Carg06161 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06161
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr06: 8749486 .. 8750174 (-)
RNA-Seq ExpressionCarg06161
SyntenyCarg06161
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGGCATTTACGCTGCTCGAACGGCTGAGCTATCATTGGACGGTTACTGTACGAAACCCGAAAATATAATGCGATAATGATATTCTGCGATGGAGAATAGCAGGGAGACAGAGAGAGAGAGAGAGAAGAAATGGGGTGAAGAAGGTGATTGGTTTGTGGGGTTTTTTCTTATGACCCATTTTGTTGCCTTGGTTCTTATGCTTTTCATTTGATCGAAGCGTTTGATTAGAGGAAATCGCTGTTTCGCCTCTTTTGTGGGAGACCCATTTGCTTGAAACTTGATTTTGTGTTCTTTCTGAGCTGTACTGCTTCTTGTATGATTGGGAACAAGCTGCTTTTTCAGCCGTTCTGGTGATTTTTGGTCCCCTGATTACAAAAGGGTTGGTTTCTGCAGCGTATTTGAACTATTGATTTCCTCCTTTTGCACTAATTCTTGTGCGTTGAGTTCATAATCGACTCATATAGATAAGATTTGTTTGAAACAATCAAGTTCTTGTAAATTTGGGGAAGTTTATGTGGTTGGAGATCTGGATTTCATCTGTTTTCCTCATCCTTCTCTTTGAAGCTGCCTTTTATTAAAGGCTAAATGGCCACAATGTGAACAAAGCTTCATTTCATAATGACGTCTGTCTCTTGCTATGCAGGTGAACACAGTGACAAGGAGATGGGAAGGCTCGTGGAGGATTAG

mRNA sequence

GCTGGCATTTACGCTGCTCGAACGGCTGAGCTATCATTGGACGGTTACTGTGAACACAGTGACAAGGAGATGGGAAGGCTCGTGGAGGATTAG

Coding sequence (CDS)

GCTGGCATTTACGCTGCTCGAACGGCTGAGCTATCATTGGACGGTTACTGTGAACACAGTGACAAGGAGATGGGAAGGCTCGTGGAGGATTAG

Protein sequence

AGIYAARTAELSLDGYCEHSDKEMGRLVED
Homology
[Close]
BLAST of Carg06161 vs. NCBI nr
Match: KAG7028886.1 (hypothetical protein SDJN02_10068, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1  AGIYAARTAELSLDGYCEHSDKEMGRLVED 31
          AGIYAARTAELSLDGYCEHSDKEMGRLVED
Sbjct: 1  AGIYAARTAELSLDGYCEHSDKEMGRLVED 30

The following BLAST results are available for this feature:
BLAST of Carg06161 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7028886.11.2e-07100.00hypothetical protein SDJN02_10068, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg06161 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg06161 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg06161 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06161-RACarg06161-RAmRNA