Carg06707 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06707
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionENDO3c domain-containing protein
LocationCarg_Chr18: 774140 .. 776459 (+)
RNA-Seq ExpressionCarg06707
SyntenyCarg06707
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACTCGGCGTGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAGAAACCAGAGCCAAATGGCGATTCTCCCGCGAATGGACCTCGAGCAAAATCAATCAGAACTGTTAATGGCTTCGATTGCTCAACTAATGAACCGTATCCGGCTTATTCTTCGCCCACTTCTGACGAATGTTTGTCCGTACGAGACGATCTGTTGAATCTCCATGGTTTTCCTCGAGAGTTTGTGAAGTATCGGAAGGAGAGAGAGAGGTTGAGCGAGTGCTGCTCCGTCGTGGACGGCAGTGGTGGTGAGTTAGCGGAAAATGTGAAATCGGAGAGCGTTCTGGATGGGTTAGTGAAGACAGTGCTATCGCAAAACACTACGGAGACTAATTCTGAGAAGGCTTTTGCTTCTCTCAAGTCTGCTTTTGCTGCCTGGGAAGATGTGAGTCTTCTTCGTTTTTTTTTGAATGGCTTAATTTGCTTATTATTGGATTGTACTGTCGATTTCTTTTTGCAACGAAGGATTTAGGAAATGAAACTGATGCTCGTAGTTATTGTTCAGTGAAGTATTGCTAGATATCTGCTAATTCATCTGTATTGTCAATGCTACCTTTTGAAAAATTTGACTATCATTTTCGAGATGAACAACTGATTGAAATGAAGCTTGTCATGTTGCTGGACCATAAGTTTTACTAGTTTTGTTTGTGTTATCAGTTATGATTCTAATGAAAGGCCTCAAATCTTTTCTGTTTTCTGATCATATCAAACTAATCTTTCATAGTATATCTTGCTTACAGTTTAAAGGAAAAATTGATATATCCTATGGATAATGTGATTGATTATTGGAGTTCTATTGGTTTTCCTGAAACCTTGGAGGTTTTGATTTGATGAACTCAAATTTTACTGTAGGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACTCACAAAAGCCTCTTGCATTAAGAACATATTGAGTTCTTTGTCAAAGAGAAGAGGCAAATTATGCCTGGAATACTTGCACAATTTGTCCATCGATGAAGTAAAGGCTGAACTGTCCACCTTCAAAGGAATTGGTCCCAAAACGGTATTGTTTGAATGAACAAGCCTTCATAGCCTAATTTTAGTTTCATTTCTAGATCTTGGTGTGCATGGAGCTATACCTTAACTCAACTCTATCTATTGGGATCCTAGTTTAAGGCTTCTACGGAAGAGTCTTTATTCTAATCATGTCTGTTGTGGCTATCTCTGGCTTGTTTAAGGCGTCATAGTTTATAAACAGGGTCGCGTCGGTTTGCTTCTTGATTGCTTAGTGTTATGGATGAATTGAATCATGATATCTCTAACTTGTTCAAGGCATCATAGTTTATAGACCAGGTCGCGTCGGTTTGCATCTTGATTGCTTAGTGTTATGGATGGTTTGCATCTTGATTGCTTAGTGTTACGGATGAATTGAATCATGCTATCTCTGGCTTGTTTAAGGCATCATAGTTTATAAACCAGGTCGAGTCGGTTTGCATCTTGATTGCTTAGTGTTACAGATGAATTGAATCATGCTATCTCTAGCTTGTTTAAGGCATCATAGTTTATAAACCAGGTTGAGTCGGTTTGCATCTTGATTGCTTAGTGTTACGGATGAATTGAATCATGCTATCTCTGGCTCGTGTAAGGCATCATAGTTTATAAACCAGGTCGCGTCGGTTTGCATCTTGATTGCTTAGTTAACCGATGAATTGAATCGATCATACAAGTTATATTTGACAGGTAGCCTGTGTATTGATGTTCAATCTTCAGAAAGACGACTTTCCAGTAGACACCCATGTGAGTACCATATAATTGAATTCTGATTTCTGATGAGTTAGTGATCCCTTTTCTTCAAGACCATTGAAAGATTTTGATTCCTCAACATGTTTGCAGGTCTTCGAGATTGCGAAATTCATCGGTTGGGTCCCAGACGAGGCAGACAGGAACAAAACATATCTTCATCTCAACCAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTACACTCATGGCAAGCTCTGTTCGAAATGTTCGAAGAGAACAGGCGGCCGACAGCGAAAGGTATCCGAAAATCAGCCTTGTCCCTTGTTGAAGTACTCCAAGAACCTTTAAATTTGTAATGTAAATGTTTTCACAATAGTGTATATATATGACAAGCTTCTAATCCTTTTATCATCCCGTTTGCCCCCACAAAGTAGAAAATGACATGCTACAATGTCTGCATTTTGGGATGCTTTTTCTGCTAGTAAATTGATTTGACTATGTTGGGTGATA

mRNA sequence

TCACTCGGCGTGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAGAAACCAGAGCCAAATGGCGATTCTCCCGCGAATGGACCTCGAGCAAAATCAATCAGAACTGTTAATGGCTTCGATTGCTCAACTAATGAACCGTATCCGGCTTATTCTTCGCCCACTTCTGACGAATGTTTGTCCGTACGAGACGATCTGTTGAATCTCCATGGTTTTCCTCGAGAGTTTGTGAAGTATCGGAAGGAGAGAGAGAGGTTGAGCGAGTGCTGCTCCGTCGTGGACGGCAGTGGTGGTGAGTTAGCGGAAAATGTGAAATCGGAGAGCGTTCTGGATGGGTTAGTGAAGACAGTGCTATCGCAAAACACTACGGAGACTAATTCTGAGAAGGCTTTTGCTTCTCTCAAGTCTGCTTTTGCTGCCTGGGAAGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACTCACAAAAGCCTCTTGCATTAAGAACATATTGAGTTCTTTGTCAAAGAGAAGAGGCAAATTATGCCTGGAATACTTGCACAATTTGTCCATCGATGAAGTAAAGGCTGAACTGTCCACCTTCAAAGGAATTGGTCCCAAAACGGTAGCCTGTGTATTGATGTTCAATCTTCAGAAAGACGACTTTCCAGTAGACACCCATGTCTTCGAGATTGCGAAATTCATCGGTTGGGTCCCAGACGAGGCAGACAGGAACAAAACATATCTTCATCTCAACCAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTACACTCATGGCAAGCTCTGTTCGAAATGTTCGAAGAGAACAGGCGGCCGACAGCGAAAGGTATCCGAAAATCAGCCTTGTCCCTTGTTGAAGTACTCCAAGAACCTTTAAATTTGTAATGTAAATGTTTTCACAATAGTGTATATATATGACAAGCTTCTAATCCTTTTATCATCCCGTTTGCCCCCACAAAGTAGAAAATGACATGCTACAATGTCTGCATTTTGGGATGCTTTTTCTGCTAGTAAATTGATTTGACTATGTTGGGTGATA

Coding sequence (CDS)

ATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAGAAACCAGAGCCAAATGGCGATTCTCCCGCGAATGGACCTCGAGCAAAATCAATCAGAACTGTTAATGGCTTCGATTGCTCAACTAATGAACCGTATCCGGCTTATTCTTCGCCCACTTCTGACGAATGTTTGTCCGTACGAGACGATCTGTTGAATCTCCATGGTTTTCCTCGAGAGTTTGTGAAGTATCGGAAGGAGAGAGAGAGGTTGAGCGAGTGCTGCTCCGTCGTGGACGGCAGTGGTGGTGAGTTAGCGGAAAATGTGAAATCGGAGAGCGTTCTGGATGGGTTAGTGAAGACAGTGCTATCGCAAAACACTACGGAGACTAATTCTGAGAAGGCTTTTGCTTCTCTCAAGTCTGCTTTTGCTGCCTGGGAAGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACTCACAAAAGCCTCTTGCATTAAGAACATATTGAGTTCTTTGTCAAAGAGAAGAGGCAAATTATGCCTGGAATACTTGCACAATTTGTCCATCGATGAAGTAAAGGCTGAACTGTCCACCTTCAAAGGAATTGGTCCCAAAACGGTAGCCTGTGTATTGATGTTCAATCTTCAGAAAGACGACTTTCCAGTAGACACCCATGTCTTCGAGATTGCGAAATTCATCGGTTGGGTCCCAGACGAGGCAGACAGGAACAAAACATATCTTCATCTCAACCAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTACACTCATGGCAAGCTCTGTTCGAAATGTTCGAAGAGAACAGGCGGCCGACAGCGAAAGGTATCCGAAAATCAGCCTTGTCCCTTGTTGAAGTACTCCAAGAACCTTTAA

Protein sequence

MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRDDLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKNL
Homology
[Close]
BLAST of Carg06707 vs. NCBI nr
Match: KAG7012228.1 (putative DNA glycosylase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 610.9 bits (1574), Expect = 5.9e-171
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
Sbjct: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
           TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC
Sbjct: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN 300

Query: 301 L 302
           L
Sbjct: 301 L 301

[Close]
BLAST of Carg06707 vs. NCBI nr
Match: XP_022954941.1 (putative DNA glycosylase At3g47830 [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 6.7e-167
Identity = 295/301 (98.01%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFD STNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDSSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNL+GFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
Sbjct: 61  DLLNLYGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
            NSEKAFASLKSAFA WEDVLSAESKCIEDAIRCGGLALTK SCIKNILSSLSKRRGKLC
Sbjct: 121 ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLALTKTSCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYS N
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSTN 300

Query: 301 L 302
           L
Sbjct: 301 L 301

[Close]
BLAST of Carg06707 vs. NCBI nr
Match: XP_023541273.1 (putative DNA glycosylase At3g47830 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 593.2 bits (1528), Expect = 1.3e-165
Identity = 293/301 (97.34%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEPNGDSPANGPRAKSIRTVNGF+CST+EPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPNGDSPANGPRAKSIRTVNGFNCSTSEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
Sbjct: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
            NSEKAFASLKSAFA WEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC
Sbjct: 121 ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLH+LSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHHLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKV ENQ CPLLKYSKN
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVPENQSCPLLKYSKN 300

Query: 301 L 302
           L
Sbjct: 301 L 301

[Close]
BLAST of Carg06707 vs. NCBI nr
Match: XP_022994647.1 (putative DNA glycosylase At3g47830 [Cucurbita maxima])

HSP 1 Score: 582.8 bits (1501), Expect = 1.7e-162
Identity = 291/302 (96.36%), Postives = 294/302 (97.35%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP+GDS +NGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNLHGFPREFV YRKERERLSECCSVVDGSGGELAENVKSESVLDGLV+TVLSQNTTE
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVRTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
            NSEKAFASLKSAFA WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSKRRGKLC
Sbjct: 121 ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRT-GGRQRKVSENQPCPLLKYSK 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRT GGRQRKVSENQ CPLLKYSK
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGRQRKVSENQSCPLLKYSK 300

Query: 301 NL 302
           NL
Sbjct: 301 NL 302

[Close]
BLAST of Carg06707 vs. NCBI nr
Match: KAG6573038.1 (putative DNA glycosylase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578.6 bits (1490), Expect = 3.2e-161
Identity = 286/287 (99.65%), Postives = 286/287 (99.65%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
Sbjct: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
           TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC
Sbjct: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVS 288
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRK S
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKKS 287

[Close]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match: F4JCQ3 (Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.4e-90
Identity = 173/294 (58.84%), Postives = 209/294 (71.09%), Query Frame = 0 

Query: 7   KKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRDDLLNLH 66
           K++RL K +    +PAN    KS  TV+G       PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNKYDGESKTPAN----KS--TVDG-----GNPYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFVKYRKERERLSECCSVVD---GSGGELAENVKSESVLDGLVKTVLSQNTTETNS 126
           GFP EF  YR++R R        D       E     + ESVLDGLVK +LSQNTTE+NS
Sbjct: 66  GFPPEFANYRRQRLRSFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTESNS 125

Query: 127 EKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEY 186
           ++AFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKNIL+ L   RG+LCLEY
Sbjct: 126 QRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLCLEY 185

Query: 187 LHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRN 246
           L  LS++EVK ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVFEIAK +GWVP  ADRN
Sbjct: 186 LRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPKTADRN 245

Query: 247 KTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKY 298
           KTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     + KV+    CPL+ +
Sbjct: 246 KTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPLVGF 288

[Close]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match: C7IW64 (Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 9.5e-15
Identity = 64/207 (30.92%), Postives = 98/207 (47.34%), Query Frame = 0 

Query: 51   TSDECLSVRDDLLNLHGFPREFVKYRKERERLSECCSVVDGSGGE---LAENVKSESVLD 110
            +S+ C + + +   LHG     ++  K+ ++ S     VDGS  +   +    K     D
Sbjct: 1346 SSNLCQNQKANSEVLHGVSSNLIENSKDDKKTSPKVP-VDGSKAKRPRVGAGKKKTYDWD 1405

Query: 111  GLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKN 170
             L K VL  +  +  S+ A  S+      WE +  AE K I D IR  G+    A  IK+
Sbjct: 1406 MLRKEVLYSHGNKERSQNAKDSID-----WETIRQAEVKEISDTIRERGMNNMLAERIKD 1465

Query: 171  ILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF 230
             L+ L +  G + LE+L  +  D+ K  L + +G+G K+V CV +  L    FPVDT+V 
Sbjct: 1466 FLNRLVRDHGSIDLEWLRYVDSDKAKDYLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVG 1525

Query: 231  EIAKFIGWVPDEADRNKTYLHLNQRIP 255
             I   +GWVP +       LHL +  P
Sbjct: 1526 RICVRLGWVPLQPLPESLQLHLLEMYP 1546

[Close]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match: Q9SJQ6 (DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 137  WEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAEL 196
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+L ++  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 197  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             +F G+G K+V CV +  L    FPVDT+V  IA  +GWVP +       LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match: B8YIE8 (Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 6.4e-11
Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0 

Query: 137  WEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAEL 196
            WE V  A+ + I  AIR  G+    A  I+  L+ L    G + LE+L ++  D  K  L
Sbjct: 1339 WEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDHGSIDLEWLRDVPPDSAKDYL 1398

Query: 197  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             + +G+G K+V CV +  L    FPVDT+V  I   +GWVP +       LHL +  P
Sbjct: 1399 LSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWVPIQPLPESLQLHLLELYP 1456

[Close]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match: Q8LK56 (Transcriptional activator DEMETER OS=Arabidopsis thaliana OX=3702 GN=DME PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 0 

Query: 94   GELAENVKSESVLDGLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIR 153
            G LA+  K  S  D L K V      +  ++    S+      +E +  A    I +AI+
Sbjct: 1438 GTLADGKKPTSQWDSLRKDVEGNEGRQERNKNNMDSID-----YEAIRRASISEISEAIK 1497

Query: 154  CGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMF 213
              G+    A  IK+ L  + K  G + LE+L     D+ K  L + +G+G K+V CV + 
Sbjct: 1498 ERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYLLSIRGLGLKSVECVRLL 1557

Query: 214  NLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             L    FPVDT+V  IA  +GWVP +       LHL +  P
Sbjct: 1558 TLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1593

[Close]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match: A0A6J1GSC0 (putative DNA glycosylase At3g47830 OS=Cucurbita moschata OX=3662 GN=LOC111457049 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.2e-167
Identity = 295/301 (98.01%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFD STNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDSSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNL+GFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
Sbjct: 61  DLLNLYGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
            NSEKAFASLKSAFA WEDVLSAESKCIEDAIRCGGLALTK SCIKNILSSLSKRRGKLC
Sbjct: 121 ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLALTKTSCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSKN 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYS N
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKYSTN 300

Query: 301 L 302
           L
Sbjct: 301 L 301

[Close]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match: A0A6J1JWG0 (putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.3e-163
Identity = 291/302 (96.36%), Postives = 294/302 (97.35%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP+GDS +NGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE 120
           DLLNLHGFPREFV YRKERERLSECCSVVDGSGGELAENVKSESVLDGLV+TVLSQNTTE
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVRTVLSQNTTE 120

Query: 121 TNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC 180
            NSEKAFASLKSAFA WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSKRRGKLC
Sbjct: 121 ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 180

Query: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240
           LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
Sbjct: 181 LEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA 240

Query: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRT-GGRQRKVSENQPCPLLKYSK 300
           DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRT GGRQRKVSENQ CPLLKYSK
Sbjct: 241 DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGRQRKVSENQSCPLLKYSK 300

Query: 301 NL 302
           NL
Sbjct: 301 NL 302

[Close]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match: A0A0A0LTF1 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.0e-146
Identity = 261/306 (85.29%), Postives = 281/306 (91.83%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS ++GP+ KSIRTVNGF+CST +PYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVKTVL 120
           DLLNLHGFPREF+KYRKERERLSECCSVVDG   E  +NV+S      ESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSK 180
           SQNTTE NSE+AFASLKSAFAAWEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240
           RRGKLCLE+L +LSIDE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPL 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG RQR+ SE Q CPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300

[Close]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match: A0A5D3BJ43 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003430 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.9e-145
Identity = 258/306 (84.31%), Postives = 277/306 (90.52%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS ++ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVKTVL 120
           DLLNLHGFPREF+KYRKERERLSECCS VDG   E  +NV+S      ESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSK 180
           SQNTTE NSE+AF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPL 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG RQR  SE Q CPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

[Close]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match: A0A1S3AW45 (putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.9e-145
Identity = 258/306 (84.31%), Postives = 277/306 (90.52%), Query Frame = 0 

Query: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS ++ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVKTVL 120
           DLLNLHGFPREF+KYRKERERLSECCS VDG   E  +NV+S      ESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSK 180
           SQNTTE NSE+AF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPL 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG RQR  SE Q CPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

[Close]
BLAST of Carg06707 vs. TAIR 10
Match: AT3G47830.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.7e-91
Identity = 173/294 (58.84%), Postives = 209/294 (71.09%), Query Frame = 0 

Query: 7   KKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRDDLLNLH 66
           K++RL K +    +PAN    KS  TV+G       PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNKYDGESKTPAN----KS--TVDG-----GNPYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFVKYRKERERLSECCSVVD---GSGGELAENVKSESVLDGLVKTVLSQNTTETNS 126
           GFP EF  YR++R R        D       E     + ESVLDGLVK +LSQNTTE+NS
Sbjct: 66  GFPPEFANYRRQRLRSFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTESNS 125

Query: 127 EKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEY 186
           ++AFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKNIL+ L   RG+LCLEY
Sbjct: 126 QRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLCLEY 185

Query: 187 LHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRN 246
           L  LS++EVK ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVFEIAK +GWVP  ADRN
Sbjct: 186 LRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPKTADRN 245

Query: 247 KTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPLLKY 298
           KTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     + KV+    CPL+ +
Sbjct: 246 KTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPLVGF 288

[Close]
BLAST of Carg06707 vs. TAIR 10
Match: AT2G36490.1 (demeter-like 1 )

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-13
Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 137  WEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAEL 196
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+L ++  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 197  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             +F G+G K+V CV +  L    FPVDT+V  IA  +GWVP +       LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]
BLAST of Carg06707 vs. TAIR 10
Match: AT5G04560.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-11
Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 0 

Query: 94   GELAENVKSESVLDGLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIR 153
            G LA+  K  S  D L K V      +  ++    S+      +E +  A    I +AI+
Sbjct: 1180 GTLADGKKPTSQWDSLRKDVEGNEGRQERNKNNMDSID-----YEAIRRASISEISEAIK 1239

Query: 154  CGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMF 213
              G+    A  IK+ L  + K  G + LE+L     D+ K  L + +G+G K+V CV + 
Sbjct: 1240 ERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYLLSIRGLGLKSVECVRLL 1299

Query: 214  NLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             L    FPVDT+V  IA  +GWVP +       LHL +  P
Sbjct: 1300 TLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1335

[Close]
BLAST of Carg06707 vs. TAIR 10
Match: AT5G04560.2 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-11
Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 0 

Query: 94   GELAENVKSESVLDGLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIR 153
            G LA+  K  S  D L K V      +  ++    S+      +E +  A    I +AI+
Sbjct: 1438 GTLADGKKPTSQWDSLRKDVEGNEGRQERNKNNMDSID-----YEAIRRASISEISEAIK 1497

Query: 154  CGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMF 213
              G+    A  IK+ L  + K  G + LE+L     D+ K  L + +G+G K+V CV + 
Sbjct: 1498 ERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYLLSIRGLGLKSVECVRLL 1557

Query: 214  NLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
             L    FPVDT+V  IA  +GWVP +       LHL +  P
Sbjct: 1558 TLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1593

[Close]
BLAST of Carg06707 vs. TAIR 10
Match: AT3G10010.1 (demeter-like 2 )

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-11
Identity = 48/161 (29.81%), Postives = 81/161 (50.31%), Query Frame = 0 

Query: 95  ELAENVKSESV-LDGLVKTVLSQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIR 154
           E A++ + +SV  D L K   S       +E+   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTVD-----WDALRCTDVHKIANIII 838

Query: 155 CGGLALTKASCIKNILSSLSKRRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMF 214
             G+    A  IK  L+ L K+ G + LE+L ++  D+ K  L +  G+G K+V CV + 
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLL 898

Query: 215 NLQKDDFPVDTHVFEIAKFIGWVPDEADRNKTYLHLNQRIP 255
           +L +  FPVDT+V  IA  +GWVP +   ++  +HL +  P
Sbjct: 899 SLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

The following BLAST results are available for this feature:
BLAST of Carg06707 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012228.15.9e-171100.00putative DNA glycosylase [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022954941.16.7e-16798.01putative DNA glycosylase At3g47830 [Cucurbita moschata][more]
XP_023541273.11.3e-16597.34putative DNA glycosylase At3g47830 [Cucurbita pepo subsp. pepo][more]
XP_022994647.11.7e-16296.36putative DNA glycosylase At3g47830 [Cucurbita maxima][more]
KAG6573038.13.2e-16199.65putative DNA glycosylase, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Carg06707 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JCQ32.4e-9058.84Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 ... [more]
C7IW649.5e-1530.92Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2[more]
Q9SJQ61.3e-1133.90DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2[more]
B8YIE86.4e-1135.59Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2[more]
Q8LK561.4e-1031.68Transcriptional activator DEMETER OS=Arabidopsis thaliana OX=3702 GN=DME PE=1 SV... [more]
BLAST of Carg06707 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GSC03.2e-16798.01putative DNA glycosylase At3g47830 OS=Cucurbita moschata OX=3662 GN=LOC111457049... [more]
A0A6J1JWG08.3e-16396.36putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 P... [more]
A0A0A0LTF17.0e-14685.29ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4... [more]
A0A5D3BJ435.9e-14584.31Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3AW455.9e-14584.31putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 ... [more]
BLAST of Carg06707 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47830.11.7e-9158.84DNA glycosylase superfamily protein [more]
AT2G36490.19.1e-1333.90demeter-like 1 [more]
AT5G04560.11.0e-1131.68HhH-GPD base excision DNA repair family protein [more]
AT5G04560.21.0e-1131.68HhH-GPD base excision DNA repair family protein [more]
AT3G10010.12.9e-1129.81demeter-like 2 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 114..271
e-value: 4.1E-16
score: 69.5
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 110..253
e-value: 1.4E-8
score: 35.1
IPR003265HhH-GPD domainCDDcd00056ENDO3ccoord: 109..269
e-value: 7.91706E-26
score: 98.4678
IPR023170Helix-hairpin-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 222..272
e-value: 6.3E-37
score: 129.4
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 101..221
e-value: 6.3E-37
score: 129.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR47203FAMILY NOT NAMEDcoord: 14..299
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 101..278

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06707-RACarg06707-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
molecular_function GO:0019104 DNA N-glycosylase activity
molecular_function GO:0003824 catalytic activity