Carg06059 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06059
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Carg_Chr04: 21721146 .. 21722125 (-)
RNA-Seq Expression	Carg06059
Synteny	Carg06059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGACATGTGCCCGCCATTGCCCTCCAGTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCGGAACCGGAGAATCTCTGCACCCTGCATTTCGTTTCCATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCATCTCTTTCATTCACGCCTTCGCCGTCCTCCTCGTCCTCCGCTGACGACGACTTCAACAACCCCTGCACTGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAGTTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCAATTCCGAATTCCCATCTCCGATCACTGATTGGAGACGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGGAAATACAACAACCAGTTCGAGGGGAGAAACAATCGCCGCCGGACCTCTCTTCCGAAAAGCATCTCCGTCCGCTCTGCAGCTGCCTCCGCCGCCCCACTCAACATCCAGTCGGTAGAATTTCTCAACTTTTATCTTTATTTGTTTGAAATTATGTATTATTTAAAAACGTAATTAATAATAATACTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGCTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTTACCCACCACCAGTAG

mRNA sequence

ATGGAAGACGACATGTGCCCGCCATTGCCCTCCAGTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCGGAACCGGAGAATCTCTGCACCCTGCATTTCGTTTCCATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCATCTCTTTCATTCACGCCTTCGCCGTCCTCCTCGTCCTCCGCTGACGACGACTTCAACAACCCCTGCACTGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAGTTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCAATTCCGAATTCCCATCTCCGATCACTGATTGGAGACGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGGAAATACAACAACCAGTTCGAGGGGAGAAACAATCGCCGCCGGACCTCTCTTCCGAAAAGCATCTCCGTCCGCTCTGCAGCTGCCTCCGCCGCCCCACTCAACATCCAGTCGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGCTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTTACCCACCACCAGTAG

Coding sequence (CDS)

ATGGAAGACGACATGTGCCCGCCATTGCCCTCCAGTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCGGAACCGGAGAATCTCTGCACCCTGCATTTCGTTTCCATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCATCTCTTTCATTCACGCCTTCGCCGTCCTCCTCGTCCTCCGCTGACGACGACTTCAACAACCCCTGCACTGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAGTTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCAATTCCGAATTCCCATCTCCGATCACTGATTGGAGACGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGGAAATACAACAACCAGTTCGAGGGGAGAAACAATCGCCGCCGGACCTCTCTTCCGAAAAGCATCTCCGTCCGCTCTGCAGCTGCCTCCGCCGCCCCACTCAACATCCAGTCGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGCTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTTACCCACCACCAGTAG

Protein sequence

MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNNQFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ

Homology

[Close]

BLAST of Carg06059 vs. NCBI nr
Match: KAG7033379.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.0 bits (1543), Expect = 2.3e-167
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60
           MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS
Sbjct: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60

Query: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120
           SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN
Sbjct: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120

Query: 121 AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN 180
           AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN
Sbjct: 121 AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN 180

Query: 181 QFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240
           QFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE
Sbjct: 181 QFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240

Query: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 299
           SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ
Sbjct: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 298

[Close]

BLAST of Carg06059 vs. NCBI nr
Match: KAG6602692.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 588.2 bits (1515), Expect = 4.0e-164
Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60
           MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS
Sbjct: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60

Query: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120
           SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN
Sbjct: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120

Query: 121 AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN 180
           AQLQLANA+LIKILSSKTAVDDLVAIPNSHLRSLI DGQNGEEVGYEIISPTSVIRKYNN
Sbjct: 121 AQLQLANAKLIKILSSKTAVDDLVAIPNSHLRSLIRDGQNGEEVGYEIISPTSVIRKYNN 180

Query: 181 QFEGRNNRRRTSLPKSISVRSAAAS--AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKW 240
           QF+GRNNRRRTSLPKSISVRSAAAS  AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKW
Sbjct: 181 QFDGRNNRRRTSLPKSISVRSAAASAAAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKW 240

Query: 241 EESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 299
           EESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ
Sbjct: 241 EESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 300

[Close]

BLAST of Carg06059 vs. NCBI nr
Match: XP_023552705.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.4 bits (1474), Expect = 2.3e-159
Identity = 289/300 (96.33%), Postives = 294/300 (98.00%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTP-SPSS 60
           MEDDMCPPLPS+LSSTAEASPNSP+PENLC+LHFVSMYHSIFPPLLSSSSLSFTP S SS
Sbjct: 1   MEDDMCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSS 60

Query: 61  SSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRE 120
           SSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRE
Sbjct: 61  SSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRE 120

Query: 121 NAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYN 180
           NAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIG+GQNGEEVGYEIISPTSVIRKYN
Sbjct: 121 NAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYN 180

Query: 181 NQFEGRNNRRRTSLPKSISVRSAAAS---AAPLNIQSRRVCGPVELEVYKQGMEKTELCK 240
           NQ EGRNNRRRTSLPKSISVRSAAAS   AAPLNIQSRRVCGPVELEVYKQGMEKTE+CK
Sbjct: 181 NQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSRRVCGPVELEVYKQGMEKTEVCK 240

Query: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 297
           KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 300

[Close]

BLAST of Carg06059 vs. NCBI nr
Match: XP_022956786.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 570.9 bits (1470), Expect = 6.6e-159
Identity = 286/297 (96.30%), Postives = 292/297 (98.32%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60
           MEDDMCPPLPSSLSS+AEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLS TPSP  S
Sbjct: 1   MEDDMCPPLPSSLSSSAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSLTPSP--S 60

Query: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120
           SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN
Sbjct: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120

Query: 121 AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN 180
           AQL+LANAELI+ILSSKTAVDDLV IPNSHL+SLIG+GQNGEEVGYEIISPTSVIRKYNN
Sbjct: 121 AQLRLANAELIEILSSKTAVDDLVGIPNSHLQSLIGEGQNGEEVGYEIISPTSVIRKYNN 180

Query: 181 QFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240
           QF+GRNNRRRTSLPKSISVRSAAA AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE
Sbjct: 181 QFDGRNNRRRTSLPKSISVRSAAA-AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240

Query: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH 298
           SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH
Sbjct: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH 294

[Close]

BLAST of Carg06059 vs. NCBI nr
Match: XP_022991105.1 (zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-151
Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSP--S 60
           MEDDMCPPLPSSLSSTAEASPNSPEPENLC+LHFVSMYHSIFPPLLSSSSLSFTPSP  S
Sbjct: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60

Query: 61  SSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRR 120
           SSSSADDDFNNPCTA PTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCL+R
Sbjct: 61  SSSSADDDFNNPCTATPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLQR 120

Query: 121 ENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKY 180
           ENAQL+LANAELIKILSSKTAVDD        L+SLIG GQNGEEVGYEIISPTSVIRKY
Sbjct: 121 ENAQLRLANAELIKILSSKTAVDD--------LQSLIGGGQNGEEVGYEIISPTSVIRKY 180

Query: 181 NNQFEGRNNRRRTSLPKSISVRSAAAS--AAPLNIQSRRVCGPVELEVYKQGMEKTELCK 240
           N+QF+GRNNRRRTSLPKSISVRSAAAS  AAPLNIQSRRVCGPVELEVYKQGM KTELCK
Sbjct: 181 NSQFDGRNNRRRTSLPKSISVRSAAASAAAAPLNIQSRRVCGPVELEVYKQGMAKTELCK 240

Query: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 297
           KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 292

[Close]

BLAST of Carg06059 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-50
Identity = 126/317 (39.75%), Postives = 175/317 (55.21%), Query Frame = 0


Query: 10  PSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSSADDDFNN 69
           P  LS  +E S N+   E      F S+Y+SIF P       S +PSP SSSS     + 
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP------ESLSPSPPSSSSPPSRVD- 81

Query: 70  PCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAE 129
                  +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N++
Sbjct: 82  -------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENSD 141

Query: 130 LIKIL----SSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNNQFEGR 189
           L+K++    SS ++V     I N   R  I D ++ +                      R
Sbjct: 142 LLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK----------------------R 201

Query: 190 NNRRRTSLPKSISVR------------------------SAAASAAPLNIQSRRVCGPVE 249
           NN+ R SLPKSISVR                        S ++S     +Q++     +E
Sbjct: 202 NNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNSVSSSQKVCVVQTKGEREALE 261

Query: 250 LEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEK 299
           LEVY+QGM KTELC KW+E+G C YG++C+FAHG++ELRPVIRHPRYKT++CRM+++G  
Sbjct: 262 LEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAM 301

[Close]

BLAST of Carg06059 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-41
Identity = 110/277 (39.71%), Postives = 146/277 (52.71%), Query Frame = 0


Query: 52  SFTPSPSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTD 111
           SF+   SSS S  DD +    A   + T+  L  A L L+++E+  R +LCL  L    D
Sbjct: 66  SFSHCSSSSDSVVDDGDG---AGAAAATEHRLHLAHLALQYQEMANRFELCLSHLADAAD 125

Query: 112 DVDCLRRENAQLQLANAEL-IKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIIS 171
           +   LR+ENA+L++AN +L  +I          +A+     R  +   Q    +     S
Sbjct: 126 EAAALRQENAELRVANNDLACRIAKFGGRQSSAIALAGDLRRLRLPKEQTVPALPPPPQS 185

Query: 172 PTSVIRKYNNQFEGRNNRRRTSLPKSISVRSAAAS----------AAPLNIQSRRV---- 231
           P + +       E     ++  LPKSIS+RS              + P+N+ S+RV    
Sbjct: 186 PPAALMNPVAVPE-----KQAVLPKSISIRSTGYQKLNQGGKHRVSKPVNVGSQRVFVGI 245

Query: 232 ------------------CGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEE 291
                              G +E EVY QGM KTELC KWEE+G CPYG+ C+FAHGV E
Sbjct: 246 DGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELCNKWEETGACPYGDQCQFAHGVAE 305

Query: 292 LRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 296
           LRPVIRHPRYKTQ+CRMVL+G  C YGHRCHFRHS+T
Sbjct: 306 LRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSIT 334

[Close]

BLAST of Carg06059 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-41
Identity = 125/326 (38.34%), Postives = 167/326 (51.23%), Query Frame = 0


Query: 13  LSSTAEASPNSPEPENLCTLHFVSMYHSIFP-PLLSSSSLSFTPSPSSSSSADDDFNNPC 72
           L+S+    P+  +    C+  F   +    P PL +S SL    SPSSS+S  DD ++  
Sbjct: 25  LASSPRYLPSGDDALYRCSSPFSPSFGFSSPSPLATSVSL----SPSSSASLVDDGDDGG 84

Query: 73  TAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAEL- 132
            AA    T   L  ARL L+++E+  R++LCL  L +  ++   LR ENA+L++ N++L 
Sbjct: 85  AAA--DATGQRLQLARLALQYQEVADRYELCLSHLAEAAEEAAALRLENAELRVTNSDLA 144

Query: 133 --IKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNNQFEGRNNR 192
             + +LS K      VA+ +   R  +G+                  +K     + R   
Sbjct: 145 LRLALLSGKHTA--AVAVADEIRRLRLGE------------------QKVAAATKERTPE 204

Query: 193 RRTSLPKSISVRS------------AAASAAPLNIQSRRVCGP----------------- 252
           +   LPKSISVRS            A A++A  N + R    P                 
Sbjct: 205 KLAVLPKSISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPPNSQRAYDGGKKGD 264

Query: 253 ----------VELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYK 296
                      ELEVY QGM KTELC KWEE+G CPYG+ C+FAHGV ELRPVIRHPRYK
Sbjct: 265 EQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELRPVIRHPRYK 324

[Close]

BLAST of Carg06059 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-37
Identity = 105/283 (37.10%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 58  SSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQVTDDVDCL 117
           S S S+  + ++    + +  +D L    R I++ R ++  R  LC  RL + + + + L
Sbjct: 9   SYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAEAL 68

Query: 118 RRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGDGQNGEEVGYE--IIS 177
           R EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV  +   ++
Sbjct: 69  RLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVENQNRTVN 128

Query: 178 PTSVIRKYNNQFEGRNNRRRTSLPKSISVRS-------------AAASAAPL-NIQSRRV 237
              V  K         +  R+SLPKSISVRS             AA S  P   +     
Sbjct: 129 RDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRGTVTKPGT 188

Query: 238 CGPV---------------------ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHG 297
           CG V                     E+EVY QGM KTELC KW+E+G CPYG+HC+FAHG
Sbjct: 189 CGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQFAHG 248

Query: 298 VEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 299
           ++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+  +
Sbjct: 249 IKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQE 291

[Close]

BLAST of Carg06059 vs. ExPASy Swiss-Prot
Match: Q10MN8 (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301500 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27
Identity = 95/274 (34.67%), Postives = 131/274 (47.81%), Query Frame = 0


Query: 42  FPPLLSSSSLS---FTPSPSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQR 101
           FP L  +SSL     +PS   S      +++P  A+     +  + +A ++L  R + +R
Sbjct: 181 FPSLPWASSLEKPLTSPSSCVSDGRSGGYSSPLGASAERERE--VREAEMLL--RAIAER 240

Query: 102 HDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKIL----SSKTAVDDLVAIPNSHLRSL 161
           +D C  RLR    ++  L RE  +L   N  L  +L    S +      +A P       
Sbjct: 241 YDDCFLRLRDAAAELSDLHRERLRLAAENLHLSLLLEELESEQRKQASAMAPPKLEEDEA 300

Query: 162 IGDGQNGEEVGYEIISPTSVIRKYNNQFEGRNNRRRTSLPKSISVR-------------- 221
               Q G      I SP  + +K   Q + R  R R    +++ +               
Sbjct: 301 ---AQGGAPKSISIRSPGYLSQK-PPQGQARPQRLRVRASQAMEISHPNCLIFVMGNQCS 360

Query: 222 -SAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEEL 281
              AA+A     +  +  G VE+E Y+QG  KTELC KWE  G CPYG  CRFAHG++EL
Sbjct: 361 PKEAAAAGDEEDEEDKGGGEVEVEAYRQGAAKTELCNKWER-GACPYGARCRFAHGLQEL 420

Query: 282 RPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHS 294
           RPVIRHPRYKT  C+M  +   C YGHRCHFRHS
Sbjct: 421 RPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHS 445

[Close]

BLAST of Carg06059 vs. ExPASy TrEMBL
Match: A0A6J1GXH1 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111458383 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 3.2e-159
Identity = 286/297 (96.30%), Postives = 292/297 (98.32%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60
           MEDDMCPPLPSSLSS+AEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLS TPSP  S
Sbjct: 1   MEDDMCPPLPSSLSSSAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSLTPSP--S 60

Query: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120
           SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN
Sbjct: 61  SSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRREN 120

Query: 121 AQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNN 180
           AQL+LANAELI+ILSSKTAVDDLV IPNSHL+SLIG+GQNGEEVGYEIISPTSVIRKYNN
Sbjct: 121 AQLRLANAELIEILSSKTAVDDLVGIPNSHLQSLIGEGQNGEEVGYEIISPTSVIRKYNN 180

Query: 181 QFEGRNNRRRTSLPKSISVRSAAASAAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240
           QF+GRNNRRRTSLPKSISVRSAAA AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE
Sbjct: 181 QFDGRNNRRRTSLPKSISVRSAAA-AAPLNIQSRRVCGPVELEVYKQGMEKTELCKKWEE 240

Query: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH 298
           SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH
Sbjct: 241 SGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHH 294

[Close]

BLAST of Carg06059 vs. ExPASy TrEMBL
Match: A0A6J1JRY1 (zinc finger CCCH domain-containing protein 14-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487801 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0


Query: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSP--S 60
           MEDDMCPPLPSSLSSTAEASPNSPEPENLC+LHFVSMYHSIFPPLLSSSSLSFTPSP  S
Sbjct: 1   MEDDMCPPLPSSLSSTAEASPNSPEPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSPSSS 60

Query: 61  SSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRR 120
           SSSSADDDFNNPCTA PTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCL+R
Sbjct: 61  SSSSADDDFNNPCTATPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLQR 120

Query: 121 ENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKY 180
           ENAQL+LANAELIKILSSKTAVDD        L+SLIG GQNGEEVGYEIISPTSVIRKY
Sbjct: 121 ENAQLRLANAELIKILSSKTAVDD--------LQSLIGGGQNGEEVGYEIISPTSVIRKY 180

Query: 181 NNQFEGRNNRRRTSLPKSISVRSAAAS--AAPLNIQSRRVCGPVELEVYKQGMEKTELCK 240
           N+QF+GRNNRRRTSLPKSISVRSAAAS  AAPLNIQSRRVCGPVELEVYKQGM KTELCK
Sbjct: 181 NSQFDGRNNRRRTSLPKSISVRSAAASAAAAPLNIQSRRVCGPVELEVYKQGMAKTELCK 240

Query: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 297
           KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 241 KWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTH 292

[Close]

BLAST of Carg06059 vs. ExPASy TrEMBL
Match: A0A0A0LQS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404980 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 8.9e-109
Identity = 221/315 (70.16%), Postives = 252/315 (80.00%), Query Frame = 0


Query: 1   MEDDMCPP-LPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSS----SLSFTP 60
           ME++MCPP LPS+LS+T E S  + E E+    HF SMYHSIFPPLLSSS    SLSFTP
Sbjct: 31  MEEEMCPPLLPSTLSTTTELS--AVEYEDF-GHHFASMYHSIFPPLLSSSSLPNSLSFTP 90

Query: 61  SPSSSSSADDDFNNPCTA-APTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVD 120
           SP   SSADDD NN CT  A TSTTDDLLFQARLILE+R L  RHDLCLRRLRQV +D D
Sbjct: 91  SP---SSADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDAD 150

Query: 121 CLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSV 180
            LR+ENAQL+LANAEL+K++SSKTAVDDLV+IPNSHLR+LIG GQ+G+E+GY++ISPTSV
Sbjct: 151 YLRQENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSV 210

Query: 181 IRKYNNQFEGRNNRRRTSLPKSISVRS-AAASAAPLNIQSRRVCGPV------------- 240
           I KYN+QF+GRNN RR SLP+SISVRS AAAS+  LNI+SR    PV             
Sbjct: 211 IGKYNDQFDGRNNLRRNSLPRSISVRSAAAASSVQLNIKSRGASTPVSDGGSRKREEEAT 270

Query: 241 ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGE 296
           E EVY QG  KTELC KW+E G CPYG HCRFAHG+EELRPV+RHPRYKTQ+CRMVL+GE
Sbjct: 271 EFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGE 330

[Close]

BLAST of Carg06059 vs. ExPASy TrEMBL
Match: A0A1S3B3V9 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103485461 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 222/317 (70.03%), Postives = 250/317 (78.86%), Query Frame = 0


Query: 1   MEDDMCPP-LPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSS----SLSFTP 60
           ME++MCPP LPSSLSST E S    E     + HF SMYHSIFPPLLSSS    SLSFTP
Sbjct: 1   MEEEMCPPLLPSSLSSTTELSVAEFED---FSQHFASMYHSIFPPLLSSSSLPNSLSFTP 60

Query: 61  SPSSSSSADDDFNNPC-TAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVD 120
           SP   SSADDD NN C TA  TSTTDDLL QARLILE+R L  RHDLCLRRLRQV+DD D
Sbjct: 61  SP---SSADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDAD 120

Query: 121 CLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGY-EIISPTS 180
            LR+ENAQL+LANAEL+K++SSKTA+DDLV+IPNSHLRSLIG GQ+G+E+GY +IISPTS
Sbjct: 121 YLRQENAQLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTS 180

Query: 181 VIRKYNNQFEGRNNRRRTSLPKSISVRS--AAASAAPLNIQSRRVCGPV----------- 240
           VI KYN+QF+GRNN  R SLPKSIS+RS  AAAS+AP NI+ R  C PV           
Sbjct: 181 VIGKYNDQFDGRNNLHRISLPKSISIRSAAAAASSAPPNIKLRGACTPVSDGGSRKREEE 240

Query: 241 --ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLS 296
             E EVY QG  KTELC KW+E G CPYG HCRFAHG+EELRPV+RHPRYKTQ+CRMVL+
Sbjct: 241 ATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLA 300

[Close]

BLAST of Carg06059 vs. ExPASy TrEMBL
Match: A0A5D3BUE0 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00430 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 222/317 (70.03%), Postives = 250/317 (78.86%), Query Frame = 0


Query: 1   MEDDMCPP-LPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSS----SLSFTP 60
           ME++MCPP LPSSLSST E S    E     + HF SMYHSIFPPLLSSS    SLSFTP
Sbjct: 1   MEEEMCPPLLPSSLSSTTELSVAEFED---FSQHFASMYHSIFPPLLSSSSLPNSLSFTP 60

Query: 61  SPSSSSSADDDFNNPC-TAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVD 120
           SP   SSADDD NN C TA  TSTTDDLL QARLILE+R L  RHDLCLRRLRQV+DD D
Sbjct: 61  SP---SSADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDAD 120

Query: 121 CLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGY-EIISPTS 180
            LR+ENAQL+LANAEL+K++SSKTA+DDLV+IPNSHLRSLIG GQ+G+E+GY +IISPTS
Sbjct: 121 YLRQENAQLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTS 180

Query: 181 VIRKYNNQFEGRNNRRRTSLPKSISVRS--AAASAAPLNIQSRRVCGPV----------- 240
           VI KYN+QF+GRNN  R SLPKSIS+RS  AAAS+AP NI+ R  C PV           
Sbjct: 181 VIGKYNDQFDGRNNLHRISLPKSISIRSAAAAASSAPPNIKLRGACTPVSDGGSRKREEE 240

Query: 241 --ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLS 296
             E EVY QG  KTELC KW+E G CPYG HCRFAHG+EELRPV+RHPRYKTQ+CRMVL+
Sbjct: 241 ATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLA 300

[Close]

BLAST of Carg06059 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 199.9 bits (507), Expect = 2.9e-51
Identity = 126/317 (39.75%), Postives = 175/317 (55.21%), Query Frame = 0


Query: 10  PSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSSADDDFNN 69
           P  LS  +E S N+   E      F S+Y+SIF P       S +PSP SSSS     + 
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP------ESLSPSPPSSSSPPSRVD- 81

Query: 70  PCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAE 129
                  +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N++
Sbjct: 82  -------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENSD 141

Query: 130 LIKIL----SSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNNQFEGR 189
           L+K++    SS ++V     I N   R  I D ++ +                      R
Sbjct: 142 LLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK----------------------R 201

Query: 190 NNRRRTSLPKSISVR------------------------SAAASAAPLNIQSRRVCGPVE 249
           NN+ R SLPKSISVR                        S ++S     +Q++     +E
Sbjct: 202 NNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNSVSSSQKVCVVQTKGEREALE 261

Query: 250 LEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEK 299
           LEVY+QGM KTELC KW+E+G C YG++C+FAHG++ELRPVIRHPRYKT++CRM+++G  
Sbjct: 262 LEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAM 301

[Close]

BLAST of Carg06059 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 105/282 (37.23%), Postives = 150/282 (53.19%), Query Frame = 0


Query: 58  SSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQVTDDVDCL 117
           S S S+  + ++    + +  +D L    R I++ R ++  R  LC  RL + + + + L
Sbjct: 9   SYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAEAL 68

Query: 118 RRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGDGQNGEEVGYE--IIS 177
           R EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV  +   ++
Sbjct: 69  RLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVENQNRTVN 128

Query: 178 PTSVIRKYNNQFEGRNNRRRTSLPKSISVRS-------------AAASAAPL-NIQSRRV 237
              V  K         +  R+SLPKSISVRS             AA S  P   +     
Sbjct: 129 RDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRGTVTKPGT 188

Query: 238 CGPV--------------------ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGV 297
           CG V                    E+EVY QGM KTELC KW+E+G CPYG+HC+FAHG+
Sbjct: 189 CGQVSTTKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQFAHGI 248

Query: 298 EELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 299
           +ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+  +
Sbjct: 249 KELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQE 290

[Close]

BLAST of Carg06059 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 158.7 bits (400), Expect = 7.3e-39
Identity = 105/283 (37.10%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 58  SSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQVTDDVDCL 117
           S S S+  + ++    + +  +D L    R I++ R ++  R  LC  RL + + + + L
Sbjct: 9   SYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAEAL 68

Query: 118 RRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGDGQNGEEVGYE--IIS 177
           R EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV  +   ++
Sbjct: 69  RLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVENQNRTVN 128

Query: 178 PTSVIRKYNNQFEGRNNRRRTSLPKSISVRS-------------AAASAAPL-NIQSRRV 237
              V  K         +  R+SLPKSISVRS             AA S  P   +     
Sbjct: 129 RDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRGTVTKPGT 188

Query: 238 CGPV---------------------ELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHG 297
           CG V                     E+EVY QGM KTELC KW+E+G CPYG+HC+FAHG
Sbjct: 189 CGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQFAHG 248

Query: 298 VEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHHQ 299
           ++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+  +
Sbjct: 249 IKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQE 291

[Close]

BLAST of Carg06059 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 49.3 bits (116), Expect = 6.3e-06
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 0


Query: 231 KTELCKKWEESGGCPYGEHCRFAHGVEEL 260
           KT +C KW+ +G CP+G HC FAHG  EL
Sbjct: 145 KTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of Carg06059 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 18/38 (47.37%), Postives = 24/38 (63.16%), Query Frame = 0


Query: 222 LEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEEL 260
           +++ K    KT +C KWE +G CP+G  C FAHG  EL
Sbjct: 253 IQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

The following BLAST results are available for this feature:

BLAST of Carg06059 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033379.1	2.3e-167	100.00	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
KAG6602692.1	4.0e-164	98.33	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
XP_023552705.1	2.3e-159	96.33	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956786.1	6.6e-159	96.30	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata]	[more]
XP_022991105.1	3.0e-151	93.00	zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg06059 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9N3	4.0e-50	39.75	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L5G1	2.0e-41	39.71	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX...	[more]
A2ZVY5	2.0e-41	38.34	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=...	[more]
Q9C9F5	1.0e-37	37.10	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q10MN8	2.8e-27	34.67	Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja...	[more]

BLAST of Carg06059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXH1	3.2e-159	96.30	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JRY1	1.4e-151	93.00	zinc finger CCCH domain-containing protein 14-like isoform X1 OS=Cucurbita maxim...	[more]
A0A0A0LQS7	8.9e-109	70.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404980 PE=4 SV=1	[more]
A0A1S3B3V9	1.2e-108	70.03	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3BUE0	1.2e-108	70.03	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Carg06059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66810.1	2.9e-51	39.75	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	5.6e-39	37.23	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	7.3e-39	37.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G35430.1	6.3e-06	58.62	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	1.1e-05	47.37	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..133
None	No IPR available	GENE3D	4.10.1000.10		coord: 225..262 e-value: 1.7E-16 score: 61.3 coord: 263..296 e-value: 1.0E-7 score: 33.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73
None	No IPR available	PANTHER	PTHR12547:SF139	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 50..297
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 50..297
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 267..294 e-value: 0.047 score: 22.8 coord: 229..256 e-value: 2.5E-8 score: 43.6
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 231..255 e-value: 1.3E-10 score: 40.9
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 229..257 score: 15.966729
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 267..295 score: 12.61482
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 263..295
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 227..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06059-RA	Carg06059-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding