Carg05981 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05981
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein yippee-like
Location	Carg_Chr04: 21400741 .. 21403755 (-)
RNA-Seq Expression	Carg05981
Synteny	Carg05981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAATTTAGGAGTGAAAAAAAGGGAAGAGGAAAAGTTGATTGCATTAGCATTTAGCATCCACATGGCATTGGGTTAAGGGGGAGGGACCGTCTTTCACAGGGAAAGTGGTATTTATAGTTGGCGAGACATGGCCAAGCTTCTTCTGTGTGCATATTTCTTGTAACTGAGAACACAGGTAAAGTTCCATTTTGATTCTCTTTTTCTTCCCTTTCTTTCTTGCTTCTCACTTCATTCTTCCTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTAGCTACTCAGTTTCTGATCTCCGATTTCTCCATTTTCGATTATTTTTATGAGATTTCGTAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTCATTCACAATAACTCTTCATTTCTGATTTCTGATTTCATTGTTTCTCTCAATTTTTCGTAAATTTTCCGATGCGGATGAGAATATTGACTAACCCTTTAATATTGTAACAAAAATATGGTGCTGGACTGTTGAAATTGTTGTTGTTGTTGTTAGGGGCTGTTCTTAACTTGATGATCTCTAAATTTAATTAGAAATTTGATTGAGTATATATGTTGCCTCTATGGCTGCTCTTTGTTGGCTCTACCCTTTGAATGTTCATTTTCAGACTAAACGATTCTAGGAATGTCATTGGAGAAAAGCTTTCTGACTTTATTGTTTCCTGTGTTTGTTTCTATTATTCAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTGTAAGTTTTCGTGGATGATAGTGGTAATTTGGCCAAATGTTTCCATTAAAGATCCCCAATCCCCCTTTTTTTTTTCTTTCCAATCACAGACTAAAAGCACAGGATAAAGCTCAAATCCTAACTTGTTCAATCTCCTCTTTTCATTACCTAACTGCTCCTTTTAAGATGTAGTTTTCCTCTTATCGTTCTGATTCATAACTTTTGTATACATTGCCGCTCTTCCTTCGCTATTGTTTTTGGTTTTTTGTATAATTCAAGTGAATGTGTTCGTCATTTTAGAAGTGAAGGTTCACCGTCTTTTATATGGTGATAAAATTGCTTATTTGTTCATGTTCTCTTTAAGAATTGAGTCTAAACTTGTCTTTTTAAACAGAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTAAGTAATTTTACAGTACCTTGCTTTGAATCATTACTTTTAAGACATGAACTTGCTCTGAAAAGACCATCTTACTTGATCCTAGTTAGGAAAATGATATTATCTGGTTCTTTGAATCAGCTCCTCGTTAATCATTTTGGACAAAAAAGTATTACATGAAGGAGCATGAATTACAATAGATTTGCTATCTCATTATGTGTATATCCCTTTTAACTGTCCAATAATCGAAAAGATACAAATATACCTATCGTGTCGGTGAAATTGGCTACACGTAAGGTGTCCAATCATTTCCTAGCTTATAATATCATTGCTGAAATTGTTCATGATGAACTGATTTGCAAGACTACTGAAAACAACCTCAGAATTTTAGATGTTAAATTATCGTAGCTTAAGCTAGATCGACCAATTAAAAATCATATCTTGAACTATTGAGTCTAGATATATCCTTTTTTCCCCCTCGATTTTTCGTTAGATTACTTCAAATTTCGTTTTAACGTATAATAATTTCATCATCCCCACCCCCACCTAGGTCGTTTGTCGTGGTTGGCTTGCTTTTGTTTTCGTGCTATTTTATGGGGTCCTTTGGTAAGAAAGAAACAGGGCTTGAAGAGAGCTTGGGGTGAGGTAGGGTCCTTTATTAGATTTCATGCATCTCTCTAGGTTTCTGTTCATAAAGCTTTTTGTAATCACCCTTTAGGACTTATTTTGCTTGATTGGAGCTCTTTTTAGGCTCATTCGACGACTCCTCTTGGGGGTGGTATTTCTGTATGCCCCTTGTATTCTTTCATTTGATCTCAATGAAAGCGACTTTTCATCGAAATAACCACAAATTATTCCATATTGCACAAAATCTCATTATCGAGTATAACCGTTCTCGAACGTTCTATTATCACATTGAATTCTTACATTTATATATCTGAGAGGTCTGCAGTGTAGTAGTAGTAAAGTTTTATATAGTAGTAGATCCATGCAGTTGAGAATTTGTGGAAGAAAACTTGCAATGAGTAGTGAAGTAGTGGACATAGAATTAGGCGTATAAGCATTTGTTGTTTGATGAACAGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGATGATGATGATGATGATGATGAAGATGATGCCTACTCCCCTTATTATTCCAAACTGTACATTCTGCTCTTCCAATGTTCATATTCTTCAACTCATTGTTCTTCATCAGTTCCTCATTTCAGCACAGCTACTAAACTTGCTTGCTGCTTTGTAGCCGAACTGGACACATTTCATTGTGATTCTTCTTTAACTTGATGATATTCCTTAACTTTGCAACAGGATGGAATGTTTTTCATTTCAGTTTTGGTCTTCTTTTGCCCCTAATCTTTGTTATTTTGAATTTTGAATTTATTAGTTTGCTTATACCAGTGAATTAATGTAGTGATGATACGACAGACATTAAAACATAATGAAACTGGTAATCTCATAAGTTTTGCTTTTATTTAGACACCTTCAAAAATTGATTGGAAACTTA

mRNA sequence

AAATTAATTTAGGAGTGAAAAAAAGGGAAGAGGAAAAGTTGATTGCATTAGCATTTAGCATCCACATGGCATTGGGTTAAGGGGGAGGGACCGTCTTTCACAGGGAAAGTGGTATTTATAGTTGGCGAGACATGGCCAAGCTTCTTCTGTGTGCATATTTCTTGTAACTGAGAACACAGGAGATTTCGTAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGATGATGATGATGATGATGATGAAGATGATGCCTACTCCCCTTATTATTCCAAACTGTACATTCTGCTCTTCCAATGTTCATATTCTTCAACTCATTGTTCTTCATCAGTTCCTCATTTCAGCACAGCTACTAAACTTGCTTGCTGCTTTGTAGCCGAACTGGACACATTTCATTGTGATTCTTCTTTAACTTGATGATATTCCTTAACTTTGCAACAGGATGGAATGTTTTTCATTTCAGTTTTGGTCTTCTTTTGCCCCTAATCTTTGTTATTTTGAATTTTGAATTTATTAGTTTGCTTATACCAGTGAATTAATGTAGTGATGATACGACAGACATTAAAACATAATGAAACTGGTAATCTCATAAGTTTTGCTTTTATTTAGACACCTTCAAAAATTGATTGGAAACTTA

Coding sequence (CDS)

ATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGA

Protein sequence

MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA

Homology

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BLAST of Carg05981 vs. NCBI nr
Match: KAG7033303.1 (hypothetical protein SDJN02_07358 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 157

[Close]

BLAST of Carg05981 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 134/157 (85.35%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

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BLAST of Carg05981 vs. NCBI nr
Match: KAG6602621.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 134/157 (85.35%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 722 MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 781

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 782 MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 841

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 842 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 855

[Close]

BLAST of Carg05981 vs. NCBI nr
Match: XP_038884693.1 (protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 129/157 (82.17%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHA SHE AHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHAHSHETAHGGGSDADEA 134

[Close]

BLAST of Carg05981 vs. NCBI nr
Match: XP_004138427.1 (protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_005069 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 128/157 (81.53%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE AHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

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BLAST of Carg05981 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-47
Identity = 100/156 (64.10%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV++LEG+IYSCKHC THLAL E+IVSKSF C+HGKAYLF+KVVNVT G  E RMM
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCV CGSIVGW Y                       ETA EK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKY-----------------------ETAHEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADE 157
           SVLERFK++GP G+ YW SH       H  GSDAD+
Sbjct: 121 SVLERFKITGPDGSHYWASHD-----THVAGSDADD 128

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BLAST of Carg05981 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-44
Identity = 94/157 (59.87%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQ RHGKAYLF+KVVNV  G KE RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTV DI+CV CGS VGW Y                       E AFEKNQKYKEGK
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKY-----------------------EFAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KV GP G +YWV+     +    G SD D+A
Sbjct: 121 SVLERYKVWGPDGNNYWVA-----QEVEAGDSDTDDA 129

[Close]

BLAST of Carg05981 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-39
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF C+HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG HTVADIFCV CGS+VGW Y                       E A++K+QKYKEGK
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKY-----------------------EIAYDKSQKYKEGK 113

Query: 121 SVLERFKVSGPGGTSY 137
            +LERFKV GP G  Y
Sbjct: 121 FILERFKVLGPYGGGY 113

[Close]

BLAST of Carg05981 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-36
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F+V LEG IY CK C+THL+  +DI+SKSFQC++G+AYLFN VVNV+VG KE RMM
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG+H V DIFCVGCGS VGW Y                       E A EK+QKYKEGK
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKY-----------------------EFAHEKSQKYKEGK 116

Query: 121 SVLERFKVSGPGGTSYWVS 140
           SVLE +K+SGP  ++  VS
Sbjct: 121 SVLELYKISGPHDSNDLVS 116

[Close]

BLAST of Carg05981 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-31
Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F V LEGR Y C+ CRTHLAL +D+VS+SF CR GKAYLFN+ VN+++G  E R+M
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           ++GMHTVADIFC  CG  VGW Y                       E+A EK QKYKEGK
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKY-----------------------ESAHEKAQKYKEGK 105

Query: 121 SVLERFKV 129
            VLER ++
Sbjct: 121 FVLERGRI 105

[Close]

BLAST of Carg05981 vs. ExPASy TrEMBL
Match: A0A6J1JRQ1 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 134/157 (85.35%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of Carg05981 vs. ExPASy TrEMBL
Match: A0A6J1E6I1 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 134/157 (85.35%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of Carg05981 vs. ExPASy TrEMBL
Match: A0A0A0KBL4 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.0e-64
Identity = 128/157 (81.53%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE AHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]

BLAST of Carg05981 vs. ExPASy TrEMBL
Match: A0A1S3B3I1 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63
Identity = 126/157 (80.25%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK+FQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKTFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE  HGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETGHGGGSDADEA 134

[Close]

BLAST of Carg05981 vs. ExPASy TrEMBL
Match: A0A6J1JR81 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61
Identity = 123/156 (78.85%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLF+KVVNV++GVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFSKVVNVSIGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADE 157
           SVLER KVSGPGGTSYWVSHA  HE AHGGGSDADE
Sbjct: 121 SVLERSKVSGPGGTSYWVSHAHGHETAHGGGSDADE 133

[Close]

BLAST of Carg05981 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-52
Identity = 104/158 (65.82%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SKSF C+HGKAYLFNKV NV++G  E R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTG HTVADIFCV CGSIVGW Y                       ETA EKNQKYKEGK
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKY-----------------------ETAHEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWV-SHARSHEVAHGGGSDADEA 158
           SVLERFK+SGP G++YWV SH R     H GGSDAD+A
Sbjct: 121 SVLERFKISGPDGSNYWVSSHGR-----HIGGSDADDA 130

[Close]

BLAST of Carg05981 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-45
Identity = 94/157 (59.87%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQ RHGKAYLF+KVVNV  G KE RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTV DI+CV CGS VGW Y                       E AFEKNQKYKEGK
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKY-----------------------EFAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KV GP G +YWV+     +    G SD D+A
Sbjct: 121 SVLERYKVWGPDGNNYWVA-----QEVEAGDSDTDDA 129

[Close]

BLAST of Carg05981 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-45
Identity = 94/157 (59.87%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQ RHGKAYLF+KVVNV  G KE RMM
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTV DI+CV CGS VGW Y                       E AFEKNQKYKEGK
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKY-----------------------EFAFEKNQKYKEGK 153

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KV GP G +YWV+     +    G SD D+A
Sbjct: 154 SVLERYKVWGPDGNNYWVA-----QEVEAGDSDTDDA 162

[Close]

BLAST of Carg05981 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43
Identity = 85/126 (67.46%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SKSF C+HGKAYLFNKV NV++G  E R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTG HTVADIFCV CGSIVGW Y                       ETA EKNQKYKEGK
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKY-----------------------ETAHEKNQKYKEGK 103

Query: 121 SVLERF 127
           SVLERF
Sbjct: 121 SVLERF 103

[Close]

BLAST of Carg05981 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF C+HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG HTVADIFCV CGS+VGW Y                       E A++K+QKYKEGK
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKY-----------------------EIAYDKSQKYKEGK 113

Query: 121 SVLERFKVSGPGGTSY 137
            +LERFKV GP G  Y
Sbjct: 121 FILERFKVLGPYGGGY 113

The following BLAST results are available for this feature:

BLAST of Carg05981 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033303.1	3.7e-84	100.00	hypothetical protein SDJN02_07358 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923565.1	4.1e-67	85.35	protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cu...	[more]
KAG6602621.1	4.1e-67	85.35	putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_038884693.1	4.3e-64	82.17	protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Ben...	[more]
XP_004138427.1	1.2e-63	81.53	protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucum...	[more]

BLAST of Carg05981 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	1.3e-47	64.10	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	3.0e-44	59.87	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9SR97	3.8e-39	58.09	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	1.0e-36	56.83	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	1.3e-31	53.91	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of Carg05981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRQ1	2.0e-67	85.35	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1	[more]
A0A6J1E6I1	2.0e-67	85.35	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1	[more]
A0A0A0KBL4	6.0e-64	81.53	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1	[more]
A0A1S3B3I1	3.9e-63	80.25	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1	[more]
A0A6J1JR81	2.1e-61	78.85	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1	[more]

BLAST of Carg05981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	2.3e-52	65.82	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	2.1e-45	59.87	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	2.1e-45	59.87	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	2.0e-43	67.46	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	2.7e-40	58.09	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 14..113 e-value: 2.6E-11 score: 43.7
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 106..156 coord: 1..87
None	No IPR available	PANTHER	PTHR13848:SF75	PROTEIN YIPPEE-LIKE	coord: 106..156 coord: 1..87
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..132 score: 45.831062

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05981-RA	Carg05981-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding