Carg06108 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06108
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic
Location	Carg_Chr04: 21951776 .. 21956927 (+)
RNA-Seq Expression	Carg06108
Synteny	Carg06108

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTTAACACTTGCCCATCTATTTGTTTGATTTTTCTCTTTTTTTCTTTCGGAAAGAAGCTTCGGACTTACTACCGCGAGCGTTGTAAATTGAGCACTTCCACCAAAGAAGTCGTGGGTGGACGAATGAACTGAATCTGAACCATGGCGTTCACAGCAATATCTTCTTCAATGCCGTCTAGTGCTTTTGTGCGTTCAATTCTCTCCTCCCAGTGCATATCAACTCCCACCACTCCACAGAAATCCTCATCTCTCTCGTGGGCATCTTCATTTCCGTCCATTAGCCTATCTAGAGGCTCCCCTTTTGTCTCCTCGAATCCCGCGCATGCCAAGGTATAATTTCTTTACTGGCAGCCTATTCAATTCCCTGTTTATTCCGGAAGATATCTTATTTCCATTTTTAAGTTTATGATTTATCTGTTGTGGACCACGAATTTCTTGCACATGTACTTGGTTTTTATATGAAAAAATTCTGGAACTAACAAATTTACAAAGGCAAGACAAGTTGCTTTGATTATTCTTAAAATTTTTGGCTATTTTCTCTCTTGTTGTTCACTTCTATTGGGATAAGTTATGTGAAAATCTAGTTTCAGACAAATCGATTGGTATAGGAATGGAATCAAAATAAACCGGAAACCTGAAACCTGAAACACTAGTGCAAAAGTTGGGGAAGGAGAATTATTTGTGAGGAAGTTATCTGTTGTGGATTTGCTGCCAGTTATGTATTCAAGCCAATGGACAATACGAACTCGACTATATTGTAACTTTCATAAAACTTGCTCTTCAGGATATGGTTTGAGAATTTGAAAGAATACTGCCGGCAGTCATCTTTAGGTGAATAGTCGTGCTGTTATTATGGCTGGAAAAGATAGAAATGACTATTACATTGTATACAGAGAGTTCTCAACTATTTTCTGCTTCGTTCCAGGTCAAATGGCTTTATTGCTGTTGCTGGGCAGTTCTCCAGTTCCGTATCTTTCAAATTCTTCATTTTCTACCTTGTATTTAAATTGAGCTTGAAATTGATGACAACCTTTCAGATTTAGAATAAATACACTTGAGCCGTTTTGAACCCATGACCACTTGGTTAAACCTGGGAGAAGTTCCCTAAGTTGAAATCCACGGACACATCTTGGTTATATTAGCAACTTACTGACTTGAGCAACATTCAGGAAGTTTTGCATTGAACGAAGTACAACATCTGTCTTTTTGAAGAATTGGAATAGAAAAGCCCCCTTTGGTGGCAATGCTGTTATGGATGCGTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGAGCTTTCCCTTTTGGGCTTCCCCTCAATACTTTAAAACGTGTTTACTAGGGGAAGGTTTCCACACCCTGCATTATCCCTTACCAACTACCATCTGTCTACAATCTAGATGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAACGCGGCTTTCATGACAGTTATTTTCCTTGGTCTATATCATATTATTGGTTCAAAAGTTTGTTGCTATCTGGAAAGCTTGGGTACAGGTCCAACACTTGCGCTGTAGCCTGTGATTATGAGGCTTACTAGCAGCTACATGGATAATAGGATGTAGAGCAACCAAACCATTTGGAGTAGAAGCAATAACAAATAGCCGAGGATAGCAAGGCTTTAAAGAAGGTTAGGTAACCAAAGATCTTTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCTTCTTCGATTCCCCAAACTTGAAATGAGCATGGCTTTCTAGTCGAGACCAGTTCTTAGAGATATTTAGCCAAGGACTGTGTAAACTCAAACCATTTCTTCTACCTGAATGCCAACCATTAATGTCAGACCCATGAATACTAGCAATAACCTGTTGCCAACAAGAAGAAGGTTCATTTATAAAACACCAACCTCATTATGCTATCAAAGCCAAATTCCTGTTTTCAATGCTCCTATTTCAAGACCACCATCATTCTGAGCTTTTGTAACAATGCTCCGGCGAACCAAATGAGTTACTTTCCCCCCTTCCTTTCCTTCTCAAAGAAAAATTGGAGAAGTCTTTTGAACTCCACTCTAACCAAAGACCATAAGAACTAAAGACATATAATAAGGCTTTCCCTAGATAGAGTAAAGCGCTTCCATCTATCAATAATCAGAATCTATTATACCATAGGATAAGAGTTCCTGCTTTTCGTAATGATTGGAAGAAGGAATGACAACTCCTTTAATCAAAGCAGTTCCTGAATCACAAGAGCAGTTAATGTTTGACTACAAGGTATGGAAGAGAACGTCTTTGGATCTTCACTTGTATCCAAACAGAGTTTAAGAGAAGAGGAACCCAAGAGTCGCAAACAACCTTCTTCAACATCTGGATTGATTAAAGAAACTTCTGGAAAAATTATAAAAGAAGCAACCATTTCTTTTTTCCGAGAATAATGAAGAGGGTGAGATTCCTTTGATCTCCTTAAACCAATTTAGTACCATGAGGGCTGAGAATCTCTGTACTGGAAGGATTCGAATGCGAAACATTCTTGGCAATAGGCGAAACCTCTTGAACTGGAAGGGAAGCATTAACTACAGGGGGAACTGTAGGAAAAAACCGGCCTCAAGAGACGTCTTCATTAATGGCGTTGGCTGAACTGAAACGTTATCAAGGGAATTCCGTTCGTCTCATTAAAGGGCTGTAATAAAGATTGAATGCCTTACAAGAGTCTTCTCCGGGCAACGAGGCAACTTCTTTTGCTAAAATCTGTCTGCACCACCTCCTATTTTTTCTAATCCAAAAAGATTTGAGTCGTAAGTAAAGTCTTTCAAGAATCCGTAAAAACGACGCTGACCTTCCAATTCATCTTTACATCATTCTTATAACTATTAATAGAAGTAACTTTTCCAATATCCAATTTCTTTAGGGAAGCTGAATTTGGTGAGCACTCCTGCTGACACTTCAGAGAATCTTTTACTGTTTTAAGAGAGTCGAGTAGCTTCTAAATTTTGTTTTCTTTTGATAAACGACCAGTATGTTTACACTTGTAGGTTTTATTCATACAATCAGCTTGGACAAGAAGGTCACGAGGGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAACGGACAGATATGTATATGAGGCCATTTTTACTAAATGTTTTCTTTTCAAAGAAATTTATCCATGCGAAGGTAATGCATAGAGGAACAAGCAAAGTAATATCAGTGGCGACAACAAATGCAAAGGATCTTAGGAACAGTTTACCGTCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATGTCGTACGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAGCTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATGTTTGTACCTTGAATTTAAAAATCTGGAAGAATGAAACAGAAAAAGAGAACGACTTAAGGTAAGGCCTCTTATATAGGCAGCAGAGGATGAGACTGTAAAAGCTAACATCTTCCTATTTAACTCGTTTGAAATATTCGAAGCTGTTGCTCTTACTAAAAACTCCCTTGCATGCTATGCCAGATATGATTCTATTGGCAGACTTATCTCATGATTTCGAGAGCTAACTTCTGAAGTTTCTTTACTATATTGTGAAAGGAAGATTGTTAGGACATGGGTAAGCATAGAACGTTCTTCTAGATATGGCAGTAGAGTCATGATGTCAATAATCACAGAAGAGGAGGGGTGGGGTGGTGGATTGGATATCTGCTTTTCTTCTCCATCTTACTATTTCAAATTTGTTCCGTTTTTATTCCTAAGCTTTCAAAAGATCTCTCTTTAGATGTTTTATTTTGGCATCAACTTTACATATTTATTTTAGTTCCTCAACTTCAAAAAATTGACCATTTAATTCTTACCGTTGTTTTATTATGTGAGCATATATTTGCACTGTATAACTTGAAATTAAGTACAAGGACTAAATTTGTGAAATAAGTCTTAGGAACAAAATGATTATATTTAAAAAGTAACGTGATTCATATAGACAAGGAAAGTTGTAGGACAAAATGATTATTTTTAAAAGTGTAGGGCCTTCTTTTTATGCGAATTAAACAAAATTTTCGCTATCAATGGCCAGTGTGGACAACGGGTTCTTGAGGGCCCCACAAAAGACGAAGGCAAAGGCAGCGGCAGCAGCAGGTGTAAGTATCTCATCCATAGAAACAAAACCAGTGGTAGTGGTTGAGTTAGTCTTTCTTAACCTTGCTTCCGTTTCATTCCGTTCCTTGGCCATGGCCTCTCCTTCCATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCCCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTACGCCTTCCCAGTCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAATGCGTTGGGTCCGAGTTTGACCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTACGTGAGCTTGGCTAGCTGGCTGCATATGCTTCGTTAATTTCGTTTTGAATTTGATTTATGTTGGTATCATGGTTTGTTCTGTGTATATATGCGCGCAGGTTCTTAGGAGTTGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAACTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

mRNA sequence

AGCCTTTAACACTTGCCCATCTATTTGTTTGATTTTTCTCTTTTTTTCTTTCGGAAAGAAGCTTCGGACTTACTACCGCGAGCGTTGTAAATTGAGCACTTCCACCAAAGAAGTCGTGGGTGGACGAATGAACTGAATCTGAACCATGGCGTTCACAGCAATATCTTCTTCAATGCCGTCTAGTGCTTTTGTGCGTTCAATTCTCTCCTCCCAGTGCATATCAACTCCCACCACTCCACAGAAATCCTCATCTCTCTCGTGGGCATCTTCATTTCCGTCCATTAGCCTATCTAGAGGCTCCCCTTTTGTCTCCTCGAATCCCGCGCATGCCAAGGTTTTATTCATACAATCAGCTTGGACAAGAAGGTCACGAGGGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAACGGACAGATATGTATATGAGGCCATTTTTACTAAATGTTTTCTTTTCAAAGAAATTTATCCATGCGAAGGTAATGCATAGAGGAACAAGCAAAGTAATATCAGTGGCGACAACAAATGCAAAGGATCTTAGGAACAGTTTACCGTCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATGTCGTACGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAGCTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATTGTGGACAACGGGTTCTTGAGGGCCCCACAAAAGACGAAGGCAAAGGCAGCGGCAGCAGCAGGTGTAAGTATCTCATCCATAGAAACAAAACCAGTGGTAGTGGTTGAGTTAGTCTTTCTTAACCTTGCTTCCGTTTCATTCCGTTCCTTGGCCATGGCCTCTCCTTCCATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCCCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTACGCCTTCCCAGTCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAATGCGTTGGGTCCGAGTTTGACCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTTGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAACTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

Coding sequence (CDS)

ATGGCGTTCACAGCAATATCTTCTTCAATGCCGTCTAGTGCTTTTGTGCGTTCAATTCTCTCCTCCCAGTGCATATCAACTCCCACCACTCCACAGAAATCCTCATCTCTCTCGTGGGCATCTTCATTTCCGTCCATTAGCCTATCTAGAGGCTCCCCTTTTGTCTCCTCGAATCCCGCGCATGCCAAGGTTTTATTCATACAATCAGCTTGGACAAGAAGGTCACGAGGGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAACGGACAGATATGTATATGAGGCCATTTTTACTAAATGTTTTCTTTTCAAAGAAATTTATCCATGCGAAGGTAATGCATAGAGGAACAAGCAAAGTAATATCAGTGGCGACAACAAATGCAAAGGATCTTAGGAACAGTTTACCGTCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATGTCGTACGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAGCTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATTGTGGACAACGGGTTCTTGAGGGCCCCACAAAAGACGAAGGCAAAGGCAGCGGCAGCAGCAGGTGTAAGTATCTCATCCATAGAAACAAAACCAGTGGTAGTGGTTGAGTTAGTCTTTCTTAACCTTGCTTCCGTTTCATTCCGTTCCTTGGCCATGGCCTCTCCTTCCATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCCCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTACGCCTTCCCAGTCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAATGCGTTGGGTCCGAGTTTGACCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTTGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAACTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

Protein sequence

MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPAHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGIIVDNGFLRAPQKTKAKAAAAAGVSISSIETKPVVVVELVFLNLASVSFRSLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY

Homology

[Close]

BLAST of Carg06108 vs. NCBI nr
Match: KAG7033427.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 923.7 bits (2386), Expect = 6.5e-265
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60
           MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA
Sbjct: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180
           KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180

Query: 181 IVIDTIKENGIIVDNGFLRAPQKTKAKAAAAAGVSISSIETKPVVVVELVFLNLASVSFR 240
           IVIDTIKENGIIVDNGFLRAPQKTKAKAAAAAGVSISSIETKPVVVVELVFLNLASVSFR
Sbjct: 181 IVIDTIKENGIIVDNGFLRAPQKTKAKAAAAAGVSISSIETKPVVVVELVFLNLASVSFR 240

Query: 241 SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW 300
           SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW
Sbjct: 241 SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW 300

Query: 301 IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR 360
           IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR
Sbjct: 301 IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR 360

Query: 361 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 420
           RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK
Sbjct: 361 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 420

Query: 421 LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 480
           LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP
Sbjct: 421 LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 480

Query: 481 YY 483
           YY
Sbjct: 481 YY 482

[Close]

BLAST of Carg06108 vs. NCBI nr
Match: KAG6602740.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 887.9 bits (2293), Expect = 4.0e-254
Identity = 468/482 (97.10%), Postives = 469/482 (97.30%), Query Frame = 0


Query: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60
           MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA
Sbjct: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180
           KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEG+L 
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGRL- 180

Query: 181 IVIDTIKENGIIVDNGFLRAPQKTKAKAAAAAGVSISSIETKPVVVVELVFLNLASVSFR 240
                    G  VDNGFLRAPQKTKAKA AAAGVSISSIETKPVVVVELVFLNLASVSFR
Sbjct: 181 --------LGHGVDNGFLRAPQKTKAKATAAAGVSISSIETKPVVVVELVFLNLASVSFR 240

Query: 241 SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW 300
           SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW
Sbjct: 241 SLAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGW 300

Query: 301 IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR 360
           IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR
Sbjct: 301 IGGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR 360

Query: 361 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 420
           RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK
Sbjct: 361 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 420

Query: 421 LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 480
           LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP
Sbjct: 421 LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 473

Query: 481 YY 483
           YY
Sbjct: 481 YY 473

[Close]

BLAST of Carg06108 vs. NCBI nr
Match: XP_022963850.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 6.1e-130
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 244 MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 303
           MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG
Sbjct: 1   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 60

Query: 304 PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 363
           PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS
Sbjct: 61  PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 120

Query: 364 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 423
           KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 121 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 424 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY
Sbjct: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 239

[Close]

BLAST of Carg06108 vs. NCBI nr
Match: XP_023521950.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023553300.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 8.9e-129
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 242 LAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 301
           +AMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI
Sbjct: 1   MAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 302 GGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 361
           GGP PSQSRRDQKEQNNNNNNNALGPSL DLLNNSSDSHYQFLGVGAEADLEEIKSAYRR
Sbjct: 61  GGPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 120

Query: 362 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 421
           LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL
Sbjct: 121 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 180

Query: 422 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 481
           EDPYEQELQ+WKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY
Sbjct: 181 EDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 240

Query: 482 Y 483
           Y
Sbjct: 241 Y 241

[Close]

BLAST of Carg06108 vs. NCBI nr
Match: XP_022990181.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 6.6e-124
Identity = 233/241 (96.68%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 242 LAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 301
           +AMASP IPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI
Sbjct: 1   MAMASP-IPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 302 GGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 361
           GGPTPSQSRRDQKEQ    NNNALGPS  DLLNNSSDSHYQFLGVGAEADLEEIKSAYRR
Sbjct: 61  GGPTPSQSRRDQKEQ----NNNALGPSFADLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 120

Query: 362 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 421
           LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL
Sbjct: 121 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 180

Query: 422 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 481
           EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY
Sbjct: 181 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 236

Query: 482 Y 483
           Y
Sbjct: 241 Y 236

[Close]

BLAST of Carg06108 vs. ExPASy Swiss-Prot
Match: Q9SMS0 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-69
Identity = 137/217 (63.13%), Postives = 169/217 (77.88%), Query Frame = 0


Query: 267 RTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPTPSQSRRDQKEQNNNNNNNALG 326
           R   +YASQ P    +P PGVDTRIHW++ +EGWIGG      R D  +  + +  N L 
Sbjct: 39  RVTRIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGG------RSDPAKSVDEDKTNLLS 98

Query: 327 -PSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKL 386
                +L+ +S DSHYQFLGV  +ADLEEIKSAYRRLSKEYHPDTTSLPLK AS+KFMKL
Sbjct: 99  DEKFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKL 158

Query: 387 KQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGR 446
           ++VY VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GR
Sbjct: 159 REVYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGR 218

Query: 447 NMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           NM+LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 NMELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of Carg06108 vs. ExPASy Swiss-Prot
Match: Q75VW3 (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-10
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 340 HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 399
           +YQ LGV  +A  EEIK AYRRL+KEYHPD ++   + AS+KF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 400 FYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTP 437
            YD  L   +     D +   ++D  E   Q  + +P
Sbjct: 66  EYDRILKSGDEKSYRDFMEY-IQDFLESIWQGMRRSP 99

[Close]

BLAST of Carg06108 vs. ExPASy Swiss-Prot
Match: Q5N0G1 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-10
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 340 HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 399
           +YQ LGV  +AD +EIK AYRRL+++YHPD    P   A DKF ++ + YEVLS  E+R 
Sbjct: 5   YYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEP--GAEDKFKEINRAYEVLSEPETRA 64

Query: 400 FYD 403
            YD
Sbjct: 65  RYD 65

[Close]

BLAST of Carg06108 vs. ExPASy Swiss-Prot
Match: Q5KWZ8 (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 340 HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 399
           +Y+ LGV   A  +EIK AYR+LSK+YHPD    P   A++KF ++K+ YEVLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 400 FYD 403
            YD
Sbjct: 66  RYD 66

[Close]

BLAST of Carg06108 vs. ExPASy Swiss-Prot
Match: Q45552 (Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.1e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 340 HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 399
           +Y+ LGV   A  EEIK AYR+LSK+YHPD    P   A++KF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 400 FYD 403
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of Carg06108 vs. ExPASy TrEMBL
Match: A0A6J1HJ56 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464036 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-130
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 244 MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 303
           MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG
Sbjct: 1   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 60

Query: 304 PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 363
           PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS
Sbjct: 61  PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 120

Query: 364 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 423
           KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED
Sbjct: 121 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 424 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY
Sbjct: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 239

[Close]

BLAST of Carg06108 vs. ExPASy TrEMBL
Match: A0A6J1JM84 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487152 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 3.2e-124
Identity = 233/241 (96.68%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 242 LAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 301
           +AMASP IPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI
Sbjct: 1   MAMASP-IPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 302 GGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 361
           GGPTPSQSRRDQKEQ    NNNALGPS  DLLNNSSDSHYQFLGVGAEADLEEIKSAYRR
Sbjct: 61  GGPTPSQSRRDQKEQ----NNNALGPSFADLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 120

Query: 362 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 421
           LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL
Sbjct: 121 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 180

Query: 422 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 481
           EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY
Sbjct: 181 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 236

Query: 482 Y 483
           Y
Sbjct: 241 Y 236

[Close]

BLAST of Carg06108 vs. ExPASy TrEMBL
Match: A0A5D3BJW7 (NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002250 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 197/240 (82.08%), Postives = 212/240 (88.33%), Query Frame = 0


Query: 244 MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 303
           MAS   PNSL  ++TFHSPA  FRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 304 GPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRL 363
           G      ++ +    NN +NN LGPSL DLLNNSSDSHYQFLGVGAEA++EEIKSAYRRL
Sbjct: 61  G------KKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRL 120

Query: 364 SKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 423
           SKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE
Sbjct: 121 SKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 180

Query: 424 DPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           DPYEQELQNW+STPDMVDRL GRNM+LSDQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 DPYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of Carg06108 vs. ExPASy TrEMBL
Match: A0A1S3CHS6 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501040 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 197/240 (82.08%), Postives = 212/240 (88.33%), Query Frame = 0


Query: 244 MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 303
           MAS   PNSL  ++TFHSPA  FRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 304 GPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRL 363
           G      ++ +    NN +NN LGPSL DLLNNSSDSHYQFLGVGAEA++EEIKSAYRRL
Sbjct: 61  G------KKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRL 120

Query: 364 SKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 423
           SKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE
Sbjct: 121 SKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 180

Query: 424 DPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           DPYEQELQNW+STPDMVDRL GRNM+LSDQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 DPYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of Carg06108 vs. ExPASy TrEMBL
Match: A0A0A0LT25 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.2e-101
Identity = 198/242 (81.82%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 244 MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 303
           MASP  PNSL  ++TFHS A TFRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 304 GPTPSQSRRDQKEQNNNNN--NNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYR 363
                   R +KE N+ NN  NN LGPSL DLLNNSSDSHYQFLGV AEA++EEIKSAYR
Sbjct: 61  --------RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYR 120

Query: 364 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 423
           RLSKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+K
Sbjct: 121 RLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMK 180

Query: 424 LEDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 483
           LEDPYEQELQNW STPDMVDRL GRN++LSDQA+TALTLDI IILFAI CIVYVLLFKEP
Sbjct: 181 LEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEP 234

[Close]

BLAST of Carg06108 vs. TAIR 10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 9.0e-71
Identity = 137/217 (63.13%), Postives = 169/217 (77.88%), Query Frame = 0


Query: 267 RTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPTPSQSRRDQKEQNNNNNNNALG 326
           R   +YASQ P    +P PGVDTRIHW++ +EGWIGG      R D  +  + +  N L 
Sbjct: 39  RVTRIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGG------RSDPAKSVDEDKTNLLS 98

Query: 327 -PSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKL 386
                +L+ +S DSHYQFLGV  +ADLEEIKSAYRRLSKEYHPDTTSLPLK AS+KFMKL
Sbjct: 99  DEKFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKL 158

Query: 387 KQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGR 446
           ++VY VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GR
Sbjct: 159 REVYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGR 218

Query: 447 NMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 483
           NM+LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 NMELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of Carg06108 vs. TAIR 10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 240.0 bits (611), Expect = 4.0e-63
Identity = 123/158 (77.85%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 35  SSLSWASSFPSISLSRGSPFVSSNPAHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDM 94
           S++SW SSFP +S+  GS  V S+P   K  F+Q+AWTRRSRGEAAKRPN+KSWKQRTDM
Sbjct: 29  SAVSWQSSFPKLSIEIGS--VISSPIVKKDSFVQAAWTRRSRGEAAKRPNRKSWKQRTDM 88

Query: 95  YMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIA 154
           YMRPFLLNVFFS+KFIHAKVMHR TSKVISVATTNA+D+R ++PSL D+ ACR+IGKLIA
Sbjct: 89  YMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIA 148

Query: 155 ERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGII 193
           ERS EADVYA+SYEPRK ERIEGKLGIVIDTIKE+GII
Sbjct: 149 ERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGII 184

[Close]

BLAST of Carg06108 vs. TAIR 10
Match: AT1G08845.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-23
Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 80  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLP 139
           +K P+K  S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+KD++  L 
Sbjct: 70  SKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLR 129

Query: 140 SLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGIIV 194
           S  D  AC  IG++++ER+KEADVY  SY PR  ++ EGK+  V+ ++ +NGI V
Sbjct: 130 SRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDV 184

[Close]

BLAST of Carg06108 vs. TAIR 10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-23
Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 80  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLP 139
           +K P+K  S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+KD++  L 
Sbjct: 115 SKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLR 174

Query: 140 SLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGIIV 194
           S  D  AC  IG++++ER+KEADVY  SY PR  ++ EGK+  V+ ++ +NGI V
Sbjct: 175 SRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDV 229

[Close]

BLAST of Carg06108 vs. TAIR 10
Match: AT3G22450.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 86.7 bits (213), Expect = 5.7e-17
Identity = 44/113 (38.94%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 81  KRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSL 140
           KR    ++ Q T  +  PF L+++ SK+ + A V+HR TSKV++VA + +KD++  L S 
Sbjct: 180 KRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSR 239

Query: 141 TDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGIIV 194
            +  AC  +G ++A+RS E D++ + Y PRK ++IEGKL +V+  + +NG+ V
Sbjct: 240 RNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNV 292

The following BLAST results are available for this feature:

BLAST of Carg06108 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033427.1	6.5e-265	100.00	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6602740.1	4.0e-254	97.10	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argy...	[more]
XP_022963850.1	6.1e-130	100.00	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata]	[more]
XP_023521950.1	8.9e-129	98.34	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022990181.1	6.6e-124	96.68	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita maxima]	[more]

BLAST of Carg06108 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMS0	1.3e-69	63.13	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q75VW3	1.7e-10	41.24	Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12...	[more]
Q5N0G1	3.0e-10	52.38	Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG...	[more]
Q5KWZ8	3.9e-10	50.79	Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=...	[more]
Q45552	5.1e-10	50.79	Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV...	[more]

BLAST of Carg06108 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ56	3.0e-130	100.00	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX...	[more]
A0A6J1JM84	3.2e-124	96.68	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A5D3BJW7	2.4e-103	82.08	NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CHS6	2.4e-103	82.08	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0LT25	2.2e-101	81.82	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1	[more]

BLAST of Carg06108 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09350.1	9.0e-71	63.13	Chaperone DnaJ-domain superfamily protein	[more]
AT3G20230.1	4.0e-63	77.85	Ribosomal L18p/L5e family protein	[more]
AT1G08845.1	3.1e-23	47.83	Ribosomal L18p/L5e family protein	[more]
AT1G08845.2	3.1e-23	47.83	Ribosomal L18p/L5e family protein	[more]
AT3G22450.1	5.7e-17	38.94	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 375..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..332
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 88..191 e-value: 7.92957E-17 score: 74.1135
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 95..191
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 359..374 score: 43.45 coord: 341..359 score: 48.1 coord: 377..397 score: 35.13
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 338..397 e-value: 2.3E-18 score: 77.0
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 340..402 e-value: 3.8E-19 score: 68.6
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 339..405 score: 18.029549
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 340..394 e-value: 1.84446E-17 score: 74.1189
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 52..196 e-value: 1.0E-15 score: 59.9
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 93..191 e-value: 3.0E-8 score: 34.0
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 328..423 e-value: 3.6E-20 score: 74.1
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 268..401
IPR044618	NAD(P)H-quinone oxidoreductase subunit T-like	PANTHER	PTHR45283	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC	coord: 244..481
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 382..401

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06108-RA	Carg06108-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome