Carg06467 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06467
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor TINY-like
Location	Carg_Chr14: 10096742 .. 10097344 (-)
RNA-Seq Expression	Carg06467
Synteny	Carg06467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAACCAAACAATTGGAATTCGGAATCTGACGGTACAGAATTGAAAAGGGGAAATCAGAGGGATCAGAAGCACCCAATTTACAGAGGCGTACGGAAAAGGAGTTGGGGCAAATGGGTATCGGAGATCCGTCAGCCCAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACCACGGCGGAGATGGCGGCGCGTGCCCATGACGTGGCGGCACTCAGTATCAAAGGCGATTCGGCTAAGGCTATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCTCGTCCGGTGTCGTTAATGCCGAGGGATATTCAGGCGGCGGCTGCCAAGGCTGCAGCGATGGTTGATTTTGATACTACGACGACGGCGTCGTTTTCGTCGTCGAATTATGAAGGAGGGTCGGATGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGATATCAGAGCTGAGACGTGGAGCGAGTTTGAGTTTATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGTGGCGGCGGAAATGGATTTCTGTCCGTTGTTTGCTGATCAGAGTACCACCACTTCGGCTACCTTCAATGCCGGCGATTGGGAGTGA

mRNA sequence

ATGGCGGAACCAAACAATTGGAATTCGGAATCTGACGGTACAGAATTGAAAAGGGGAAATCAGAGGGATCAGAAGCACCCAATTTACAGAGGCGTACGGAAAAGGAGTTGGGGCAAATGGGTATCGGAGATCCGTCAGCCCAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACCACGGCGGAGATGGCGGCGCGTGCCCATGACGTGGCGGCACTCAGTATCAAAGGCGATTCGGCTAAGGCTATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCTCGTCCGGTGTCGTTAATGCCGAGGGATATTCAGGCGGCGGCTGCCAAGGCTGCAGCGATGGTTGATTTTGATACTACGACGACGGCGTCGTTTTCGTCGTCGAATTATGAAGGAGGGTCGGATGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGATATCAGAGCTGAGACGTGGAGCGAGTTTGAGTTTATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGTGGCGGCGGAAATGGATTTCTGTCCGTTGTTTGCTGATCAGAGTACCACCACTTCGGCTACCTTCAATGCCGGCGATTGGGAGTGA

Coding sequence (CDS)

ATGGCGGAACCAAACAATTGGAATTCGGAATCTGACGGTACAGAATTGAAAAGGGGAAATCAGAGGGATCAGAAGCACCCAATTTACAGAGGCGTACGGAAAAGGAGTTGGGGCAAATGGGTATCGGAGATCCGTCAGCCCAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACCACGGCGGAGATGGCGGCGCGTGCCCATGACGTGGCGGCACTCAGTATCAAAGGCGATTCGGCTAAGGCTATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCTCGTCCGGTGTCGTTAATGCCGAGGGATATTCAGGCGGCGGCTGCCAAGGCTGCAGCGATGGTTGATTTTGATACTACGACGACGGCGTCGTTTTCGTCGTCGAATTATGAAGGAGGGTCGGATGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGATATCAGAGCTGAGACGTGGAGCGAGTTTGAGTTTATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGTGGCGGCGGAAATGGATTTCTGTCCGTTGTTTGCTGATCAGAGTACCACCACTTCGGCTACCTTCAATGCCGGCGATTGGGAGTGA

Protein sequence

MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFCPLFADQSTTTSATFNAGDWE

Homology

[Close]

BLAST of Carg06467 vs. NCBI nr
Match: KAG6581880.1 (Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018316.1 Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.1 bits (1037), Expect = 7.2e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
           TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFNAGDWE
Sbjct: 181 PLFADQSTTTSATFNAGDWE 200

[Close]

BLAST of Carg06467 vs. NCBI nr
Match: XP_022955991.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
           TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFN GDWE
Sbjct: 181 PLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Carg06467 vs. NCBI nr
Match: XP_023528290.1 (ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
            TASFSSSNYEGGSDELGEIVELPNIEEDIRAE+WSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 RTASFSSSNYEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFN GDWE
Sbjct: 181 PLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Carg06467 vs. NCBI nr
Match: XP_022979607.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 5.7e-106
Identity = 195/200 (97.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDG E+KRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGAEMKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
           TTASFSSSN EGGSDELGEIVELPNIEEDIRAE+WSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 TTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFN GDWE
Sbjct: 181 PLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Carg06467 vs. NCBI nr
Match: XP_038906604.1 (ethylene-responsive transcription factor TINY-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 6.4e-89
Identity = 173/205 (84.39%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSES+ TE+KRG      QRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL
Sbjct: 32  MAEPNNWNSESENTEIKRGKQGDQEQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 91

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 92  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQKAAAKAAAMV 151

Query: 121 DFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAA 180
           DFD + T S SSSN + GSDELGEIVELPNIE DIRAE+W+EFEFIDSVDWWGNPPF A 
Sbjct: 152 DFD-SATVSLSSSNDDEGSDELGEIVELPNIEGDIRAESWNEFEFIDSVDWWGNPPFAAG 211

Query: 181 EMDFCPLFADQSTTTSATFNAGDWE 201
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 212 EMDFCAVFSDQS-TPPVTFDGGDWE 234

[Close]

BLAST of Carg06467 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 101/173 (58.38%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 15  ELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALS 74
           E K+  +   KHP+YRGVRKR+WGKWVSEIR+PRKKSRIWLGTF + EMAARAHDVAALS
Sbjct: 22  EKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALS 81

Query: 75  IKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM---VDFDTTTTASFSSSNYE 134
           IKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M     F ++++ +FSSS   
Sbjct: 82  IKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSS 141

Query: 135 G-----------GSDELGEIVELPNI--EEDIRAETWSEFEFIDSVDWWGNPP 172
                       GS+ELGEIVELP++    D   +  +EF F DS D W  PP
Sbjct: 142 SSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSADLWPYPP 192

[Close]

BLAST of Carg06467 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-39
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 9   SESDGTELKRGNQRDQ-KHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARA 68
           S+++ +E K    RD  KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGTF T EMAARA
Sbjct: 30  SKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARA 89

Query: 69  HDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM---VDFDTTTTAS 128
           HDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M     F ++T++S
Sbjct: 90  HDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSS 149

Query: 129 FSSSNYEG-------------GSDELGEIVELPNI--EEDI-RAETWSEFEFIDSVDWWG 172
            S S+                 S+ELGEIVELP++    D+  A   +EF F DSVD+  
Sbjct: 150 SSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYCL 209

[Close]

BLAST of Carg06467 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.7e-37
Identity = 95/177 (53.67%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 21  QRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSA 80
           + + K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SIKG S 
Sbjct: 11  KENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTS- 70

Query: 81  KAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTTT------------------- 140
            AILNFP+L+ LLPRPVSL PRD++AAA KAA M DFDTT                    
Sbjct: 71  -AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMSES 130

Query: 141 -----TASFSSSNYEG--------GSDELGEIVELPNIEEDIRAETWSEFEFIDSVD 166
                T SFSSS++           SD+L EIV+LP++   +     +EF   DS++
Sbjct: 131 SESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDSLE 182

[Close]

BLAST of Carg06467 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-36
Identity = 100/193 (51.81%), Postives = 119/193 (61.66%), Query Frame = 0


Query: 2   AEPNNWNSESDGTE-LKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 61
           A P N N+     +     +    +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLGTF T
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVT 92

Query: 62  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV----- 121
           A+MAARAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV     
Sbjct: 93  ADMAARAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKL 152

Query: 122 -DFDTTTTASFSS-SNYEGGSDE----LGEIVELPNIEE---DIRAETWSEFEFIDSVDW 180
            + D    A  SS S+Y     E    L +IVELPNIEE   D    + ++  + +  D 
Sbjct: 153 LEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDC 212

[Close]

BLAST of Carg06467 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 21  QRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSA 80
           +R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMAARAHD AAL+IKG S 
Sbjct: 35  KRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTS- 94

Query: 81  KAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM-------------------------- 140
            A+LNFP+LA  LPRP S  PRD+QAAAA AAAM                          
Sbjct: 95  -AVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLS 154

Query: 141 -VDFDTTTTASFSSSNYEGGS--DELGEIVELPNIEEDIRAETWSEFEFIDS 164
              + T T++S S S+ E  S  +EL EIVELP++E     E+ SEF ++DS
Sbjct: 155 SSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDS 203

[Close]

BLAST of Carg06467 vs. ExPASy TrEMBL
Match: A0A6J1GVC4 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111457824 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
           TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFN GDWE
Sbjct: 181 PLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Carg06467 vs. ExPASy TrEMBL
Match: A0A6J1IP61 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111479284 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106
Identity = 195/200 (97.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNNWNSESDG E+KRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNWNSESDGAEMKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
           AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT
Sbjct: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
           TTASFSSSN EGGSDELGEIVELPNIEEDIRAE+WSEFEFIDSVDWWGNPPFVAAEMDFC
Sbjct: 121 TTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAAEMDFC 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
           PLFADQSTTTSATFN GDWE
Sbjct: 181 PLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Carg06467 vs. ExPASy TrEMBL
Match: A0A5D3C9I7 (Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00580 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 170/205 (82.93%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  E+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAA 180
           DFD+ T    S SN E GSDELGEIVELPNIEEDIRAE+W+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDSETV---SFSNGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180

Query: 181 EMDFCPLFADQSTTTSATFNAGDWE 201
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 201

[Close]

BLAST of Carg06467 vs. ExPASy TrEMBL
Match: A0A1S3BHN5 (ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC103489964 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 170/205 (82.93%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  E+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAA 180
           DFD+ T    S SN E GSDELGEIVELPNIEEDIRAE+W+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDSETV---SFSNGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180

Query: 181 EMDFCPLFADQSTTTSATFNAGDWE 201
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 201

[Close]

BLAST of Carg06467 vs. ExPASy TrEMBL
Match: A0A6J1GBC8 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111452624 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.7e-76
Identity = 155/200 (77.50%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 1   MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60
           MAEPNN N ES+ TE+KRGN   +KH IYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT
Sbjct: 1   MAEPNNSNLESESTEIKRGN---RKHQIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 60

Query: 61  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTT 120
            EMAARAHDVA LSIKGDSAK ILNFPQLAGLLPRPVSLMP DIQAAAAKAAAMVDFD+T
Sbjct: 61  PEMAARAHDVALLSIKGDSAKPILNFPQLAGLLPRPVSLMPTDIQAAAAKAAAMVDFDST 120

Query: 121 TTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFC 180
              + SSSN E GSDELGEIVELPNIEE+I AE+ ++FE +DSVDWWGNPP+ AAE DF 
Sbjct: 121 VPTT-SSSNDEEGSDELGEIVELPNIEEEISAESLNKFELVDSVDWWGNPPYTAAETDFF 180

Query: 181 PLFADQSTTTSATFNAGDWE 201
             F+DQ  T    F+ GDWE
Sbjct: 181 AGFSDQ-CTIPVIFDGGDWE 195

[Close]

BLAST of Carg06467 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 101/173 (58.38%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 15  ELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALS 74
           E K+  +   KHP+YRGVRKR+WGKWVSEIR+PRKKSRIWLGTF + EMAARAHDVAALS
Sbjct: 22  EKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALS 81

Query: 75  IKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM---VDFDTTTTASFSSSNYE 134
           IKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M     F ++++ +FSSS   
Sbjct: 82  IKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSS 141

Query: 135 G-----------GSDELGEIVELPNI--EEDIRAETWSEFEFIDSVDWWGNPP 172
                       GS+ELGEIVELP++    D   +  +EF F DS D W  PP
Sbjct: 142 SSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSADLWPYPP 192

[Close]

BLAST of Carg06467 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 9   SESDGTELKRGNQRDQ-KHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARA 68
           S+++ +E K    RD  KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGTF T EMAARA
Sbjct: 30  SKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARA 89

Query: 69  HDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM---VDFDTTTTAS 128
           HDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M     F ++T++S
Sbjct: 90  HDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSS 149

Query: 129 FSSSNYEG-------------GSDELGEIVELPNI--EEDI-RAETWSEFEFIDSVDWWG 172
            S S+                 S+ELGEIVELP++    D+  A   +EF F DSVD+  
Sbjct: 150 SSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYCL 209

[Close]

BLAST of Carg06467 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-38
Identity = 95/177 (53.67%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 21  QRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSA 80
           + + K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SIKG S 
Sbjct: 11  KENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTS- 70

Query: 81  KAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTTT------------------- 140
            AILNFP+L+ LLPRPVSL PRD++AAA KAA M DFDTT                    
Sbjct: 71  -AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMSES 130

Query: 141 -----TASFSSSNYEG--------GSDELGEIVELPNIEEDIRAETWSEFEFIDSVD 166
                T SFSSS++           SD+L EIV+LP++   +     +EF   DS++
Sbjct: 131 SESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDSLE 182

[Close]

BLAST of Carg06467 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-37
Identity = 100/193 (51.81%), Postives = 119/193 (61.66%), Query Frame = 0


Query: 2   AEPNNWNSESDGTE-LKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTT 61
           A P N N+     +     +    +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLGTF T
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVT 92

Query: 62  AEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV----- 121
           A+MAARAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV     
Sbjct: 93  ADMAARAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKL 152

Query: 122 -DFDTTTTASFSS-SNYEGGSDE----LGEIVELPNIEE---DIRAETWSEFEFIDSVDW 180
            + D    A  SS S+Y     E    L +IVELPNIEE   D    + ++  + +  D 
Sbjct: 153 LEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDC 212

[Close]

BLAST of Carg06467 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.7e-36
Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 21  QRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSA 80
           +R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMAARAHD AAL+IKG S 
Sbjct: 35  KRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTS- 94

Query: 81  KAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAM-------------------------- 140
            A+LNFP+LA  LPRP S  PRD+QAAAA AAAM                          
Sbjct: 95  -AVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLS 154

Query: 141 -VDFDTTTTASFSSSNYEGGS--DELGEIVELPNIEEDIRAETWSEFEFIDS 164
              + T T++S S S+ E  S  +EL EIVELP++E     E+ SEF ++DS
Sbjct: 155 SSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDS 203

The following BLAST results are available for this feature:

BLAST of Carg06467 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581880.1	7.2e-109	100.00	Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma s...	[more]
XP_022955991.1	2.1e-108	99.50	ethylene-responsive transcription factor TINY-like [Cucurbita moschata]	[more]
XP_023528290.1	3.0e-107	98.50	ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979607.1	5.7e-106	97.50	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_038906604.1	6.4e-89	84.39	ethylene-responsive transcription factor TINY-like [Benincasa hispida]	[more]

BLAST of Carg06467 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39127	2.3e-41	58.38	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYD3	2.8e-39	56.28	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9M080	7.7e-37	53.67	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LU18	2.9e-36	51.81	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	1.2e-34	52.91	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg06467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVC4	1.0e-108	99.50	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1IP61	2.8e-106	97.50	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A5D3C9I7	4.9e-87	82.93	Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BHN5	4.9e-87	82.93	ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1GBC8	8.7e-76	77.50	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Carg06467 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25810.1	1.6e-42	58.38	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	2.0e-40	56.28	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	5.4e-38	53.67	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	2.1e-37	51.81	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	8.7e-36	52.91	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 29..40 score: 71.36 coord: 51..67 score: 69.52
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 28..93 e-value: 3.8E-34 score: 129.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..77 e-value: 2.5E-13 score: 50.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 28..87 score: 23.0243
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 27..87 e-value: 1.10765E-29 score: 102.735
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 28..88 e-value: 7.8E-24 score: 85.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 8..189
None	No IPR available	PANTHER	PTHR31985:SF154	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TINY-LIKE	coord: 8..189
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 28..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06467-RA	Carg06467-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity