Carg05887 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05887
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SPIRAL1-like 3
Location	Carg_Chr04: 20933185 .. 20936115 (+)
RNA-Seq Expression	Carg05887
Synteny	Carg05887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCAAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTCGATCCCATTTTCATTCACATAACATTTTGGAGGTACTCGCTTTAAATCTTCACCTTCTCATTTCAGATCCACATTTCTTTAAGGTTTTGTTCGCCGATCTGATCATTTGTTGCTATTTTCCCGCACTCCATTTCCGTCTTTGTACGTACATTCATGATATACTTGATTCACTGTCTACATTGTTTTCGTTTACCAATTTGATTTATGTTCTTTGATCTTTGATGAGGTTGAATTGAAATCTGATCCTTGTTTTGGTGTTGAATCGATTGAAATGTTGAAATGTTGAAATGTTTGTTGCTGGATGCTGTGTGAGCTCAAAATTATAGCACACTTGTTTGTAGTGGATCTGTAAGAAGAAACTGGGAATATTTGAAGCATGATATGAATCATGCATAGAAATGAAGAATTCATACCATGTGGTTCGCAGTTTGCCAAGTGTTATAGTAAATGATGTAGGTATTAGTTCATTGTCAGCTGATTAACAAAGTTGCCAATTCACCCACAAAGAGAACTGCAAAACTAAAAATATCCATATTGTTTTGTGAGTTGGAATATTATCACGGACCTTCATTTCAAAACTACCAAAATCTTTTAAAATATTGGACGAAAATCGATGTAATAATGACTAAGACGCTTGCCTAAATTAAGTCTACATTAAGAAACATTGACTTTTCGTCCAATATTCTAATAGTTTTTCTATTCGAATGGTAGATTTTAAACATGGTGAAAGGTAACATTGCAACTTTTAAAAGAATAGACATTTTTTAAAATTTAGCCATTTTTAAATTAAGAACTTGCTGCTCACGAAGATGTGCAATAGATTTTTTTCATCTAGTTTTGTTCATCAGTGGTTGTAGCTTTGTACCTTCCTCTTTTATTCATTGAAATACTATTAATAATGTAGAGCCGGCTTGGTAGACGTCAACAAGGGCCAAATGGTCATCGTAGCTCTTTACCCTGATATTTTATTAACTAAATTTCAGAATTGGGTTGATAGTCTTCAACAAGAGCCTTTGGATCACGATTTTGTGCTTAAACAAGCATGCATTTTATATATACTGTTGCTGTATATGCCAAATGTATGATATTGGCAATTTATGCCTATAACTTTATTTCCCTCTGACTTCTCTGGATGTTATTTCCTTTACGGTATGCCCCCTTTTTCTCTTTATATAGTCTAATAGTTAAATGTGTTATCACTATAATTACATCGGGGTCTTATGTTGTTGTGTTAACAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGTGGAGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAAGCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGTAGGCTCTTTGTTTTCTTGTTGGATTGAAATGTTTTGTGCTGATAGTTATTCACCAACTATCCGGACCTTCCACTGACATATTTATAAGACCGTAACTGTAATAGTCAAAGCCCACCGTCGGTAGATATTGTCCTGTTTGAACTTTTCCTTTCAGCCCCTCGAGGTTTTTAAAACACTTTCGAGACGTTTCTACACCCTTATAAAGAATGGTTTGTTCACCTCTTCGATGCTTGGACAAGTCTTTATCCCTTTGACCTTACTAATTGGTTAACTGTGTTTAAAAAATGTTTAAGTTGGTACAATCTTTGATAATCATGGCGAGTGATGGGCCGAAAGTGAAGGCAGAGAGGAGATAGCTTAGGCCATTGTTCTAGAGAAAAAGGCTCATACAGTAGGCAGATAGGAAATTCCTGAAACATTAGGAAGATTGATGTCTCAATAAACCAAAGGGTGAAGAAAGCAGTATACCAGTTACATCTACAGGAGCTTCTCACCCACCATTTTCTTAGAACTTCTTTCTTGGGGAATAACCAAAGAAAAGATTCTAGTAACAATAGATGTGCCCAAGAACATTTGTTAATTATTAACGTTACGCCCAAGCCCACCGCTAGTAGATATTGTCCTATTTAGGCTTTCCTTTTCAGACTTTCTCTCAAGATTTTAAAATGCGTTTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTCCGTCCTACTCCCCAACCGATGTGGGATCTCACAATTAATTAAGTAGGGATGAGATCCTCAATACTACAGAAACACATCACTAATTATAGTGGATGACACTTTCAACTGTTTCAATTTTTGATCTGAGAAAGATTCAGTTTTTAATCTGAAAGTTCTGAAGAATGCTTCGTCAAAGTGTTCTGAATCTGAATCAATGGATGATTATGGCTTTATATCAAATCTGAATCCTCATTTATATATATAACCATTGGAATGTAAACGTTGGTGCATGTATTGACAGGATCGTCCATCGACCAAGGTTCACGCTGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCCCCTCATGGTCAGAACTGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAAATTGACAGTCCACCCTTTCTG

mRNA sequence

AATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCAAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTCGATCCCATTTTCATTCACATAACATTTTGGAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGTGGAGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAAGCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCTGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCCCCTCATGGTCAGAACTGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAAATTGACAGTCCACCCTTTCTG

Coding sequence (CDS)

ATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGTGGAGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAAGCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCTGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAA

Protein sequence

MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS

Homology

[Close]

BLAST of Carg05887 vs. NCBI nr
Match: KAG7033210.1 (Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.1 bits (518), Expect = 5.6e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Carg05887 vs. NCBI nr
Match: XP_022954496.1 (protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954513.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022990950.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990951.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990952.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_023538178.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538185.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538193.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Carg05887 vs. NCBI nr
Match: KAG6602534.1 (putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 390 MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 449

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 450 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 491

[Close]

BLAST of Carg05887 vs. NCBI nr
Match: XP_022134514.1 (protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-like 3 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIP 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+K NGSSQPTSST+Q  DK+I    PAGIP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 61  GNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
            N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Carg05887 vs. NCBI nr
Match: XP_038889735.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 7.1e-36
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           M RGVSSGGGQSSLGYLFG GEPAN+VQ S+K+ GSSQ  +STS   DK  PAGIPG+ T
Sbjct: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 102

[Close]

BLAST of Carg05887 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 9.0e-26
Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGE     ++++K     +P  S+S    K IPAGI  +  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP---KSAEKPAPVQKPAPSSSAEKLKEIPAGIQSSKA 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
           NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   K
Sbjct: 61  NNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNK 98

[Close]

BLAST of Carg05887 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-25
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Carg05887 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 70/112 (62.50%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKH 60
           MGRGVS GGGQSSLGYLFG GE   PA NN  A         A+ S +  ++ +    K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Carg05887 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.8e-24
Identity = 65/110 (59.09%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 2   GRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPT-------------SSTSQPAD 61
           GRGVSSGGGQSSLGYLFGGGE A   +A   A    + T             S ++    
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAAEKM 63

Query: 62  KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K IPAGI     NNY RA GQNCGNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 64  KEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFG 113

[Close]

BLAST of Carg05887 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21
Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSS-------QPTSSTSQPAD----- 60
           M RG S+GGGQSSLGYLFGG E      A+K A  ++        P ++ + PA+     
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPK--PAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPA 60

Query: 61  -----KHIPAGIPGNHT-NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
                K IPAGI G+ + NNYHRADGQN GNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61  KADATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of Carg05887 vs. ExPASy TrEMBL
Match: A0A6J1JRI1 (protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Carg05887 vs. ExPASy TrEMBL
Match: A0A6J1GRA9 (protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Carg05887 vs. ExPASy TrEMBL
Match: A0A6J1BYY1 (protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.0e-41
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHI----PAGIP 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+K NGSSQPTSST+Q  DK+I    PAGIP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 61  GNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
            N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Carg05887 vs. ExPASy TrEMBL
Match: A0A5C7HMB5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015768 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30
Identity = 77/105 (73.33%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKA-----NGSSQPTSSTSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GE ANNVQA +       N   Q  S  SQP DK IPAG+
Sbjct: 80  MGRGVSAGGGQSSLGYLFGNGETANNVQAPQNKGQTADNAPFQKPSVASQPRDKQIPAGV 139

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
            GN TNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 140 HGNLTNNYIRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 184

[Close]

BLAST of Carg05887 vs. ExPASy TrEMBL
Match: A0A067JWW4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.2e-30
Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60
          MGRGVS+GGGQSSLGYLFG GE ANN +A+K  + SSQ     SQP DK IPAGI GN T
Sbjct: 1  MGRGVSAGGGQSSLGYLFGNGESANNDKAAK--SPSSQKPIVGSQPIDKQIPAGIHGNLT 60

Query: 61 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
          NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61 NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 96

[Close]

BLAST of Carg05887 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Carg05887 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKANGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  +++  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Carg05887 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 70/112 (62.50%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQASK------KANGSSQPTSSTSQPADKH 60
           MGRGVS GGGQSSLGYLFG GE   PA NN  A         A+ S +  ++ +    K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Carg05887 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 100.5 bits (249), Expect = 8.1e-22
Identity = 70/120 (58.33%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS 60
           MGRG S GGGQSSL YLFGG  PA   V A + A     NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 61  -QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
            +PA+  K IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  GK
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

[Close]

BLAST of Carg05887 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 100.5 bits (249), Expect = 8.1e-22
Identity = 70/120 (58.33%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPA-NNVQASKKA-----NGSSQP----------TSSTS 60
           MGRG S GGGQSSL YLFGG  PA   V A + A     NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 61  -QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
            +PA+  K IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  GK
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

The following BLAST results are available for this feature:

BLAST of Carg05887 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033210.1	5.6e-49	100.00	Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954496.1	2.1e-48	99.02	protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like...	[more]
KAG6602534.1	2.1e-48	99.02	putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_022134514.1	1.2e-40	86.79	protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-lik...	[more]
XP_038889735.1	7.1e-36	81.37	protein SPIRAL1-like 1 [Benincasa hispida]	[more]

BLAST of Carg05887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QQ99	9.0e-26	64.36	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q9LE54	5.8e-25	58.18	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
B3H4F1	1.7e-24	62.50	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q2R0W8	3.8e-24	59.09	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]
Q7Y1L9	1.0e-21	56.03	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]

BLAST of Carg05887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRI1	1.0e-48	99.02	protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1	[more]
A0A6J1GRA9	1.0e-48	99.02	protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1	[more]
A0A6J1BYY1	6.0e-41	86.79	protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1	[more]
A0A5C7HMB5	3.7e-30	73.33	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015768 PE=3 SV=1	[more]
A0A067JWW4	8.2e-30	77.55	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1	[more]

BLAST of Carg05887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69230.1	4.2e-26	58.18	SPIRAL1-like2	[more]
AT1G69230.2	4.2e-26	58.18	SPIRAL1-like2	[more]
AT1G26355.1	1.2e-25	62.50	SPIRAL1-like1	[more]
AT2G03680.1	8.1e-22	58.33	spiral1	[more]
AT2G03680.2	8.1e-22	58.33	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 1..100
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05887-RA	Carg05887-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis