Carg06338 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGGCTTCATGTAGTTAGTCAGTTCATTTTTAAATCAGTGTGATGGGGACTGTCGTTGATGCTGCTCCAATCAAGGTATAATTTGACTACGTTTTTACTTCCTATATTGAGAAAATTTATGCCAATTGAACTAATCAGAATCTCCATTTTATGATTTTTCTGGAGTTATGTGGGGATGGTTGTCTTTGCTTCCTTCTTGGATGAACTATTTGACCTGAAATTTCAGAAAAGTTTGTTCTGATCTACATGGTTCAAATGAAATTGCAGGCAACTAATGGAAGCTTAGCTGAGAAGAAGAAGCCTACAGTTGTCTTTGTTTTGGGTAAGTATACTTTTCAAAGATTAAATGCATTCGTAGGTGCTTCCTTTCTACCTTCCTTATGAGAAGAACTTCCATTTATTTTTTTATGCTACATTTTGTTTTGGATTCTAAGTGGTAGTTGGATTTTCTAATTACCAGGTGGGCCAGGTAGTGGCAAGGGTACTCAATGTTCAAATATCATTGAAAACTTTGGGTATACTCATCTTAGTGCTGGTGATCTTCTTCGGGCAGAGATCAAATCTGGTTCAGAGAATGGGTATGATATATGTCCTCGTACTTATGTTTCCAAACTTGAATAAGTATTCATTCAATCCTTATTTGTTTATTCATGCATAGTTGCCAAAGGTTAAAAATTCCATGCTTTTGGTGTCTCATTGCTTCAATTGAAGGAAATTCTGATTTTACTGTGAATTCCTATCTGTGCTAGATGTCAGGAATGCAAATTACATATTGTCTACTGATCCTACCACTTGATTTTCTCAGGACGATGATTCAAAACATGATTAAAGAAGGGAAGATTGTTCCTTCAGAGGTCACAATAAAGCTCCTTCAACGAGCAATGGAGGAAAGTCATAATGACAAATTTCTCATTGATGGATTCCCTCGTAATGAGGAAAATCGTGCTGCATTTGAAGCTGTTGTAAGCCATTTTCCTCTTTTCTCTGAGCATGGTTCTTTTAAAATTAAATTCCATTCTATACAATTGATTGTTGAGGTTGTTGTACAATCCAAGCTAGTAGTTCCATTTCACGTGACACAAAAGTATATTTCATTGATGTTTTGCAGACAGGCATTGAACCATCTGTTGTCCTGTTCTTTGATTGTCATGAGAAAGAGATGGAGAGGCGCCTGCTGAGTAGGAATGAGGTTTGAAGGGATTCATTTCTCTTGTATTTACATTTTTTCTTTGAAATTTTAATTTGACGTTAAGAATTTCCTTTATGGATATGATTCAGGGAAGAGTGGATGACAACATTGAAACAATTAGGAAGCGGTTTAGGGTTTTCTTGGAGTCGAGCATTCCTGTGATTGAGTACTATGAATCCAAAGGAAAAGTTTGGAAGGTTCTGATTCTTTCTCTTCAAACGTCAGTACTTTTTGGTCTATTTTTATTTTAAATTTTGAATCATGTTCTACTCTTCTTAGATTGATGCTGCGAGGCCTATTGAGGAGGTTTTTGAATCGGTTAAAGTTGTTTTTACTCCAAAAAATGAAAAGGTAAGTTTTGATGATATGCTATGTGTATATTTTTTTTCATTAACACGTCTTGCAATTGCTTGATAGAGAAGCTGAAACTCGGCGTTAGTTAGGCTGATGAGAAAAGTCATCAAATTTGGAGGGCTTGGGATGCCTATATAGTTCTGCTTCTTATTGGCATCGGAAAGAGATGCCAACAGAGTTTGTTGTGATTGTAGCCAAATTCCAAAATCTGAACCATGCTTGGGTACCAAACTCACACCTAGGGTCTGTTTGTTTGTAGGGAATTTGAATGTCCAACATCTTTTCATGCCTGGTATTAGATGCCGGGCAATTTGGAAGCCCAATGTCTTCTCATAGTCCTATTTCTTTTTTAACTGGAAAATTCCAATAGATGTTTTGTAATACAAATTAGATGAATATTGCATCCGAAGACTAAAAATTTAAATGTTGAACTTTTGCGGCACTGAATCTTTACGCATTAGACTGTTGCCTTCCGACCTTTTGTGGCCCTGAATCACCCTTGTTTTCTTTTTTGCTACAGTCTTGTTATGCGTAATACATTCTGGCATTCAATTCCTCGTTACTGGTACTAATATTGCTGTGCTTTGCCTTGTTGCAGGCTAACTGAAGATCAACTACCCAGTAGTTTTGCATTAATATCTGCTTTAAGGTAAGCCTCATCACAAACTTCGCTGATCAGCTTTTCTGGATGATACGTTCTTTGAAAAAAAAATTAAAAAAAAAAAAAAAAAACTCTTGGCCTGTAGAACATTTAGGTTAGTTGATAATAAGATTCGTGTCTGTTATCTAATAAATCAACTATGTCTAGTGTGAGCTCTAGGATTTCAATTTCGAATCATACTTGATAGACTAATGTTGTTATTTAAGGAAGAATATATTTGACTTTATGATTGCAATTTATAAAGCTGCATAAGTAGCATTTCCCCATTTTTAAACCCTTCGTGGTTGCTTCAATTCCATGTTTCTAATTTTTGTTTTTTTTTTTTTGTTTCTTTTATTCTATTGGTAGGTATTGATTTTGGTGGCTGTGTCAGAGTTGGATGTTTAGGTTCTATTCTATACAAGGAGTTAACCATATATTCTTATTATTGTTACCGCACTTTGTTACTAAGATTTGTAATAATAGTAAGTAGCAGGTTTCTTTGCATCTTACAAAAAAGAAAAAAGAAAAAAAAAAGGTCTATGTCTCTATATTCTTATTGAGATTGTATCCATTGATTTAAATAATAAAGGCAAGCCTTGGTTCTCTACTATTGATCTTTTATTAGCATTGTCTCTTCCCTTTAATGCATTGCTCCACCCCATCCCCATCCTCATCTACACAGCCTTCAGCCATTTTTTGGCATCTAAAACTAAAAGCAGCCTCATTATATAACTTTTGACAGCTTCTTACACATAATACAGACAAGGATTCGCCGGTAGATCATTGTCATGCTCATCTCAATTGAAGGGGAGAAAAGAAATGATCCGTCTACAGCTAGACTGTAAGAGCTTCAATTTTTTACGCCGTAAAATGCATGGAAATTTTGAATGATAGCTAGTCCAACTGATCTTTTTAATATATTTGACATTTTTTAAAAAATATTATCAACTTTGGATACAAAATTCTTGTACTTCTAATAGATACCAGTCCAAATAGACTAGATTTTACCAAGAATTTAATAAGATTATCAACCTATTATGATACTTTTTTGATGTTTAACTTTTTTATGATACTTTTTTGATGTTTAACTTTTTTGATGTTTAGAGATCTATTAGATATAAGTTTAACTTCAGCTCTTAAGAGAGTGGGTAAATAGATGAGTTAAAGAGACCTTAGAAAGACTATAAAGACATTCCAGACCGACTACAGGACTAGGATTATAATACAAGTCATGAGCGATAGAGAAGCTAAGTCGGATCAACTTTTGATGTAGAACGTTCAAAAACTATCCATCTTCTAGCAAACAATTAAGGCTTGCCTCGCAATTAGGACAGCAATTTGAATGAATATGAATGCATATAGGTAGAAAAGTTTGAGACATTGGTGGTTGTTATTAGATGGATACGATAGGTTAAACGAATAAGATACCATTGTCCTTAATGGCATCAATGACAATCTCAATTTTGCCTTCAATTTTTGCACTCTTTGGAGGGTCGTAAGAGATTACAAATACATCAGCTTCTTTACATCTCTCAGCAATTAGGTTCCCAATAATCCGACACGCATTGTCATCAGTGGGCGATGGCAATGAATACCTTAAATCCTTGCAATTGGTGCTTGCTGCCGACACCACTTTGCTTGTTCCTCGATGCATCACTTTGGCATGTATGAACCTCCTTGAAAAGTATACATCCAAAACAAATGGTCTCATGTACATATCTGTTCTTTGCTTCCATGATTTCCTGTTCGGTCTTTTTGAAGTTTCTCCTTTAGATCTTCGTGTCCAGGCTGCTTGAATGATAGAATTCTACAAAATGAAAACATGTCGAAACCTTAGATAAAATGTTCTACTCTTACGAAGTACGACATTGTCCTCCAACATGTGGTTTTTAGACATTTATTCGTAAAGATATCCACATTTCAAAGGATCAAATGTTAGGAATCACGGACCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGTTCTCGTAACTTTGATTTTTGTGTCCCTAAAAGGCTTCATACCAATGAAAATATTTTCCTTACTTGTAAACTCATGATCAACTCCTTAATTAGCCAACATGGGACTCCTTCCCAACAATCCTCGACACGAATAACTTACACTCCTAAAAGATAAACCTATCATTCTGATCAGGAATCCTCAAACACGAATGAATGATTAACGCTGAAAAAGAATTATAGTTTCCATTCTTCCACCTTTTCACTCCGCCTATTGCTTTTGTTCATTTCAGTACCCATAATTCTATTCTATTGGGCTAGAGAACATCTCATCCTATATTGAAAACCCCCTTTTCAATTATGAAAACAACAATCTACTATCATTTCTTCATCATATATTGAGATCTTCTAAGAATTTAAGAATTAATAGCAAAGCAAATAGTATCTTTTTAGCCGATCTCTATCTCATTCATTAAGCATTTCTTGAGATTTCAGGAGCAACTGTGGAAGTGGAAGCTTGGAATCAAAGTTTGGGTGTTCTAAAAGCTTAGGGAGAACAACCCAGATTCCAACTCCTTAACTAACTCTCAACTATTCAATTACAGTTTCGACTAGACATTCCGTCGAACACCTTGGCTGCACGATCCCAAACGCCATCCCTCTCAAAAAGAAGTGGAAGGCAAGGATTCGAATGCTATTTTATTCAATTTCATTCCCTCGTCAAAACAAGCACCAACAACTTCACAGATTTTTCGCGATGGGTATCGTAGAATTTCCATCATTCTTCGAAGTCGGAGATTTTATTTTTATGAGATAATTTTTTTTTT TCTGGCTTCATGTAGTTAGTCAGTTCATTTTTAAATCAGTGTGATGGGGACTGTCGTTGATGCTGCTCCAATCAAGGCAACTAATGGAAGCTTAGCTGAGAAGAAGAAGCCTACAGTTGTCTTTGTTTTGGGTGGGCCAGGTAGTGGCAAGGGTACTCAATGTTCAAATATCATTGAAAACTTTGGGTATACTCATCTTAGTGCTGGTGATCTTCTTCGGGCAGAGATCAAATCTGGTTCAGAGAATGGGACGATGATTCAAAACATGATTAAAGAAGGGAAGATTGTTCCTTCAGAGGTCACAATAAAGCTCCTTCAACGAGCAATGGAGGAAAGTCATAATGACAAATTTCTCATTGATGGATTCCCTCGTAATGAGGAAAATCGTGCTGCATTTGAAGCTGTTACAGGCATTGAACCATCTGTTGTCCTGTTCTTTGATTGTCATGAGAAAGAGATGGAGAGGCGCCTGCTGAGTAGGAATGAGGGAAGAGTGGATGACAACATTGAAACAATTAGGAAGCGGTTTAGGGTTTTCTTGGAGTCGAGCATTCCTGTGATTGAGTACTATGAATCCAAAGGAAAAGTTTGGAAGATTGATGCTGCGAGGCCTATTGAGGAGGTTTTTGAATCGGTTAAAGTTGTTTTTACTCCAAAAAATGAAAAGGGTCTGTTTGTTTGTAGGGAATTTGAATGTCCAACATCTTTTCATGCCTGGCTAACTGAAGATCAACTACCCAGTAGTTTTGCATTAATATCTGCTTTAAGACAAGGATTCGCCGGTAGATCATTGTCATGCTCATCTCAATTGAAGGGGAGAAAAGAAATGATCCGTCTACAGCTAGACTGAGCAACTGTGGAAGTGGAAGCTTGGAATCAAAGTTTGGGTGTTCTAAAAGCTTAGGGAGAACAACCCAGATTCCAACTCCTTAACTAACTCTCAACTATTCAATTACAGTTTCGACTAGACATTCCGTCGAACACCTTGGCTGCACGATCCCAAACGCCATCCCTCTCAAAAAGAAGTGGAAGGCAAGGATTCGAATGCTATTTTATTCAATTTCATTCCCTCGTCAAAACAAGCACCAACAACTTCACAGATTTTTCGCGATGGGTATCGTAGAATTTCCATCATTCTTCGAAGTCGGAGATTTTATTTTTATGAGATAATTTTTTTTTT ATGGGGACTGTCGTTGATGCTGCTCCAATCAAGGCAACTAATGGAAGCTTAGCTGAGAAGAAGAAGCCTACAGTTGTCTTTGTTTTGGGTGGGCCAGGTAGTGGCAAGGGTACTCAATGTTCAAATATCATTGAAAACTTTGGGTATACTCATCTTAGTGCTGGTGATCTTCTTCGGGCAGAGATCAAATCTGGTTCAGAGAATGGGACGATGATTCAAAACATGATTAAAGAAGGGAAGATTGTTCCTTCAGAGGTCACAATAAAGCTCCTTCAACGAGCAATGGAGGAAAGTCATAATGACAAATTTCTCATTGATGGATTCCCTCGTAATGAGGAAAATCGTGCTGCATTTGAAGCTGTTACAGGCATTGAACCATCTGTTGTCCTGTTCTTTGATTGTCATGAGAAAGAGATGGAGAGGCGCCTGCTGAGTAGGAATGAGGGAAGAGTGGATGACAACATTGAAACAATTAGGAAGCGGTTTAGGGTTTTCTTGGAGTCGAGCATTCCTGTGATTGAGTACTATGAATCCAAAGGAAAAGTTTGGAAGATTGATGCTGCGAGGCCTATTGAGGAGGTTTTTGAATCGGTTAAAGTTGTTTTTACTCCAAAAAATGAAAAGGGTCTGTTTGTTTGTAGGGAATTTGAATGTCCAACATCTTTTCATGCCTGGCTAACTGAAGATCAACTACCCAGTAGTTTTGCATTAATATCTGCTTTAAGACAAGGATTCGCCGGTAGATCATTGTCATGCTCATCTCAATTGAAGGGGAGAAAAGAAATGATCCGTCTACAGCTAGACTGA MGTVVDAAPIKATNGSLAEKKKPTVVFVLGGPGSGKGTQCSNIIENFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMEESHNDKFLIDGFPRNEENRAAFEAVTGIEPSVVLFFDCHEKEMERRLLSRNEGRVDDNIETIRKRFRVFLESSIPVIEYYESKGKVWKIDAARPIEEVFESVKVVFTPKNEKGLFVCREFECPTSFHAWLTEDQLPSSFALISALRQGFAGRSLSCSSQLKGRKEMIRLQLD Homology
BLAST of Carg06338 vs. NCBI nr
Match: KAG7028711.1 (UMP-CMP kinase 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 533.9 bits (1374), Expect = 8.1e-148 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Carg06338 vs. NCBI nr
Match: KAG6597242.1 (UMP-CMP kinase 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg06338 vs. NCBI nr
Match: XP_022937686.1 (UMP-CMP kinase 3-like [Cucurbita moschata]) HSP 1 Score: 408.3 bits (1048), Expect = 5.1e-110 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg06338 vs. NCBI nr
Match: XP_023540955.1 (UMP-CMP kinase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-109 Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg06338 vs. NCBI nr
Match: XP_022974746.1 (UMP-CMP kinase 3-like [Cucurbita maxima] >XP_022974977.1 UMP-CMP kinase 3-like isoform X1 [Cucurbita maxima] >XP_022974978.1 UMP-CMP kinase 3-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 404.8 bits (1039), Expect = 5.7e-109 Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy Swiss-Prot
Match: O04905 (UMP-CMP kinase 3 OS=Arabidopsis thaliana OX=3702 GN=UMK3 PE=1 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.5e-85 Identity = 157/199 (78.89%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy Swiss-Prot
Match: Q6K7H2 (UMP-CMP kinase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0778400 PE=2 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83 Identity = 158/208 (75.96%), Postives = 177/208 (85.10%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy Swiss-Prot
Match: Q7XI40 (UMP-CMP kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=URA6 PE=2 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.5e-83 Identity = 156/205 (76.10%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy Swiss-Prot
Match: Q8VY84 (Probable UMP-CMP kinase 1 OS=Arabidopsis thaliana OX=3702 GN=UMK1 PE=2 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.7e-74 Identity = 134/182 (73.63%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy Swiss-Prot
Match: Q5VRN0 (UMP-CMP kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0109600 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.2e-64 Identity = 114/188 (60.64%), Postives = 151/188 (80.32%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy TrEMBL
Match: A0A6J1FB26 (UMP-CMP kinase OS=Cucurbita moschata OX=3662 GN=LOC111444012 PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.5e-110 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy TrEMBL
Match: A0A6J1IHX4 (UMP-CMP kinase OS=Cucurbita maxima OX=3661 GN=LOC111473827 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.7e-109 Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy TrEMBL
Match: A0A6J1D011 (UMP-CMP kinase OS=Momordica charantia OX=3673 GN=LOC111016119 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 5.2e-100 Identity = 193/210 (91.90%), Postives = 200/210 (95.24%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy TrEMBL
Match: A0A1S4DSR9 (UMP-CMP kinase OS=Cucumis melo OX=3656 GN=LOC103483424 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 8.9e-100 Identity = 190/208 (91.35%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of Carg06338 vs. ExPASy TrEMBL
Match: A0A5D3D3A2 (UMP-CMP kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003300 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 8.9e-100 Identity = 190/208 (91.35%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of Carg06338 vs. TAIR 10
Match: AT5G26667.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86 Identity = 157/199 (78.89%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of Carg06338 vs. TAIR 10
Match: AT5G26667.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86 Identity = 157/199 (78.89%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of Carg06338 vs. TAIR 10
Match: AT5G26667.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86 Identity = 157/199 (78.89%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of Carg06338 vs. TAIR 10
Match: AT3G60180.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 279.3 bits (713), Expect = 3.3e-75 Identity = 134/182 (73.63%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of Carg06338 vs. TAIR 10
Match: AT3G60180.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 279.3 bits (713), Expect = 3.3e-75 Identity = 134/182 (73.63%), Postives = 162/182 (89.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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