Carg05649 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05649
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor ILR3-like
Location	Carg_Chr16: 3571548 .. 3574625 (-)
RNA-Seq Expression	Carg05649
Synteny	Carg05649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATAATACGCCCCCAATCCCCAATCTTCAACGAATTTTATCGTCCCCAAATTTTTCATCTCCTTCAATTGCCCTAACCCTAATTCTGGTCCTCTGATTTTGCTTTCAATTATCATTCTGATCGGATTAGTAACGCTTTTTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTTGAGAAAATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTATGGTTTGATCGATGACATCCCCGTCTCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGGTAATCTTCAGATCTCTTTCGATTAAGCTCTTAAGCTTGTTTTTGTTTTTTTCGTATCGAAAGCTAAATTAGGTTTTGTTTGCTTCGAATGGTGGTTTGTTTTTTGTGTTTCTTCCCGGGTTTTCGTGTACTTGCCGAATTATGGGAGGTGGAGTGGCCCTTTAATTGCCGTCCAGATTAATATTGGAGAAGATCTCAACCTGCTTTGGAGCTTTTTTGGATTGAGCTAGTAATGAGTTCGGACGTCCGAGTTTTTTGACTGGAAAACTCTGAGGTTTTGAGGAAAATGGTTTATAGATACTACTGGTTCTGTTTGGTGAACTATTAGGTTGTTGACCGGATTGATTTAGTGTCCACAGGGGTGATGGGTGGGATTAACAAGACGTTGGGGGCGTGAATATGCCAAGAACTATGTGTTGTTGTATTTTGGTAACAGTAAGATTGTAAGGTTGATTGTGCGTCTTGGCTTTTAGGTCTATATGAATTTGTATAAATGGTAGTTTCTCTGTGAGGAAAGTTTCGTATGTTATGTTGAATTCCGGTAGCATGTAGAAAGATTTGTCTTTTACTTTTTTCGACATATTAATGTAAATTTTGTTGATGGTTAGTTCTTTTTCTTTGGACATGTTATTCTAGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAAAAGAGGTACGAGACCTTCGTTATTACTTTTTAATCTTGTCTGTTCAATATAAACAACCTTTTGACTCTTGGTAATATTTCTGCTTTGAAGTCTTTTCCATAACGATGATCTGGGAATCAATATCATTAGAAATATATTAGCTGTATTATTATTGGCACAAACAGCATGAATCGACTTTATGCAAGCATTTTAGTTAGTCATTACCTGTACAGTGAGGTCTTTTCTAATTTAAAATTTCCAGAAATTTGTATCCAGTTTATGTTCTAATCGACTTGAAACTAGGTTTACATTTTATCTTACTGCTGAAATTTAAGTCTATGTGATCTTTTACTCCGGTCACAGCACTTTCGATGGTTACTCACTTGTCAGATATGTGTTAACTGAAGAGCATTCAGTTGTATGGCATGGATGGGAGGGAGTGATAAAGCTATGATTCTTCCTTTATTTTAACTTCAATGCAATTATATGTGAGAGTTCTAATAGGATTGTATGGAGATGATATGTAGGATATTAGTAATGGCATAGTAGTAATTAGATAGGGTGACTTAGTTATAAATAGAGGGAGATAGGGACTTTAGAGGGGAGATCATTTTAGTGGAATTGACCATTGTGGGACTCGAGAGCGAGTTTCCCACTCGAAAGGCTATAGTTATACTGTAATTTCCCTTTGATATCGCAATTTATTAGTATCTTGTGGTAAGTGTTTGGCACCTAATAAATTGTTTGTGGCTTTTTATTATAACTATATTACATCAAGCTGATTATTCGTATTGATATCGTATCTAGTGTCCTAATCAATGTGATTTAGTAAAAGGCTAAGGATCCATTTATTTATTTTACGTCCTTTTTCCGTTGTGAAATTTGGCTTACCATGTTAAGATGTTGAGTTGGTTTAACTAGGTGTAAATAGATATAGTAACAAATGAAACTAAAAGTGGGAAGGAAAATATGATACAGCATCAAATAAAGTATACTCGTTTTATGCTGCAGGGTCCGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTACTTCCTCGATCCCGAACCCCCCATTTATCTATGTTTATAACGATTGTCTGTTACCTCAACAAATCAAATTGTTATGTGCATCTCAAAACAGGTTTCTGACACTGGGCTCCATTTTGGAACCTGGAAGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAACTGAAGGTACGTCTATTTCGCTTTCTTGCCAAAGACGTGCCATTATATTAGCTCGCTTTGATTGCTTTTGATGCATTTGAATGGAGAAGTCTGATAATGATATTTCATTTCTCGCAATCTTGTATAGGCCGAGAAGAATGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAACTCGGTGACCAGCTGAGGTTTCCTGTAAAATTCCACTGGCAGCATCTGGTTGCTTGGGAATTTATCCTTAACTTCAATATTTATTCTGTCATTGTGGAGCAATATATATTAGTATTGGTAGTTTGTAGGGTTGTCAATTGTTTTTGGGACTGACTATCATATGTGTCATTGGATACTTGAAAGAAGAACAAGTACTATCTTGTAATTGTAAATGTGATTTGAGTGATTTGCTAAATGACTCTCTCCATTCCATGCCCTTTCCGCGTTCTCTGGTGGTGAATAGTGAAGTTGGGGAAGCCATTGCCACTCATCTTTAGCCCTTCAATTATACGTTGCACACTACGTATAAT

mRNA sequence

AACAATAATACGCCCCCAATCCCCAATCTTCAACGAATTTTATCGTCCCCAAATTTTTCATCTCCTTCAATTGCCCTAACCCTAATTCTGGTCCTCTGATTTTGCTTTCAATTATCATTCTGATCGGATTAGTAACGCTTTTTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTTGAGAAAATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTATGGTTTGATCGATGACATCCCCGTCTCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGGTAATCTTCAGATCTCTTTCGATTAAGCTCTTAAGCTTGTTTTTGTTTTTTTCGTATCGAAAGCTAAATTAGGTTTTGTTTGCTTCGAATGGTGGTTTGTTTTTTGTGTTTCTTCCCGGGTTTTCGTGTACTTGCCGAATTATGGGAGGTGGAGTGGCCCTTTAATTGCCGTCCAGATTAATATTGGAGAAGATCTCAACCTGCTTTGGAGCTTTTTTGGATTGAGCTAGTAATGAGTTCGGACGTCCGAGTTTTTTGACTGGAAAACTCTGAGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAAAAGAGGGTCCGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTTTCTGACACTGGGCTCCATTTTGGAACCTGGAAGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAACTGAAGGCCGAGAAGAATGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAACTCGGTGACCAGCTGAGGTTTCCTGTAAAATTCCACTGGCAGCATCTGGTTGCTTGGGAATTTATCCTTAACTTCAATATTTATTCTGTCATTGTGGAGCAATATATATTAGTATTGGTAGTTTGTAGGGTTGTCAATTGTTTTTGGGACTGACTATCATATGTGTCATTGGATACTTGAAAGAAGAACAAGTACTATCTTGTAATTGTAAATGTGATTTGAGTGATTTGCTAAATGACTCTCTCCATTCCATGCCCTTTCCGCGTTCTCTGGTGGTGAATAGTGAAGTTGGGGAAGCCATTGCCACTCATCTTTAGCCCTTCAATTATACGTTGCACACTACGTATAAT

Coding sequence (CDS)

ATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAACTGAAGGCCGAGAAGAATGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAA

Protein sequence

MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

Homology

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BLAST of Carg05649 vs. NCBI nr
Match: XP_022981592.1 (transcription factor ILR3-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG
Sbjct: 122 MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 182 FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg05649 vs. NCBI nr
Match: KAG7015219.1 (Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG
Sbjct: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 115

[Close]

BLAST of Carg05649 vs. NCBI nr
Match: XP_022940189.1 (transcription factor ILR3-like [Cucurbita moschata] >XP_023525507.1 transcription factor ILR3-like [Cucurbita pepo subsp. pepo] >KAG6607821.1 Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG
Sbjct: 122 MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 182 FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

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BLAST of Carg05649 vs. NCBI nr
Match: XP_038900262.1 (transcription factor ILR3-like [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   G
Sbjct: 122 MVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQ QAP G+KLVPFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 182 FLPPPIPTFAAQCQAP-GSKLVPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

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BLAST of Carg05649 vs. NCBI nr
Match: XP_008454561.1 (PREDICTED: transcription factor ILR3-like [Cucumis melo] >KAA0046455.1 transcription factor ILR3-like [Cucumis melo var. makuwa] >TYJ97758.1 transcription factor ILR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 6.5e-46
Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   G
Sbjct: 122 MVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 182 FLPPPIPTFPAQGQAP-GNKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

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BLAST of Carg05649 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-36
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A    
Sbjct: 118 MVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPS 177

Query: 61  FLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 178 FFPAPPMMPTAFASAQGQAP-GNKMVPIISY-PGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg05649 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.7e-31
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P  
Sbjct: 113 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQP 172

Query: 61  ---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
              FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 173 QPCFLPN--PQTLSQAQAP-GSKLVPFTTY-PGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Carg05649 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-19
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +G
Sbjct: 177 ILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSG 236

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F+P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 237 FIPHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 283

[Close]

BLAST of Carg05649 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-17
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           +VNQLR EA +L+E+N  L ++IK LKA+KNELR+EK  LKA+KEK+EQQ+KSM     G
Sbjct: 209 VVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPG 268

Query: 61  FLPPPIP-TFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F+P   P  F +   A       P+  Y P++ MW  +PPA  DTS+D    PPVA
Sbjct: 269 FMPSQHPAAFHSHKMAVA----YPYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of Carg05649 vs. ExPASy TrEMBL
Match: A0A6J1IUE4 (transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111480664 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.3e-55
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG
Sbjct: 122 MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 182 FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg05649 vs. ExPASy TrEMBL
Match: A0A6J1FJB6 (transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111445891 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.3e-55
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG
Sbjct: 122 MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 182 FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg05649 vs. ExPASy TrEMBL
Match: A0A0A0L7N8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46
Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   G
Sbjct: 122 MVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 182 FLPPPIPTFPAQGQAP-GNKLFPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of Carg05649 vs. ExPASy TrEMBL
Match: A0A5D3BHU4 (Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00660 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46
Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   G
Sbjct: 122 MVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 182 FLPPPIPTFPAQGQAP-GNKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Carg05649 vs. ExPASy TrEMBL
Match: A0A1S3BYW4 (transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103494952 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46
Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   G
Sbjct: 122 MVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPG 181

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           FLPPPIPTF AQ QAP GNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 182 FLPPPIPTFPAQGQAP-GNKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Carg05649 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A    
Sbjct: 118 MVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPS 177

Query: 61  FLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 178 FFPAPPMMPTAFASAQGQAP-GNKMVPIISY-PGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg05649 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.3e-32
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P  
Sbjct: 113 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQP 172

Query: 61  ---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
              FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 173 QPCFLPN--PQTLSQAQAP-GSKLVPFTTY-PGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Carg05649 vs. TAIR 10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.3e-32
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           MVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P  
Sbjct: 179 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQP 238

Query: 61  ---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
              FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 239 QPCFLPN--PQTLSQAQAP-GSKLVPFTTY-PGFAMWQFMPPAAVDTSQDHVLRPPVA 292

[Close]

BLAST of Carg05649 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-20
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +G
Sbjct: 177 ILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSG 236

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F+P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 237 FIPHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 283

[Close]

BLAST of Carg05649 vs. TAIR 10
Match: AT4G14410.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-20
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 1   MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 60
           ++NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +G
Sbjct: 171 ILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSG 230

Query: 61  FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 116
           F+P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 231 FIPHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 277

The following BLAST results are available for this feature:

BLAST of Carg05649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981592.1	1.3e-54	100.00	transcription factor ILR3-like [Cucurbita maxima]	[more]
KAG7015219.1	1.3e-54	100.00	Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940189.1	1.3e-54	100.00	transcription factor ILR3-like [Cucurbita moschata] >XP_023525507.1 transcriptio...	[more]
XP_038900262.1	2.2e-46	90.43	transcription factor ILR3-like [Benincasa hispida]	[more]
XP_008454561.1	6.5e-46	89.57	PREDICTED: transcription factor ILR3-like [Cucumis melo] >KAA0046455.1 transcrip...	[more]

BLAST of Carg05649 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH37	2.2e-36	74.79	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
Q9C682	4.7e-31	67.80	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q8L467	9.2e-19	52.17	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
Q9LTC7	8.6e-17	49.14	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]

BLAST of Carg05649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUE4	6.3e-55	100.00	transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111480664 PE=4 ...	[more]
A0A6J1FJB6	6.3e-55	100.00	transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111445891 PE=...	[more]
A0A0A0L7N8	2.4e-46	90.43	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 S...	[more]
A0A5D3BHU4	3.2e-46	89.57	Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BYW4	3.2e-46	89.57	transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103494952 PE=4 SV=1	[more]

BLAST of Carg05649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54680.1	1.6e-37	74.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.1	3.3e-32	67.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	3.3e-32	67.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	6.6e-20	52.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.2	6.6e-20	52.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..57
None	No IPR available	GENE3D	1.20.5.340		coord: 1..57 e-value: 3.4E-8 score: 35.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..66
None	No IPR available	PANTHER	PTHR46133:SF10	BHLH DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..115
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05649-RA	Carg05649-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity