Carg06947 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06947
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	phytoene synthase 2, chloroplastic-like
Location	Carg_Chr20: 142459 .. 143869 (+)
RNA-Seq Expression	Carg06947
Synteny	Carg06947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCTTCTATTTCCCTTGCGCTAAACCCTCGTATAGTCATTGGAGAATGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAGAGGCAATCTCGGGCCAACCATTCTTCCCAACCATGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGGTAAGGGGAAAACAAATCACATTTTTGAAGCGAACCCATTTCGGAAAGCCCACGAAAGTGAGGAGTAAGTTTTGAGTTTTTGTTGGTGCAGTTTGGTGTAGGAGAACGGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGGTGCAGTGAGCTGAGAGAAGCTTTCCTGTTTTTTGTGTGTGTCTTGCTGGCTTGGGCTCATACTTGTTGTGCGTGTTTGTTTTGTTTTCTGAAAGCAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGCTATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAAGCTATTCTTTTTCTTTCTATATCTATTACTTCTATTGTTCATGCAACTAAATATTGCGTTTTGAACTTGTTTCAGTGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGCGACAACGATATATTGTCGATGAGAGTAACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGTCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

mRNA sequence

ATGACTTCTTCTATTTCCCTTGCGCTAAACCCTCGTATAGTCATTGGAGAATGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAGAGGCAATCTCGGGCCAACCATTCTTCCCAACCATGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACGGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGCTATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGCGACAACGATATATTGTCGATGAGAGTAACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGTCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

Coding sequence (CDS)

ATGACTTCTTCTATTTCCCTTGCGCTAAACCCTCGTATAGTCATTGGAGAATGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAGAGGCAATCTCGGGCCAACCATTCTTCCCAACCATGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACGGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGCTATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGCGACAACGATATATTGTCGATGAGAGTAACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGTCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

Protein sequence

MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPSLLFH

Homology

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BLAST of Carg06947 vs. NCBI nr
Match: KAG7010227.1 (Phytoene synthase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 773.9 bits (1997), Expect = 6.6e-220
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLLFH
Sbjct: 361 LLTLPLAYTKAISAPSLLFH 380

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BLAST of Carg06947 vs. NCBI nr
Match: XP_022943564.1 (phytoene synthase 2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 762.7 bits (1968), Expect = 1.5e-216
Identity = 374/380 (98.42%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISL  NPRIVIGECEGKRSRVRV MSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLTPNPRIVIGECEGKRSRVRVTMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIVERQSRANHSSQPC TLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVERQSRANHSSQPCNTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYD+FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDTFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDK SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLLFH
Sbjct: 361 LLTLPLAYTKAISAPSLLFH 380

[Close]

BLAST of Carg06947 vs. NCBI nr
Match: XP_022986176.1 (phytoene synthase 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 760.8 bits (1963), Expect = 5.8e-216
Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISL  NPRIVIG+CEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQF LCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDK SRWP+WSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLL H
Sbjct: 361 LLTLPLAYTKAISAPSLLIH 380

[Close]

BLAST of Carg06947 vs. NCBI nr
Match: XP_023513201.1 (phytoene synthase 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 757.7 bits (1955), Expect = 4.9e-215
Identity = 373/380 (98.16%), Postives = 374/380 (98.42%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISL  NPRIVIGEC+GKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLTPNPRIVIGECKGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIV RQSRANHSSQP KTL LHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVARQSRANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDK SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLLFH
Sbjct: 361 LLTLPLAYTKAISAPSLLFH 380

[Close]

BLAST of Carg06947 vs. NCBI nr
Match: XP_038901205.1 (phytoene synthase 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 665.2 bits (1715), Expect = 3.3e-187
Identity = 325/382 (85.08%), Postives = 352/382 (92.15%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S I +   P   IGEC+GK    +  VIMS+GGVIAAP S QTLKFPTLSKQGIPLAD
Sbjct: 1   MNSCICITPKPLTFIGECKGKVFPKQFTVIMSKGGVIAAPKSSQTLKFPTLSKQGIPLAD 60

Query: 61  LHVDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           L+VDEIVERQS++NH     K +Q HPSFLEEAYESCRKICAEYA+TFYLGTLLMTKERQ
Sbjct: 61  LNVDEIVERQSQSNHF---LKKMQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMTKERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           RAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTVSKF
Sbjct: 121 RAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTVSKF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           P+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSL +QT
Sbjct: 181 PIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLPTQT 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFM 300
           IY+A++HLGIGNQLTNILRDVGEDA RGRVYLPQDELAQFGLCD+DIL+MRVT+KWREF+
Sbjct: 241 IYSAAIHLGIGNQLTNILRDVGEDATRGRVYLPQDELAQFGLCDDDILTMRVTNKWREFI 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQIKRARFYFK AEKGASQLDK+SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV RS
Sbjct: 301 KEQIKRARFYFKLAEKGASQLDKASRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVRRS 360

Query: 361 KKLLTLPLAYTKAISAPSLLFH 381
           KKLLTLP AYTKAISAPSL+FH
Sbjct: 361 KKLLTLPHAYTKAISAPSLVFH 379

[Close]

BLAST of Carg06947 vs. ExPASy Swiss-Prot
Match: P08196 (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-124
Identity = 216/348 (62.07%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQ--PCKTLQLHPSFL 90
           R  ++A P+  +T+     S+Q +    L    +V+RQ R+ +  +  P   +  +   L
Sbjct: 62  RSAILATPSGERTM----TSEQMVYDVVLRQAALVKRQLRSTNELEVKPDIPIPGNLGLL 121

Query: 91  EEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVL 150
            EAY+ C ++CAEYA+TF LGT+LMT ER+RAIWAIYVWCRRTDELVDGPNA+Y+ P  L
Sbjct: 122 SEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPAAL 181

Query: 151 DRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELY 210
           DRWE RL+D+F G P+D+LD ALS TVS FP+D++PF+DMIEGMRMD RK RY +F+ELY
Sbjct: 182 DRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKNFDELY 241

Query: 211 LYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRV 270
           LYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A+L LGI NQLTNILRDVGEDA RGRV
Sbjct: 242 LYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRV 301

Query: 271 YLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSRWPVW 330
           YLPQDELAQ GL D DI + RVTDKWR FMK+QI RAR +F +AEKG ++L  +SR+PVW
Sbjct: 302 YLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSASRFPVW 361

Query: 331 SSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPS 377
           +SL+LYRKIL+ IE NDYNNFTKRAYV +SKKL+ LP+AY K++  P+
Sbjct: 362 ASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAKSLVPPT 405

[Close]

BLAST of Carg06947 vs. ExPASy Swiss-Prot
Match: P37272 (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 GN=PSY1 PE=1 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.4e-124
Identity = 213/344 (61.92%), Postives = 271/344 (78.78%), Query Frame = 0


Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQPCKTLQLHPS--FL 90
           R  ++A P    T+     S++ +    L    +V+RQ R+       K + +  +   L
Sbjct: 74  RSAIVATPAGEMTMS----SERMVYDVVLRQAALVKRQLRSTDELDVKKDIPIPGTLGLL 133

Query: 91  EEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVL 150
            EAY+ C ++CAEYA+TFYLGT+LMT ER++AIWAIYVWCRRTDELVDGPNA+++ P  L
Sbjct: 134 SEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAAL 193

Query: 151 DRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELY 210
           DRWE+RL+D+F G P+D+LDAALS TVSKFP+D++PF+DMIEGMRMD RK RY +F+ELY
Sbjct: 194 DRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELY 253

Query: 211 LYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRV 270
           LYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A+L LGI NQLTNILRDVGEDA RGRV
Sbjct: 254 LYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRV 313

Query: 271 YLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSRWPVW 330
           YLPQDELAQ GL D DI + RVTDKWR FMK+QI+RAR +F +AEKG ++L  +SRWPV 
Sbjct: 314 YLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWPVL 373

Query: 331 SSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAI 373
           +SL+LYR+IL+ IE NDYNNFTKRAYV + KKL+ LP+AY K++
Sbjct: 374 ASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSL 413

[Close]

BLAST of Carg06947 vs. ExPASy Swiss-Prot
Match: P49293 (Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-123
Identity = 205/292 (70.21%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNP 145
           S L EAY+ C ++CAEYA+TFYLGT+LMT ERQ+AIWAIYVWCRRTDELVDGPNA+++ P
Sbjct: 131 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 190

Query: 146 EVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFE 205
             LDRWE RL+++F+G P+D+LDAAL+ TV+KFP+D++PFKDMIEGMRMD RK RY +F+
Sbjct: 191 TALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFD 250

Query: 206 ELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQL-TNILRDVGEDAL 265
           ELYLYCYYVAGTVGLMSVPVMGIAP+S  S++++Y A+L LGI NQ   NILRDVGEDA 
Sbjct: 251 ELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDAR 310

Query: 266 RGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSR 325
           RGR+YLPQDELAQ GL D DI + RVTDKWR FMK QIKRAR +F +AEKG  +L+K+SR
Sbjct: 311 RGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASR 370

Query: 326 WPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPS 377
           WPVW+SL+LYR+IL+ IE NDY+NFTKRAYV ++KK+L LP+AY +A+  PS
Sbjct: 371 WPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

[Close]

BLAST of Carg06947 vs. ExPASy Swiss-Prot
Match: Q5Z5B7 (Phytoene synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSY1 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-123
Identity = 202/297 (68.01%), Postives = 255/297 (85.86%), Query Frame = 0


Query: 79  KTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGP 138
           K L L  + L++AY  C +IC EYA+TFYLGT+LMT++R+RAIWAIYVWCRRTDELVDGP
Sbjct: 116 KDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGP 175

Query: 139 NAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRK 198
           NA+++ P  LDRWE+RL D+F G PYD+LDAALS T+SKFP+D++PF+DMIEGMR D RK
Sbjct: 176 NASHITPSALDRWEKRLDDLFTGRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRK 235

Query: 199 CRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRD 258
            RY +F+ELY+YCYYVAGTVGLMSVPVMGIAP+S  +++++Y+A+L LGI NQLTNILRD
Sbjct: 236 TRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRD 295

Query: 259 VGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQ 318
           VGEDA RGR+YLPQDELA+ GL D DI +  VT+KWR FMK QIKRAR +F++AE+G ++
Sbjct: 296 VGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFEEAERGVTE 355

Query: 319 LDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAP 376
           L ++SRWPVW+SL+LYR+IL+ IE NDYNNFTKRAYVG++KKLL LP+AY +++  P
Sbjct: 356 LSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLALPVAYGRSLLMP 412

[Close]

BLAST of Carg06947 vs. ExPASy Swiss-Prot
Match: P49085 (Phytoene synthase 1, chloroplastic OS=Zea mays OX=4577 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 443.0 bits (1138), Expect = 3.5e-123
Identity = 205/315 (65.08%), Postives = 261/315 (82.86%), Query Frame = 0


Query: 64  IVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWA 123
           +++RQ R        + + +  + L+EAY+ C +IC EYA+TFYLGT+LMT+ER+RAIWA
Sbjct: 91  LLKRQLRTPVLDARPQDMDMPRNGLKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWA 150

Query: 124 IYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMK 183
           IYVWCRRTDELVDGPNA Y+ P  LDRWE+RL+D+F G PYD+LDAALS T+S+FP+D++
Sbjct: 151 IYVWCRRTDELVDGPNANYITPTALDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQ 210

Query: 184 PFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTAS 243
           PF+DMIEGMR D RK RY++F+ELY+YCYYVAGTVGLMSVPVMGIA +S  +++++Y+A+
Sbjct: 211 PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAA 270

Query: 244 LHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIK 303
           L LGI NQLTNILRDVGEDA RGR+YLPQDELAQ GL D DI    VT++WR FMK QIK
Sbjct: 271 LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 330

Query: 304 RARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLT 363
           RAR +F++AE+G ++L ++SRWPVW+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KKLL 
Sbjct: 331 RARMFFEEAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLA 390

Query: 364 LPLAYTKAISAPSLL 379
           LP+AY K++  P  L
Sbjct: 391 LPVAYGKSLLLPCSL 405

[Close]

BLAST of Carg06947 vs. ExPASy TrEMBL
Match: A0A6J1FUQ1 (phytoene synthase 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448297 PE=3 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 7.4e-217
Identity = 374/380 (98.42%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISL  NPRIVIGECEGKRSRVRV MSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLTPNPRIVIGECEGKRSRVRVTMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIVERQSRANHSSQPC TLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVERQSRANHSSQPCNTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYD+FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDTFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDK SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLLFH
Sbjct: 361 LLTLPLAYTKAISAPSLLFH 380

[Close]

BLAST of Carg06947 vs. ExPASy TrEMBL
Match: A0A6J1JAD4 (phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483996 PE=3 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 2.8e-216
Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           MTSSISL  NPRIVIG+CEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH
Sbjct: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA
Sbjct: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY
Sbjct: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKE 300
           TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQF LCDNDILSMRVTDKWREFMKE
Sbjct: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QIKRARFYFKQAEKGASQLDK SRWP+WSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK
Sbjct: 301 QIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360

Query: 361 LLTLPLAYTKAISAPSLLFH 381
           LLTLPLAYTKAISAPSLL H
Sbjct: 361 LLTLPLAYTKAISAPSLLIH 380

[Close]

BLAST of Carg06947 vs. ExPASy TrEMBL
Match: A0A1L5JHW5 (Phytoene synthase 2 OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.4e-185
Identity = 326/382 (85.34%), Postives = 348/382 (91.10%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+ SIS+A  P I IGE +GK    R  +IM+R GVIAAP SPQTL FPTLSKQGIPLAD
Sbjct: 1   MSCSISVAAKPCIFIGEGKGKLFPKRSTLIMNRAGVIAAPKSPQTLDFPTLSKQGIPLAD 60

Query: 61  LHVDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           LHV+EIVERQS+ NH S      + HP FLEEAYESCRKICAEYA+TFYLGTLLMTKERQ
Sbjct: 61  LHVEEIVERQSQGNHFSDEESCKKFHPWFLEEAYESCRKICAEYAKTFYLGTLLMTKERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           RAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERLQDIFEG PYDVLDAALSHTVSKF
Sbjct: 121 RAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLQDIFEGRPYDVLDAALSHTVSKF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           P+ MKPF+DMIEGMRMDTRK RYD+FEELYLYCYYVAGTVGLMSVPVMGIAPDS LS+QT
Sbjct: 181 PIHMKPFRDMIEGMRMDTRKSRYDNFEELYLYCYYVAGTVGLMSVPVMGIAPDSLLSTQT 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFM 300
           IY+A+LHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGL D+DILSMRVTDKWREFM
Sbjct: 241 IYSAALHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLRDDDILSMRVTDKWREFM 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQIKRARFYFK AE+GASQLDK+SRWPVWSSLMLYRKIL+AIEENDY+NFTKRAYVGRS
Sbjct: 301 KEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYRKILDAIEENDYDNFTKRAYVGRS 360

Query: 361 KKLLTLPLAYTKAISAPSLLFH 381
           KKLL LPLAYTKAIS PSL+FH
Sbjct: 361 KKLLMLPLAYTKAISGPSLVFH 382

[Close]

BLAST of Carg06947 vs. ExPASy TrEMBL
Match: A0A6J1DHQ7 (phytoene synthase 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021202 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.7e-185
Identity = 326/387 (84.24%), Postives = 354/387 (91.47%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGKR---SRVRVIMSRGGVIAAPTSP--QTLKFPTLSKQGIP 60
           M+SS SLA NPRI IG+ +G +    R  +IMSR  VIA P S   + L FPTLSKQGIP
Sbjct: 1   MSSSFSLAPNPRI-IGDRKGTKFLPRRSTLIMSRADVIAEPKSKNFRRLNFPTLSKQGIP 60

Query: 61  LADLHVDEIVERQSRANHSS--QPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLM 120
           LADLHV+EIV+RQS+AN  S    CK L+LHPSFLE+AYESCR+ICAEYA+TFYLGTLLM
Sbjct: 61  LADLHVEEIVQRQSQANPFSGEDSCKELRLHPSFLEKAYESCRRICAEYAKTFYLGTLLM 120

Query: 121 TKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSH 180
           TKERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERLQDIFEGCPYD+LDAALSH
Sbjct: 121 TKERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLQDIFEGCPYDLLDAALSH 180

Query: 181 TVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSS 240
           TVSKFP+ MKPF+DMIEGMRMDTRKCRYD+FEELYLYCYYVAGTVGLMSVPVMGIAPDS 
Sbjct: 181 TVSKFPIHMKPFRDMIEGMRMDTRKCRYDNFEELYLYCYYVAGTVGLMSVPVMGIAPDSP 240

Query: 241 LSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDK 300
           L +QT+Y+A+LHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCD+DILSMRVTDK
Sbjct: 241 LPTQTVYSAALHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDDDILSMRVTDK 300

Query: 301 WREFMKEQIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRA 360
           WREFMKEQ+KRARFYFK AEKGASQLDK+SRWPVWSSLMLYRKIL+AIEENDY+NFTKRA
Sbjct: 301 WREFMKEQLKRARFYFKLAEKGASQLDKASRWPVWSSLMLYRKILDAIEENDYDNFTKRA 360

Query: 361 YVGRSKKLLTLPLAYTKAISAPSLLFH 381
           YVGRSKKLLTLPLAYTKAISAP L+FH
Sbjct: 361 YVGRSKKLLTLPLAYTKAISAPRLVFH 386

[Close]

BLAST of Carg06947 vs. ExPASy TrEMBL
Match: A0A0A0KZ43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280510 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 9.7e-177
Identity = 306/385 (79.48%), Postives = 342/385 (88.83%), Query Frame = 0


Query: 1   MTSSISLALNPRIVIGECEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +   P + IGEC+GK    R ++I + GGV AAP S +TLKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 61  LHVDEIVERQSRANH--SSQPCK-TLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIVERQS  NH    + CK  ++   SFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEGCKRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWR 300
           + T+Y+A+LHLGIGNQLTNILRDVGEDA+RGRVYLPQDEL QFGLCD DIL MRV+D+WR
Sbjct: 241 THTVYSAALHLGIGNQLTNILRDVGEDAMRGRVYLPQDELTQFGLCDEDILRMRVSDEWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK+SRWPVWSSLMLYR+ILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYREILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLFH 381
           GRSKK L LPLAYTK+IS P+L+F+
Sbjct: 361 GRSKKFLALPLAYTKSISPPTLVFN 385

[Close]

BLAST of Carg06947 vs. TAIR 10
Match: AT5G17230.1 (PHYTOENE SYNTHASE )

HSP 1 Score: 438.0 bits (1125), Expect = 8.0e-123
Identity = 199/287 (69.34%), Postives = 246/287 (85.71%), Query Frame = 0


Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNP 145
           S L EAY+ C ++CAEYA+TFYLGTLLMT ER++AIWAIYVWCRRTDELVDGPNA+++ P
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 146 EVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFE 205
             LDRWE RL+D+F G P+D+LDAAL+ TV+++P+D++PF+DMIEGMRMD +K RY +F+
Sbjct: 186 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 245

Query: 206 ELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALR 265
           +LYLYCYYVAGTVGLMSVPVMGI P S  +++++Y A+L LGI NQLTNILRDVGEDA R
Sbjct: 246 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARR 305

Query: 266 GRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSRW 325
           GRVYLPQDELAQ GL D DI + +VTDKWR FMK Q+KRAR +F +AEKG ++L  +SRW
Sbjct: 306 GRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRW 365

Query: 326 PVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAI 373
           PVW+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KK+  LPLAY K++
Sbjct: 366 PVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSV 412

[Close]

BLAST of Carg06947 vs. TAIR 10
Match: AT5G17230.2 (PHYTOENE SYNTHASE )

HSP 1 Score: 438.0 bits (1125), Expect = 8.0e-123
Identity = 199/287 (69.34%), Postives = 246/287 (85.71%), Query Frame = 0


Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNP 145
           S L EAY+ C ++CAEYA+TFYLGTLLMT ER++AIWAIYVWCRRTDELVDGPNA+++ P
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 146 EVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFE 205
             LDRWE RL+D+F G P+D+LDAAL+ TV+++P+D++PF+DMIEGMRMD +K RY +F+
Sbjct: 186 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 245

Query: 206 ELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALR 265
           +LYLYCYYVAGTVGLMSVPVMGI P S  +++++Y A+L LGI NQLTNILRDVGEDA R
Sbjct: 246 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARR 305

Query: 266 GRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKSSRW 325
           GRVYLPQDELAQ GL D DI + +VTDKWR FMK Q+KRAR +F +AEKG ++L  +SRW
Sbjct: 306 GRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRW 365

Query: 326 PVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAI 373
           PVW+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KK+  LPLAY K++
Sbjct: 366 PVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSV 412

[Close]

BLAST of Carg06947 vs. TAIR 10
Match: AT5G17230.3 (PHYTOENE SYNTHASE )

HSP 1 Score: 427.9 bits (1099), Expect = 8.3e-120
Identity = 199/302 (65.89%), Postives = 246/302 (81.46%), Query Frame = 0


Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIY---------------VWCRR 145
           S L EAY+ C ++CAEYA+TFYLGTLLMT ER++AIWAIY               VWCRR
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 185

Query: 146 TDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIE 205
           TDELVDGPNA+++ P  LDRWE RL+D+F G P+D+LDAAL+ TV+++P+D++PF+DMIE
Sbjct: 186 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIE 245

Query: 206 GMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGN 265
           GMRMD +K RY +F++LYLYCYYVAGTVGLMSVPVMGI P S  +++++Y A+L LGI N
Sbjct: 246 GMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIAN 305

Query: 266 QLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFK 325
           QLTNILRDVGEDA RGRVYLPQDELAQ GL D DI + +VTDKWR FMK Q+KRAR +F 
Sbjct: 306 QLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFD 365

Query: 326 QAEKGASQLDKSSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTK 373
           +AEKG ++L  +SRWPVW+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KK+  LPLAY K
Sbjct: 366 EAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 425

The following BLAST results are available for this feature:

BLAST of Carg06947 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010227.1	6.6e-220	100.00	Phytoene synthase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022943564.1	1.5e-216	98.42	phytoene synthase 2, chloroplastic-like [Cucurbita moschata]	[more]
XP_022986176.1	5.8e-216	98.16	phytoene synthase 2, chloroplastic-like [Cucurbita maxima]	[more]
XP_023513201.1	4.9e-215	98.16	phytoene synthase 2, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_038901205.1	3.3e-187	85.08	phytoene synthase 2, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Carg06947 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08196	1.1e-124	62.07	Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSY1 PE=1 ...	[more]
P37272	5.4e-124	61.92	Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 ...	[more]
P49293	1.6e-123	70.21	Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]
Q5Z5B7	2.0e-123	68.01	Phytoene synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
P49085	3.5e-123	65.08	Phytoene synthase 1, chloroplastic OS=Zea mays OX=4577 GN=PSY1 PE=1 SV=2	[more]

BLAST of Carg06947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUQ1	7.4e-217	98.42	phytoene synthase 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JAD4	2.8e-216	98.16	phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]
A0A1L5JHW5	7.4e-185	85.34	Phytoene synthase 2 OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1DHQ7	9.7e-185	84.24	phytoene synthase 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KZ43	9.7e-177	79.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280510 PE=3 SV=1	[more]

BLAST of Carg06947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17230.1	8.0e-123	69.34	PHYTOENE SYNTHASE	[more]
AT5G17230.2	8.0e-123	69.34	PHYTOENE SYNTHASE	[more]
AT5G17230.3	8.3e-120	65.89	PHYTOENE SYNTHASE	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 102..357 e-value: 2.8E-67 score: 227.0
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 84..366 e-value: 3.9E-89 score: 300.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 91..372
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	SFLD	SFLDG01212	Phytoene_synthase_like	coord: 89..371 e-value: 0.0 score: 315.8
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	PANTHER	PTHR31480	BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE	coord: 2..379
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 89..371 e-value: 0.0 score: 315.8
None	No IPR available	PANTHER	PTHR31480:SF9	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 2..379
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 246..271
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 210..225
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 93..360 e-value: 3.65827E-101 score: 298.38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06947-RA	Carg06947-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups