Carg05939 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05939
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 21221883 .. 21222548 (-)
RNA-Seq Expression	Carg05939
Synteny	Carg05939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTTAGGAAATTGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAAAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

mRNA sequence

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTTAGGAAATTGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAAAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

Coding sequence (CDS)

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTTAGGAAATTGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAAAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

Protein sequence

MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKGHVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ

Homology

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BLAST of Carg05939 vs. NCBI nr
Match: KAG7033262.1 (hypothetical protein SDJN02_07316, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460.7 bits (1184), Expect = 7.2e-126
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 221

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BLAST of Carg05939 vs. NCBI nr
Match: KAG6602583.1 (hypothetical protein SDJN03_07816, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.8 bits (1179), Expect = 2.7e-125
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASLAIRCGRNFSALDHPYANVPDGCDQKASPR LVAFPGRFRKLRTHISSMKSLQPVKG
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRCLVAFPGRFRKLRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 221

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BLAST of Carg05939 vs. NCBI nr
Match: XP_022963028.1 (uncharacterized protein LOC111463354 [Cucurbita moschata])

HSP 1 Score: 458.4 bits (1178), Expect = 3.6e-125
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRK RTHISSMKSLQPVKG
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 221

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BLAST of Carg05939 vs. NCBI nr
Match: XP_023529332.1 (uncharacterized protein LOC111792215 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 6.7e-124
Identity = 217/221 (98.19%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRK RTHISSM+SLQPVKG
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMRSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           +RWRTLEEQWKNGEARTPEGIIFVQELEEEDY+GESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 NRWRTLEEQWKNGEARTPEGIIFVQELEEEDYDGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 221

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BLAST of Carg05939 vs. NCBI nr
Match: XP_022990776.1 (uncharacterized protein LOC111487559 [Cucurbita maxima])

HSP 1 Score: 437.2 bits (1123), Expect = 8.5e-119
Identity = 212/221 (95.93%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           M SLAI+CGRNFSALDH YANVPDGCDQK SPRSLVAFPGRFRK RTHISSMKSLQPVKG
Sbjct: 1   MVSLAIQCGRNFSALDHGYANVPDGCDQKVSPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAIS DKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISSDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELE+EDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEDEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSR  GGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSR--GGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 219

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BLAST of Carg05939 vs. ExPASy TrEMBL
Match: A0A6J1HGI4 (uncharacterized protein LOC111463354 OS=Cucurbita moschata OX=3662 GN=LOC111463354 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.7e-125
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRK RTHISSMKSLQPVKG
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 221

[Close]

BLAST of Carg05939 vs. ExPASy TrEMBL
Match: A0A6J1JNW7 (uncharacterized protein LOC111487559 OS=Cucurbita maxima OX=3661 GN=LOC111487559 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.1e-119
Identity = 212/221 (95.93%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           M SLAI+CGRNFSALDH YANVPDGCDQK SPRSLVAFPGRFRK RTHISSMKSLQPVKG
Sbjct: 1   MVSLAIQCGRNFSALDHGYANVPDGCDQKVSPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120
           HVKGRKKGNEAIS DKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE
Sbjct: 61  HVKGRKKGNEAISSDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 120

Query: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180
           DRWRTLEEQWKNGEARTPEGIIFVQELE+EDYEGESKAWGIVVQGRCVERGAPVCYLLKT
Sbjct: 121 DRWRTLEEQWKNGEARTPEGIIFVQELEDEDYEGESKAWGIVVQGRCVERGAPVCYLLKT 180

Query: 181 SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           SSSR  GGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ
Sbjct: 181 SSSR--GGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 219

[Close]

BLAST of Carg05939 vs. ExPASy TrEMBL
Match: A0A6J1K0D9 (uncharacterized protein LOC111489497 OS=Cucurbita maxima OX=3661 GN=LOC111489497 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.6e-85
Identity = 163/223 (73.09%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASL IRCG N   LD  Y NV DGCDQKA PRSL    G  RK  + +S+MKSLQ V  
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSTMKSLQSVNR 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTT-EDGKGARLETEKAVE 120
           HVK R   NE ISRDK D+WMKESVV IVKNLREAPLFLR YTT EDG+ AR ETEKAVE
Sbjct: 61  HVKDRTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYE-GESKAWGIVVQGRCVERGAPVCYLL 180
           EDRW  LE+QWK+G A TPEGI+FV+ELE+EDYE GESKAWGIV+QGR VERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGAAPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           KTS +    G+G+WCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Sbjct: 181 KTSRA---AGLGMWCTHFCLVRVKNFRETTKSQLQNCWLVQNQ 220

[Close]

BLAST of Carg05939 vs. ExPASy TrEMBL
Match: A0A6J1FE33 (uncharacterized protein LOC111444891 OS=Cucurbita moschata OX=3662 GN=LOC111444891 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 162/223 (72.65%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKLRTHISSMKSLQPVKG 60
           MASL IRCG N   LD  Y NV DGCDQKA PRSL    G  RK  + +S +KSLQPV  
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60

Query: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTT-EDGKGARLETEKAVE 120
           HVK R   NE ISRDK D+WMKESVV IVKNLREAPLFLR YTT EDG+ AR ETEKAVE
Sbjct: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYE-GESKAWGIVVQGRCVERGAPVCYLL 180
           EDRW  LE+QWK+G   TPEGI+FV+ELE+EDYE GESKAWGIV+QGR VERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           KTS +    G+G+WCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Sbjct: 181 KTSRA---AGLGMWCTHFCLVRVKNFRETTKSQLQNCWLVQNQ 220

[Close]

BLAST of Carg05939 vs. ExPASy TrEMBL
Match: A0A6J1BZC8 (uncharacterized protein LOC111006084 OS=Momordica charantia OX=3673 GN=LOC111006084 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 166/239 (69.46%), Postives = 182/239 (76.15%), Query Frame = 0


Query: 1   MASLAIRCGRNFSALDHPYANVPDG-CDQKASPRSLVAFPG---RFRKLRTHISSMKSLQ 60
           MASL IRCG N   LD PY NV DG CDQKA PRSLV   G   R+R+ R  +S+M SLQ
Sbjct: 1   MASLGIRCGGNCGVLDRPYVNVHDGCCDQKAGPRSLVVPTGSGARWRRSRRFVSAMTSLQ 60

Query: 61  PVKGHVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEK 120
           P    V  R  GNE ISRDKLD+WMKESVV+IVKNLREAPLFLR+YTTEDG+ AR ETEK
Sbjct: 61  P----VNRRGNGNEVISRDKLDEWMKESVVDIVKNLREAPLFLRFYTTEDGEAARFETEK 120

Query: 121 AVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYE--------------GESKAWGIV 180
           AVEE RW  LEEQWKNG A  PEGI+FVQELE++DY+              GESKAWGIV
Sbjct: 121 AVEEKRWPVLEEQWKNGAAPMPEGILFVQELEDDDYDEDADGGGGNGSNIAGESKAWGIV 180

Query: 181 VQGRCVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           +QGR VERG PVCYLLKTSS+    G+GLWCTHFCLVRVKNFRETTKSQL+NCWLLQNQ
Sbjct: 181 IQGRGVERGGPVCYLLKTSSA---AGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ 232

[Close]

BLAST of Carg05939 vs. TAIR 10
Match: AT3G56360.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 88/185 (47.57%), Postives = 117/185 (63.24%), Query Frame = 0


Query: 51  SMKSLQPVKGHVK-----GRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTE 110
           SM+ L P    VK     GRK+G   +SR+KLD W+++SVVEIVKNLRE+PL +  Y   
Sbjct: 51  SMEDLSPPSAAVKIERIGGRKRGGSVVSREKLDVWLRDSVVEIVKNLRESPLLMHLYAEA 110

Query: 111 DGKGARLETEKAVEEDRWRTLEEQWKNGEARTPEGIIFVQEL------EEEDYEG----- 170
           +G      T    E+  W  +E +W  GE RTPEG+I V++L      +++D++G     
Sbjct: 111 NGGLTTTATNPKAED--WTEMEGKWGRGEERTPEGVILVEKLADGDIADDDDHDGGACGE 170

Query: 171 ESKAWGIVVQGRCVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKN 220
           ++ AWGIV QGR  + G PVCYLLKT+  R   G+G  CTHFCLV+VK+FRET  SQL N
Sbjct: 171 DTSAWGIVAQGRGSDTG-PVCYLLKTTRVR--SGMGTVCTHFCLVKVKSFRETAMSQLNN 230

[Close]

BLAST of Carg05939 vs. TAIR 10
Match: AT5G05250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 6.0e-38
Identity = 85/172 (49.42%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 64  GRKKGNE---AISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 123
           GR +G+       R+KLD+WMKESV EIVKNL EAPL +  YT +  +G    T   ++ 
Sbjct: 73  GRSRGDRWEVEAEREKLDRWMKESVTEIVKNLSEAPLLVHLYTGDKEEG----TVVVMKA 132

Query: 124 DRWRTLEEQWKNGEARTPEGIIFVQEL---EEE-----DYEGESKAWGIVVQGRCVERGA 183
           + W  ++ +W+ GEA  PEGI+FV++L   EE      D    ++AWG+VVQGR VE G 
Sbjct: 133 EEWAAVKGRWERGEAEMPEGIVFVEQLGAAEESCGCGFDGGDGTRAWGLVVQGRGVECG- 192

Query: 184 PVCYLLKT----SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQN 221
           PVCYLLKT    S S  G G+G+ CTHFCL +V +FRET++SQL+NCWL+ N
Sbjct: 193 PVCYLLKTTRVGSGSGSGSGLGMRCTHFCLAKVSSFRETSESQLRNCWLVGN 239

The following BLAST results are available for this feature:

BLAST of Carg05939 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033262.1	7.2e-126	100.00	hypothetical protein SDJN02_07316, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6602583.1	2.7e-125	99.55	hypothetical protein SDJN03_07816, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963028.1	3.6e-125	99.55	uncharacterized protein LOC111463354 [Cucurbita moschata]	[more]
XP_023529332.1	6.7e-124	98.19	uncharacterized protein LOC111792215 [Cucurbita pepo subsp. pepo]	[more]
XP_022990776.1	8.5e-119	95.93	uncharacterized protein LOC111487559 [Cucurbita maxima]	[more]

BLAST of Carg05939 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGI4	1.7e-125	99.55	uncharacterized protein LOC111463354 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1JNW7	4.1e-119	95.93	uncharacterized protein LOC111487559 OS=Cucurbita maxima OX=3661 GN=LOC111487559...	[more]
A0A6J1K0D9	6.6e-85	73.09	uncharacterized protein LOC111489497 OS=Cucurbita maxima OX=3661 GN=LOC111489497...	[more]
A0A6J1FE33	1.1e-84	72.65	uncharacterized protein LOC111444891 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]
A0A6J1BZC8	1.1e-82	69.46	uncharacterized protein LOC111006084 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of Carg05939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56360.1	1.4e-39	47.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G05250.1	6.0e-38	49.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35127	FAMILY NOT NAMED	coord: 39..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05939-RA	Carg05939-RA	mRNA