Carg06183 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGTTAATATTCGGCGAGGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA MVEYATIDREWMCVWNGEDYFIDTCNCQGSGEFEIRSYVHEHLETYSFELTLGDSQQTEPPSTLVSSYVFDNRMASMRTRQYMYPLYRKRPEAGYRPNQSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTDCGEFDESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKIVTGLASLLKEKS Homology
BLAST of Carg06183 vs. NCBI nr
Match: KAG7028864.1 (hypothetical protein SDJN02_10046, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 461.8 bits (1187), Expect = 3.3e-126 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Carg06183 vs. NCBI nr
Match: KAG6597404.1 (hypothetical protein SDJN03_10584, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.4 bits (612), Expect = 1.6e-59 Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Carg06183 vs. NCBI nr
Match: XP_022937081.1 (uncharacterized protein LOC111443488 [Cucurbita moschata]) HSP 1 Score: 236.1 bits (601), Expect = 2.9e-58 Identity = 122/132 (92.42%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of Carg06183 vs. NCBI nr
Match: XP_022974410.1 (uncharacterized protein LOC111473084 [Cucurbita maxima]) HSP 1 Score: 229.6 bits (584), Expect = 2.7e-56 Identity = 118/132 (89.39%), Postives = 122/132 (92.42%), Query Frame = 0
BLAST of Carg06183 vs. NCBI nr
Match: XP_023539817.1 (uncharacterized protein LOC111800384 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.0 bits (580), Expect = 8.0e-56 Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 0
BLAST of Carg06183 vs. ExPASy TrEMBL
Match: A0A6J1F9C5 (uncharacterized protein LOC111443488 OS=Cucurbita moschata OX=3662 GN=LOC111443488 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58 Identity = 122/132 (92.42%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of Carg06183 vs. ExPASy TrEMBL
Match: A0A6J1IDW1 (uncharacterized protein LOC111473084 OS=Cucurbita maxima OX=3661 GN=LOC111473084 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56 Identity = 118/132 (89.39%), Postives = 122/132 (92.42%), Query Frame = 0
BLAST of Carg06183 vs. ExPASy TrEMBL
Match: A0A6J1C8R5 (uncharacterized protein LOC111009423 OS=Momordica charantia OX=3673 GN=LOC111009423 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 4.1e-42 Identity = 98/136 (72.06%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Carg06183 vs. ExPASy TrEMBL
Match: A0A6J1IWI4 (uncharacterized protein LOC111479130 OS=Cucurbita maxima OX=3661 GN=LOC111479130 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 8.1e-38 Identity = 92/133 (69.17%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of Carg06183 vs. ExPASy TrEMBL
Match: A0A6J1ECW7 (uncharacterized protein LOC111432030 OS=Cucurbita moschata OX=3662 GN=LOC111432030 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37 Identity = 90/133 (67.67%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Carg06183 vs. TAIR 10
Match: AT4G14620.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 58.9 bits (141), Expect = 6.0e-09 Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Carg06183 vs. TAIR 10
Match: AT2G38820.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of Carg06183 vs. TAIR 10
Match: AT2G38820.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of Carg06183 vs. TAIR 10
Match: AT3G22970.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06 Identity = 43/126 (34.13%), Postives = 58/126 (46.03%), Query Frame = 0
BLAST of Carg06183 vs. TAIR 10
Match: AT3G22970.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06 Identity = 43/126 (34.13%), Postives = 58/126 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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