Carg06263 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTGTTTTTTTGAAGGATTTAAAACCCATTGAATTCATTTCAATTTCCTCACATGTCTTTCCTCGAAGAATTTCAAGCCAGTACGTATTATGCTATTTCATCTTCTCTTTTGCTGCAATTTCGCACGATTGATTAATTTCGAAACCCTATCTCGATTATCTGATAGTCGTTAGTTACTGTAATTCGTTCTTTTCGTTTTCAGTGTGTTAGTGTCTTTCATTCGGGTTTTTTAACAGATTTTTTCTGTTTCTTTCTTTTTATACGATCAATTTTGTGATGAATGTGTCAGGTTCTTGATTTATAGTGATTGCTTTCTGTTCTGGATTTAGGATTCTAAGCTTTTTTGTGGGTTAGTGTCTGTATATGCATGAGGAAACTGGTTTGATCAAGTTAACAATAAGATTAGAATAAGAAAATGGAAATAGAGGGCGAGAGAGAAGGATGATAAATAGAGATTTGAAAGCATCTATCATTCAATTGGGTCGCACGGCCAATTCAAGCATAACTTAGTAGATATAACATCAATTATCAATTATAAAGGTTATATTTTGATCTCTTACTTCTGCAATTGTCGAACTAAACGAAAAAAAAAAGTCACTCAGTAACTTTTTAACTGAAGATATTCAATTTCTGTGTTTTACATCTTTGTTTTGTACCTTTCCACAGATCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCGTGATTTAGATCAAAGTTTGCAAGGTGTTCATTGTTTCTTATTCGTTTCTCTCCTGTTCCTTTCTTGATTCTTTATCGTTTTTTTATGGACGTTGGGTTGACTTGGAAATAACCCCAAACTCTTTGTAAGCTCTTTTTTATTGATGTCTAGAAAATAAAAGTAAATGGCCTCCTATGTCACTGTTATTATACTCTATGGGTTACTCATCTGTTTTTCTCTGTTAACTTTCAAGAACGTTGTTATGTTTGTAAATGCAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAATATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTATGTGCAAGTTCAATGAAACTTGTTTAAGTTGCGTTTGCTTTTCCATGATGTCAATCGAGTGTGACTTTGAACTGAGGCACTCTCTGCTTCATGATAATGATTCGACACTAATTTTCTGCTCAATTCAAGTTAATATAAGAAAAAGAGATAAATTAGGCCACATTTTATAACCACTTGGTTTTTCTTTTTAAATATGCTTGTTTCTCCCAATTTTTCTTCAATGAGTTCCACCATTCTTAAGAAAACATTTGAATTCTTAACTAAATTTTAAAAACAAAAACAAAAACTAAATTTTGAAACTACTTTCTATAGTTTTAAAAATTTAGCTTGGTTTAAGGGAATTCATAGGTGAAAGTAGTATTTATAGGCTTCATTTTGATAAACTAAATGGTTATCAAATGGAGGCTTACCATTTTTACAAAATGCATACAGGGTGTATGATATTTAATCGATATACCGAGGTCTTTTTAGTGTTTGCAGTTTTGCACTCGTGCACTTGTCTCCTCTAACCTCTTGTTTGGAAAGAACCACTGTGAAAGAAACTTCATGTTTAAACTTGTCACCGACTCGTACATGCCCTAGAGTGAGGAGGTATGAGGGAGTCTCCCAGGTTTCTCTTAAGGTCTCCACTTTCATCTCAATGTCTGACACAGAAACTAGTGCCTCATCCTTGACCACCAGTATCAGATCTTGATATTTGACATAGAAACTAGTACCTTATCCTTGACCACCAGTATCAGATCTTGATATTTGACATAGAAACTAGTACCTTATCCTTGACCACCACGATCATACCTTTGACAAACCTCGTTTCTTTTTTATGCTTTGTTGTCTACAACTATCGCTGTTTTTTTGTGTGTTTTCTTTTGTTATTTGGCTGGAAAAAGAAAGTTCATCTTCTTATTGTTTATATTCTTATCTACACTCTTCATTTATATTGTGCTTCAGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGGTAGTACATGCGATTCCACCTTTGATATCCTCTATGCTCCAGTGAATATGGAGCATAAATGCATTTATCTTTTTCATTTTGGATCCAACTCCCATCTTCTATATCATGGTTATTTGCAGAAAGAGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTCTGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAGTAAGATCATCTTCTACATGATTAATGTTGAAATTATCTACTGATAAAAGACACCATTTACTTTAGGTTACATAATTACATTACTGTTTATGATGAATTGGGAATAGTAGTATATACTACAAAGACATTTATTTTATGCATGTTGGGCAAGAGTTATAGGACATCATCTGTGACGAAAATTATTTTGTACAGAACCCGGCATGGCCAGACTGCGGCTGCATCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATGTATGTGACAACCCTTTCCCCCTCTACTTACATTTTTTTTTGTGGTTCGAGTCTATAATCTAAGCCAGTCTTCCCATTCATACAGTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCAGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGTATCAGATCAACAGTGTGCTGCCTTATTTTATATGAAATACATTAAAGTCAAATGTAACTGCAGAATATCCTGCTCAGCTAGTCCATAAATTACTTGCAATTCCAATCCTTGTAAATACTGTTTTTGCTTTAATGCTGGTTTTTTAGTGGCTACAAAAGTTTTGAAATTGTAGAATCTATGGCAGTAACTCCAAATCGTTTGAGGCCCCTTCTCATCCTGGGAAGTTGATCAAGTTTCTTCAAGAAAGTGTCAACTCATGAGGATTTGAAGTGGGCCTTAAAACCATTTGAAGATACAGAATATGACACTGTTTTTCATTGTAAAACACACTGATTTGATTTGCTGCATGGTTGGGGATAAAAACAGAGATGCTTAGGCGTCTTTGGATGTTTGTTAAGAGGAGACATGAAGTGTCCAATTTTGACACTTTTGTGCTGTTCATTTTTGTTGTACATTAGTTTGCCAAATAAAGTTATTTGGAGTTCAATTAATTATGTTAAGTGAATGTTTACCCATGTAAAGAAATAAATTGACCTTATATGTGTCATGTGTTTTGTGAAGTTAGAAAAATATTTAACAATTTAATCCCTATTTCGAAAAAAAAAAAAATTACGAGGGAAGAAGTGCAGTTTCATCTGATGTGAGCAAGGCCCTTCCGTTGCAGGGTAAAATGGGGTTGCTTAACTACGAATCTACTCCACAAGAAGGTTCTTGTGCTCGTGCACTATAGTTTATGTATGTACTTTGAGCTACGTTCAAATT TTTTTGTTTTTTTGAAGGATTTAAAACCCATTGAATTCATTTCAATTTCCTCACATGTCTTTCCTCGAAGAATTTCAAGCCAATCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCGTGATTTAGATCAAAGTTTGCAAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAATATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGAAAGAGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTCTGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAAACCCGGCATGGCCAGACTGCGGCTGCATCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATGTATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCAGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGGTAAAATGGGGTTGCTTAACTACGAATCTACTCCACAAGAAGGTTCTTGTGCTCGTGCACTATAGTTTATGTATGTACTTTGAGCTACGTTCAAATT ATGTCTTTCCTCGAAGAATTTCAAGCCAATCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCGTGATTTAGATCAAAGTTTGCAAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAATATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGAAAGAGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTCTGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAAACCCGGCATGGCCAGACTGCGGCTGCATCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATGTATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCAGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGGTAAAATGGGGTTGCTTAACTACGAATCTACTCCACAAGAAGGTTCTTGTGCTCGTGCACTATAG MSFLEEFQANLESLPNILQKKYALLRDLDQSLQGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSLDGGTKSGRGTEGGRGGRKKTRHGQTAAASAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPNVLQDRMVSFWLCWSKRTTERKMVLFRLRRLERSPKRKIIQGKMGLLNYESTPQEGSCARAL Homology
BLAST of Carg06263 vs. NCBI nr
Match: KAG7028787.1 (PHD finger protein ING1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 521.5 bits (1342), Expect = 4.1e-144 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of Carg06263 vs. NCBI nr
Match: XP_022944129.1 (PHD finger protein ING1 [Cucurbita moschata] >XP_022944213.1 PHD finger protein ING1 [Cucurbita moschata] >XP_022944294.1 PHD finger protein ING1 [Cucurbita moschata] >KAG6597320.1 PHD finger protein ING1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Carg06263 vs. NCBI nr
Match: XP_023539868.1 (PHD finger protein ING1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 398.3 bits (1022), Expect = 5.3e-107 Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Carg06263 vs. NCBI nr
Match: XP_022974486.1 (PHD finger protein ING1 [Cucurbita maxima]) HSP 1 Score: 391.7 bits (1005), Expect = 4.9e-105 Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Carg06263 vs. NCBI nr
Match: XP_038875360.1 (PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875369.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875377.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875386.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875393.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 374.8 bits (961), Expect = 6.3e-100 Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy Swiss-Prot
Match: Q9LIQ6 (PHD finger protein ING1 OS=Arabidopsis thaliana OX=3702 GN=ING1 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.1e-66 Identity = 139/204 (68.14%), Postives = 167/204 (81.86%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy Swiss-Prot
Match: Q8WYH8 (Inhibitor of growth protein 5 OS=Homo sapiens OX=9606 GN=ING5 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.0e-20 Identity = 73/216 (33.80%), Postives = 114/216 (52.78%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy Swiss-Prot
Match: Q5ZKY4 (Inhibitor of growth protein 4 OS=Gallus gallus OX=9031 GN=ING4 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19 Identity = 73/221 (33.03%), Postives = 115/221 (52.04%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy Swiss-Prot
Match: Q9D8Y8 (Inhibitor of growth protein 5 OS=Mus musculus OX=10090 GN=Ing5 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19 Identity = 68/212 (32.08%), Postives = 110/212 (51.89%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy Swiss-Prot
Match: Q3T095 (Inhibitor of growth protein 4 OS=Bos taurus OX=9913 GN=ING4 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19 Identity = 72/231 (31.17%), Postives = 114/231 (49.35%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy TrEMBL
Match: A0A6J1FWG2 (PHD finger protein ING OS=Cucurbita moschata OX=3662 GN=LOC111448643 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 6.7e-108 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy TrEMBL
Match: A0A6J1IBH6 (PHD finger protein ING OS=Cucurbita maxima OX=3661 GN=LOC111473163 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.4e-105 Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy TrEMBL
Match: A0A6J1DZM6 (PHD finger protein ING OS=Momordica charantia OX=3673 GN=LOC111024558 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 1.1e-97 Identity = 193/206 (93.69%), Postives = 197/206 (95.63%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy TrEMBL
Match: A0A1S3AWY6 (PHD finger protein ING OS=Cucumis melo OX=3656 GN=LOC103483518 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.4e-97 Identity = 191/206 (92.72%), Postives = 197/206 (95.63%), Query Frame = 0
BLAST of Carg06263 vs. ExPASy TrEMBL
Match: A0A0A0L831 (PHD finger protein ING OS=Cucumis sativus OX=3659 GN=Csa_3G133330 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 5.4e-97 Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Carg06263 vs. TAIR 10
Match: AT3G24010.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 253.8 bits (647), Expect = 1.5e-67 Identity = 139/204 (68.14%), Postives = 167/204 (81.86%), Query Frame = 0
BLAST of Carg06263 vs. TAIR 10
Match: AT1G54390.1 (PHD finger protein-related ) HSP 1 Score: 89.7 bits (221), Expect = 3.7e-18 Identity = 67/234 (28.63%), Postives = 116/234 (49.57%), Query Frame = 0
BLAST of Carg06263 vs. TAIR 10
Match: AT1G54390.2 (PHD finger protein-related ) HSP 1 Score: 89.7 bits (221), Expect = 3.7e-18 Identity = 67/234 (28.63%), Postives = 116/234 (49.57%), Query Frame = 0
BLAST of Carg06263 vs. TAIR 10
Match: AT1G54390.4 (PHD finger protein-related ) HSP 1 Score: 85.1 bits (209), Expect = 9.2e-17 Identity = 63/218 (28.90%), Postives = 107/218 (49.08%), Query Frame = 0
BLAST of Carg06263 vs. TAIR 10
Match: AT1G54390.3 (PHD finger protein-related ) HSP 1 Score: 85.1 bits (209), Expect = 9.2e-17 Identity = 63/218 (28.90%), Postives = 107/218 (49.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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