Carg05803 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05803
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DUF740 domain-containing protein
Location	Carg_Chr16: 4584322 .. 4585374 (-)
RNA-Seq Expression	Carg05803
Synteny	Carg05803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGCGGAGGAAAGAAGAAAGTTGGGTTTTGGTCCGCCCCAAAGCTCTGTATTTTCATTCCCACCCCAAAGTTTCTTCTAGGGAAATTTTGGGTTGATAGATTCTGTATCATTTTTTTTTTAATTTTAAATATTTTTATTTAGTAAATTAATTAGTATTTTTCTTTCGATTTGTTAGACGAACACGACTCTCCATGATGGTATAATATTGTCCACTCTAACTATAAACTGTTATGTTTTGTTTTGAGAAAGTTTTGGGCTTTCTCAATATTCTTTGTTTATAAACCATAATGATTCTGAGTTGTGGGACTTTCATCATCCAACTCGCGTTTACAGATTTTTGCTATTATTATTATTATATTTTATTTTCTACGAATCTAAAAAAAAATTAATGAAATTCACAATCAATTGGGGATTTTTTTAGTTGAACAACCAAATTGAAGGAGTCAACATTTATTAATGCTAATTTACCTAATTTTGCAACTTGTTTTTTTGGTCTCTCAGGAATCAAGACCATAAAATTAATAACAATATTAATTAATTAAATCGACTCGATGATAATACGACACTTTTTAGAACTAAAAAGAAAAAAAAGATACTACTAGAAATAAGACTGGAGAATTCTATTACCCTAATTTTTTTGGAACGTTTATTACTGTTTCTATCGTACTTAAATTTTTGAATTCTACCCTTCTTTCAAATCATGTTCATGTGCAGGTCTCGAACCAGTGA

mRNA sequence

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGCGGAGGAAAGAAGAAAGTCTCGAACCAGTGA

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGCGGAGGAAAGAAGAAAGTCTCGAACCAGTGA

Protein sequence

MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFFSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKVSNQ

Homology

[Close]

BLAST of Carg05803 vs. NCBI nr
Match: KAG7015370.1 (hypothetical protein SDJN02_23005, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKVSNQ 119
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKVSNQ
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKVSNQ 118

[Close]

BLAST of Carg05803 vs. NCBI nr
Match: KAG6577287.1 (hypothetical protein SDJN03_24861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 110
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 109

[Close]

BLAST of Carg05803 vs. NCBI nr
Match: XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQ-SSISHSNSRSTSSSSFLKSSESF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQ SSI++S+SRSTSSSSFLKSSESF
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115

Query: 61  FSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           FSGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV
Sbjct: 116 FSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 171

[Close]

BLAST of Carg05803 vs. NCBI nr
Match: XP_023553119.1 (uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-48
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESA+ECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+S+SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESARECKRHQNHNQLPGICPSCLRERLQQLQQSSISYSDSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKK 114
           SGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGGG KK
Sbjct: 61  SGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGKKK 113

[Close]

BLAST of Carg05803 vs. NCBI nr
Match: XP_022929275.1 (uncharacterized protein LOC111435907 [Cucurbita moschata])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+++SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISAD     GGGGKKKV
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISAD-----GGGGKKKV 110

[Close]

BLAST of Carg05803 vs. ExPASy TrEMBL
Match: A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.3e-49
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQ-SSISHSNSRSTSSSSFLKSSESF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQ SSI++S+SRSTSSSSFLKSSESF
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115

Query: 61  FSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           FSGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV
Sbjct: 116 FSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 171

[Close]

BLAST of Carg05803 vs. ExPASy TrEMBL
Match: A0A6J1ETY8 (uncharacterized protein LOC111435907 OS=Cucurbita moschata OX=3662 GN=LOC111435907 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.5e-47
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+++SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISAD     GGGGKKKV
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISAD-----GGGGKKKV 110

[Close]

BLAST of Carg05803 vs. ExPASy TrEMBL
Match: A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.9e-26
Identity = 77/117 (65.81%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH NHN LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTS--WRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           S ++S   RR H RNASE  TGSMA DL  DK+KK+ SIRIS DGG G G  GKKK+
Sbjct: 61  SADSSRRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKL 116

[Close]

BLAST of Carg05803 vs. ExPASy TrEMBL
Match: A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.4e-26
Identity = 78/118 (66.10%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTSWRRR---HTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           S ++S R R   H RNASE  TGSMA DL  DK+KKS SIRISADGG G G  GKKK+
Sbjct: 61  SADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKKL 117

[Close]

BLAST of Carg05803 vs. ExPASy TrEMBL
Match: A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.2e-25
Identity = 77/118 (65.25%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTSWRRR---HTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 116
           S ++S R R   H RNASE  TGSMA DL  DK+KKS SIRISADG  G G  GKKK+
Sbjct: 61  SADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKL 117

The following BLAST results are available for this feature:

BLAST of Carg05803 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015370.1	3.9e-54	100.00	hypothetical protein SDJN02_23005, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6577287.1	2.2e-49	100.00	hypothetical protein SDJN03_24861, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985135.1	1.1e-48	95.69	uncharacterized protein LOC111483218, partial [Cucurbita maxima]	[more]
XP_023553119.1	5.5e-48	95.58	uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo]	[more]
XP_022929275.1	1.3e-46	93.04	uncharacterized protein LOC111435907 [Cucurbita moschata]	[more]

BLAST of Carg05803 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAI6	5.3e-49	95.69	uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218...	[more]
A0A6J1ETY8	6.5e-47	93.04	uncharacterized protein LOC111435907 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A0A0KZB2	4.9e-26	65.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1	[more]
A0A5A7TS78	6.4e-26	66.10	DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CZT1	3.2e-25	65.25	DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Carg05803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008004	Protein OCTOPUS-like	PFAM	PF05340	DUF740	coord: 6..70 e-value: 5.0E-9 score: 35.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR34046	OS06G0218800 PROTEIN	coord: 1..114
None	No IPR available	PANTHER	PTHR34046:SF18	RAPIDLY ELICITED PROTEIN, PUTATIVE-RELATED	coord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05803-RA	Carg05803-RA	mRNA