Carg05646 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05646
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Trafficking protein particle complex subunit
Location	Carg_Chr16: 3545021 .. 3551757 (+)
RNA-Seq Expression	Carg05646
Synteny	Carg05646

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCTGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGGTAAGCTTCACGAATTCAAGTCTCTATGTTGTTTTCTTTGATGTTTTGTTTGTGAGGGATTTTAAGAACATGGGAGGGAGGGAGGGAGGGAGGGAAGAGGTGAGAAATTTGATCAGATGTATTTAAAATGGTAAATTTGTCTTTGATTTGGATGTGTGTTTTTAGTTCTTGATTTCATTTCTGTTTTTTGGGTTATCTTCTATTGATGAGAAGCTAAAGTTGAAATTGATGTAGAATGCCGAGCTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAGTTGCTCACGGATCTGGAGGAGGTCGAAGAAGTTAACAAACAGCTCGATCAGATGTAATCTTACTCCACTTCACTTGCTCTTTGATCCATTTTCCTTTTCAGAACATAGAATTCTGCATTTTTTTTTTTCCAGAGAACTACTTTTTTTTTTTTTTTTGGTGAATGATTGATGGGTCTGAATTACCAGTTTAGTTTTTGTCTTTGTTTTATGATTTATTTGGTTTTTCATTGGCTCTCATCTTTGTATAACCTCATGTGGAGCCGAAGGCCATTAAAGAATGTGTACGGAAATGCATACCTCTGTGGTATACAAAGCGTTCTAACGTAAACTAAAATGACTTGCATTTTGCAAATTTCCTTACATTCGTTCCATAAGAGTCTTGCAGAAGCTTAATGCTTTTTACTATTATGAACTGTGCTCGAATTTTAGTTTGAGAGTTTAAATGTGCATGAGAACCACTGTGGATTGACCTAATCTATTGGGGCATGTGAAAAACACAAAGGGATTTTGGGAGAACGAGTTCAAACTCTTTAGTGACCACCTACCTAAGATAAAATAATACATACTTTTTTCGTAATTGAATGTTATTTTTTTCATAATTGAATGTTGTAGTGTCAGACAATTATCCTATGAAAATGAATTAGTATGCATGGGAATGATACTCCTATTTGGTTGGGTGTTTTTATTTATTAATTTTAATGTTTTTTCTTGTATTCTGGGCTTTTATCTTCTGTAAGAAAGTCGGTTTATTTATTTATTTATTAAAAGGAAATAGTGTGCATGATGAGTACATACTAAGCATAATTTTTTTTTTCAATACTTTCTACTTTCATTGATAAAAAAATGAAAATCTCTTTTGTGCGCAAACTTAATCTCCTTGTGCCAACACACATTACATTCAGTGGTACGATTGTTTCTTCAATTACTTTTCAGGGGCTATAATATTGGAATCCGGTTGATTGACGAGTTTCTTGCAAAATCCAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTAGGTTGCTGTTGAATACGTATTCGTATTAGTATCAAAACCTTACTCGGTTTAGGAAACTTTGACCAAACTTAGGTTGGTTCTATCTACGTCTTTTTGTTGTATTATTACTTACTATATTAATTCCTTTTATTTGTTTTTACGGTGGATAGTTTGTTGTTACCATTAAGTTGTTTGTCCAGTCCTGCTGTGTATAAATTTATAGTTGTTATCGGGACAAAATCTGCTTATAATAATAATAATAAAAACTATAATTTGGTCTATGCCAAATTGATATAAGATTTCCAAGATTTTGGTTTGATGGTTGGAAAGAAGCTGGTCAATCCAACGGGGGGAGATACTTCTTGAGTGGGCAAAGTGGTGTAGGTAATAACCGTCCTCTCATAAACATCAACGACGAAGGAATCATTGCTAGAAAATTGGATCAATCCTTGGTTAACCAAAATCACCTGCAACTTCAAAAAAACAGAGGACACAACAACTTGGGCCAACAAAGAAAAAACACACCACCACCAAATCAGTAGCCTCCAATAAACAATCAAGAATTACAATTCATTCGTCAGGAACCACCAAGAATGTAAGTTACGGAATAAGACACTGCCAAGATCTTGATAATTTAAGTGATGAAGAAGAGGACAGTGACAGTGATGATGATAGAAAGACAAACAACCGGAAAACTGGAGAAATGAACGATTACAAAATAAAAGTTGATCTCCTGAGTTTTAATAGAAAGTTGGATATTGAAATCTTCCTTGATTGGATTAAAAGGGTGGAGAGCTTCTTCAACTTCATGAATACACCAACAAAATGATAGTGATTTTCATGCATTTGGACCAACTGTTCAAATAATGTTAACTCTTATGATTACCGTCTTCTTGATGGTTTTTTACCCAAAGGGGATCAATTGTACTTGCCCCATACGTCCATTTGATAATCAGCAATCAAAGATTTACATTCAAGAGAATTGGGAGATCATTTTGGAAGGGATAAAACCATGGAATTCACAAGAGAATTGGGAGATCATTTTGGAAGGGATATAACCATGGAATTCGTTTCATCCAATTATTTTCGGCCACAGCTTCTAAAAGATGTTCAGAATTTTATTAGAAGTTGCCTTATTTGTCAAACAGAAGAGGTAACTTCTAGCAATGATGAACTTTACACTCCTCTGCCAATACCAGCATCTACATGGGAGGATTTGTCAATGGACTTTGTCCAAGGATTTCCTCGAACTCAAATACGGTTTGATTCAGTTTTTGTAGTGGTGGACAGGCTTAGTAAAGTGACACACTTCCTTGTAAAAAGACTAATGATATCTTGTATATGCTAGCCTTTTCTAGTGAAGTCGTGTGTCTCCATGGAATCCCTAAAACCAGAGTCTCAGATTGTGACATCAAAATTTTTAGTCATTTTTTGCGATCACTGGAAAAACATTGATACCACTCTCAAATACAGTACCACAAGCCATCCACAAACAGATAACCAAATCAGAGTTATTTATCGATCTTTGGGGAGTCTTATACATTGTCTCACTGCTGAAAACATCCTAAATAATGGAACTTTTCCTTAGCCAAGCTGAATTTGCCTTCAATCATGTGAAGAACGGATCCACAGGGAAGTTCCAATTGGAGAGAGTATATACTAAACTTCCTAGGTTAACTGTGGATCTTATTTTACCTTCATCTGGAAACCGAATAAATGGCTGAACGGGTGGTAGAGCTACATAAGGAGGTTCAAACTCGTTGAAAAAGCTTACTTGGACTACAAGAAGACAGCTAATAGAAAAAGGCGAATTACTAACTTTGCAGTGGGCAATTTGGTTAAGGTTCATCTCAAGAATTCTCGTTTGCCAGTTGGTTCATATAACTAATTAAAGAACTGCAAGCTTGGACCTTTCAAAATCTTACAACGTCTTGATGCCAACTCTTATAAGATCATGCTTCCTTCTTACTTAAATTATTAATCCCATTTTCAATGTTGCTGATATTTTTCCGTATGAAGCACTTGAAAGGCTTTCCTTACCACCTAAACTCGAGGACATGTTTATTACTTACTTTATTAACTTTTTTTTACAGTGGTTAATTGGTTGTTATCATTGAGTTGTTTGTCCAGCCTTGTTATGTATACATAAAGGGTTGTTATGTACTTGAAGGAAAAAATTTCATTTAATTAAAACCACCATGGTTTGGCCTAGTGACCAATAGGGGCGGTGTAAATAATAGAAGGCTAGGAGAGTATGAGTTCAAATCATCGTGGCCACCTATCTAAGATTTAACATGATACGAGTTACTTTGGAAACCAAATGTAATAGGGTTGGTGGTTATTTCGTGAGAACAGTCCAAGTGCGCGCAAGCTGATTCAGATACTCACAAGTATAAAAATAAATCTTCATTTAACTAAAAAACTTTAATTTGGTCGGCACCACTTTTGGATTGCTTCGTGAGGCACTATACAAATTTTTTACCTGCAATTGAGGGGTTGCTTTTGAGGACAGTGTACATAGTCTGATGCAACAGGCCTTTTGCAGTTAGCTAGAATGGATTTATCTACACGTCCATTTGAATTTTTGGTTCCACTGGATTTCATGTTCATGACTTGACCATTAAGCAAGATTTCTCTTATATGGGAGGTCTTGATAAGAATGTTTGCCCCTCGGTTCACTTTACCTATAGAGGAGCAAGGTAGCAAAAGGTAATGAGTAGTTGGTTATTGGGAGTGGGAGTGGGAGTGAGCATTTCTAATGTGCGAGTCTGGGCCTTATCTAGTAATAACGGACACAAGTATAAGTTTTTGTTAGGGATCTGTTTGGGTGAGGGTATATATATTAGACAGTAGCAGCAACCATGATTGGGTATTCTGGTTTATCTGGTATTTTGGCCTAGAATATACCGTGTGAAATCAGAGTTCCAATCCTTTTTAAGAGCAGGGGATACTAGATTATTTTCTTGAAAACTCATGTTTGTCACCTACCTAGGTATTAAAATACTATGAGTTTGCTAACAACCAAATATTGTAAGGCTTAGTGGCTGTCTCATGAAATTAGTTACGGAAAACGCCCATGAATATGTATACAGCTCAGTTCCTTTGTTTGCATGAGGCAATAGTCATTTTGAGACCTATCAGGCTTCAGAGCCCTTTCTCTTCTTTTAAATGATTGTGTTTGGTTTCAATTTTGTCCATGGTTCGATTAGAATGCTTGTAACATCCCTGGATTTGATAAATGTTAATAGTTTTCTTGCACGACACATCCTCTTTGGACACCAACCCATCACCATGCCTCTTGCCAAAGAAAACACGTCACATGAGACAACTGCCAAGTCATAGATGTTTTCAGAAATTTTACAAAACCACAATAACCAAATTGAAACATTTAAATACATCCGAACTATTGCAGCCTCACGCAAACTAATCATAGGACTAAAATGGTAATACTTACTGTTTTCTACATGACATTGACTAGACTCCTGTTCATTTGGAATGGTTTTTATTAATAGGTCGGTTTAAAAATGTTTTTGGGGGTGAATGCATCGGTGACCAACTGGGATACTGAAGGCACATGCTGCAGTATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTATTGCAACATTTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGAGTTCTCTGCACGTTTTCTTAATCTTGCTTAATATTATCGCCCACCATTATGGCTCTCCTTGATTTTGTTCTTCTCAATTTGTTTCTTTCATTTCTTCGACTTCATATTATTCCTTGGCGAAAATGTTTTTCCTTCTGCTTCAAAATCATGATCTGCAAAACATTTATGTTATAAGGTCATTTGTCTTAACTTTGCTTTGTGAGGAAATGCTTATTTTATTTCGTTTTTTTTTTTTTTTAATTTTTTATTTTTTATATAGAGAGAATTACTCGGTCTTCATAATCGAGATCAATATTGAATTTGTAAACAGGAAAAACATTGAGGTATATTTTCAAAACTTGGTTTGTATGAATTTTGTGTGTTTTAAAATCATTTTCAAGACAGGGTTCCCAAATGCGGTTCCTGTAGATTTATAAAAGTTCTTGCTTTCTAACACATTAAAATGAAAGTGGACATTAACTGTATTTGTGAAGGTACTGTTTCTGCCATATGATTGTACAAAATACATTAAATGTTCTACTCTACGACATCTTAAATTTAAACTTTGAACTTAAAAGGTTAAAGTCTACGTAAAACTAAATTGACAAATCACTTAAGAACTGGCACAGAATTCAACAAATAGAACAAATATTCACAATGAGGAAAATATCCTAAACTCCTCAAATCTTCCTTAGAAAATCTAACTTACACAACTAAAAGAACCCACATTGTAAGCAATCGTCTTCATTTTAAAGTTTTTTAAAAGAAAACTTGATTAGTTAAATTGAAAGGTCAAAAGATAAATTTTTTTCTTTGATCTTATAAATCTGGAGGCTGATATTTTCTTACTTTCTGATTGTGTTGTGTTGTCGGGTCAGGTGTCCATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAGAGGAGACGACATGTTCGAATTACAAGTAAAATTGCTGAAGCAAATTCCCGAAGAGTACCCATACAAAGACGACGAGTAGCATATCTCAACCAGGAAAAAGGAACTCTTTTATTTCATGTCATCTGCCAGTATGTTCATTTGATCTAAAAACAATAGGTACATTTTTTGACTTCTCGAACTAATGTTACTTTATCAAAGTTATGTTATAAATAGTCTTATGCGACAGTGATCAATTAAGTTCAATGTATATAGTGAAGGACTTAAAAAGGATTCACGTTTTGGTTGAGGTGCTTAGGATTTTGTCCTGCGGTAGCTGAGTTTCTTGTGTGGTGTTTAAACTCTTTGGCCATTTATAGTTCATTTCTTATGGATTCAGTTGTCTGCTACTGGTCATTGGTTGCTGCATTTGTGATTGTTTGGTTTTGATTATATAGTCTTTGGCTACTGTGATCTATAAATGTCAATGCAGAGGAAGCGGATTCAAAGGAAATGAATTCAAGTCGTGGCGGAGGTATCTAAGATTTTAGTTGATTGTCTCGTGAGAATAGTTGAGGTACATACTAGCTGCCTAGACCCTCACGGATGTTAGAAAGTAACCCTTTTGCTATCTCATGAGTTTTAAGTCGTTTGCATTTGATTTTTTGATGTGTTTGGTTAGTCTGGCATAGGCAGTTACATTTTCTGATTTGTCGAACCAACTAACTTCTTAATAAACGTTACATTATATGCAGTCTTTTTTGTTATCGGGTCCATAAAGGTCGAGGTATATGGTAAATGACTTAAAAT

mRNA sequence

ATGCCTCCTGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCCGAGCTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAGTTGCTCACGGATCTGGAGGAGGTCGAAGAAGTTAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCCGGTTGATTGACGAGTTTCTTGCAAAATCCAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGTTTAAAAATGTTTTTGGGGGTGAATGCATCGGTGACCAACTGGGATACTGAAGGCACATGCTGCAGTATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTATTGCAACATTTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGTCCATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAGAGGAGACGACATGTTCGAATTACAAGTAAAATTGCTGAAGCAAATTCCCGAAGAGTACCCATACAAAGACGACGAGTAGCATATCTCAACCAGGAAAAAGGAACTCTTTTATTTCATGTCATCTGCCAGTATGTTCATTTGATCTAAAAACAATAGGTACATTTTTTGACTTCTCGAACTAATGTTACTTTATCAAAGTTATGTTATAAATAGTCTTATGCGACAGTGATCAATTAAGTTCAATGTATATAGTGAAGGACTTAAAAAGGATTCACGTTTTGGTTGAGGTGCTTAGGATTTTGTCCTGCGGTAGCTGAGTTTCTTGTGTGGTGTTTAAACTCTTTGGCCATTTATAGTTCATTTCTTATGGATTCAGTTGTCTGCTACTGGTCATTGGTTGCTGCATTTGTGATTGTTTGGTTTTGATTATATAGTCTTTGGCTACTGTGATCTATAAATGTCAATGCAGAGGAAGCGGATTCAAAGGAAATGAATTCAAGTCGTGGCGGAGGTATCTAAGATTTTAGTTGATTGTCTCGTGAGAATAGTTGAGGTACATACTAGCTGCCTAGACCCTCACGGATGTTAGAAAGTAACCCTTTTGCTATCTCATGAGTTTTAAGTCGTTTGCATTTGATTTTTTGATGTGTTTGGTTAGTCTGGCATAGGCAGTTACATTTTCTGATTTGTCGAACCAACTAACTTCTTAATAAACGTTACATTATATGCAGTCTTTTTTGTTATCGGGTCCATAAAGGTCGAGGTATATGGTAAATGACTTAAAAT

Coding sequence (CDS)

ATGCCTCCTGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCCGAGCTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAGTTGCTCACGGATCTGGAGGAGGTCGAAGAAGTTAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCCGGTTGATTGACGAGTTTCTTGCAAAATCCAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGTTTAAAAATGTTTTTGGGGGTGAATGCATCGGTGACCAACTGGGATACTGAAGGCACATGCTGCAGTATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTATTGCAACATTTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGTCCATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAGAGGAGACGACATGTTCGAATTACAAGTAAAATTGCTGAAGCAAATTCCCGAAGAGTACCCATACAAAGACGACGAGTAG

Protein sequence

MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYPYKDDE

Homology

[Close]

BLAST of Carg05646 vs. NCBI nr
Match: KAG6607818.1 (Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.5 bits (968), Expect = 6.7e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 48  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 107

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF
Sbjct: 108 IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 167

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 168 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 227

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 228 PYKDDE 233

[Close]

BLAST of Carg05646 vs. NCBI nr
Match: KAG7015216.1 (Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 6.7e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. NCBI nr
Match: XP_022941300.1 (trafficking protein particle complex subunit 3-like [Cucurbita moschata])

HSP 1 Score: 374.4 bits (960), Expect = 5.7e-100
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. NCBI nr
Match: XP_022981618.1 (trafficking protein particle complex subunit 3-like [Cucurbita maxima])

HSP 1 Score: 374.0 bits (959), Expect = 7.4e-100
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. NCBI nr
Match: XP_023525556.1 (trafficking protein particle complex subunit 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLE+VEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEDVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPD CQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDACQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. ExPASy Swiss-Prot
Match: Q5ZI57 (Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPPC3 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-51
Identity = 94/165 (56.97%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAK+  KM+LG+  S+TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  +V +++D L+GD + E+++K +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176

[Close]

BLAST of Carg05646 vs. ExPASy Swiss-Prot
Match: O55013 (Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trappc3 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.9e-50
Identity = 93/165 (56.36%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  S+TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D L+GD + E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Carg05646 vs. ExPASy Swiss-Prot
Match: Q5U1Z2 (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.9e-50
Identity = 93/165 (56.36%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  S+TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D L+GD + E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Carg05646 vs. ExPASy Swiss-Prot
Match: O43617 (Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC3 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-50
Identity = 92/165 (55.76%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  S+TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D L+GD + E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Carg05646 vs. ExPASy Swiss-Prot
Match: Q86K94 (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=trappc3 PE=3 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 100/174 (57.47%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 9   GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS 68
           G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS
Sbjct: 9   GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKS 68

Query: 69  NISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDFVELPDTCQ 128
            I RC DF ETA+VIAKVG KMFLGVNA V +WD       + +EDNPL+DFVELPD  +
Sbjct: 69  GIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYK 128

Query: 129 -GLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEYP 182
             L+Y NIL GV+RGALEMV MK + T+++  L  D   E++V L + + +  P
Sbjct: 129 HKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182

[Close]

BLAST of Carg05646 vs. ExPASy TrEMBL
Match: A0A6J1FT71 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111446643 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.8e-100
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. ExPASy TrEMBL
Match: A0A6J1J2K9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111480683 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.6e-100
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. ExPASy TrEMBL
Match: A0A6J1CFG3 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111010320 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.2e-99
Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNA+VTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETAEVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. ExPASy TrEMBL
Match: A0A5A7TX50 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00240 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. ExPASy TrEMBL
Match: A0A0A0LAM3 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3G419290 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+VTNWD EGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. TAIR 10
Match: AT5G54750.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 340.5 bits (872), Expect = 8.5e-94
Identity = 162/186 (87.10%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTCCSIVLEDNPLVDF 120
           IDEFLAKS +SRCVDFKETA++IAKVG KMFLGV ASVT+WD++GTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180
           VELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD +ELQVKLLKQ+ EEY
Sbjct: 121 VELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYELQVKLLKQVAEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Carg05646 vs. TAIR 10
Match: AT5G54750.2 (Transport protein particle (TRAPP) component )

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-91
Identity = 162/199 (81.41%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------- 60
           M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM        
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMYSSSTIYV 60

Query: 61  -----GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNASVTNWDTEGTC 120
                GYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG KMFLGV ASVT+WD++GTC
Sbjct: 61  DSLPWGYNIGIRLIDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTC 120

Query: 121 CSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFE 180
           CSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD +E
Sbjct: 121 CSIILEDNPLVDFVELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYE 180

Query: 181 LQVKLLKQIPEEYPYKDDE 187
           LQVKLLKQ+ EEYPYKDDE
Sbjct: 181 LQVKLLKQVAEEYPYKDDE 199

The following BLAST results are available for this feature:

BLAST of Carg05646 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607818.1	6.7e-101	100.00	Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma ...	[more]
KAG7015216.1	6.7e-101	100.00	Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma ...	[more]
XP_022941300.1	5.7e-100	98.92	trafficking protein particle complex subunit 3-like [Cucurbita moschata]	[more]
XP_022981618.1	7.4e-100	98.39	trafficking protein particle complex subunit 3-like [Cucurbita maxima]	[more]
XP_023525556.1	2.2e-99	98.39	trafficking protein particle complex subunit 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05646 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZI57	2.3e-51	56.97	Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPP...	[more]
O55013	1.9e-50	56.36	Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trapp...	[more]
Q5U1Z2	1.9e-50	56.36	Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=...	[more]
O43617	5.6e-50	55.76	Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]
Q86K94	2.8e-49	57.47	Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44...	[more]

BLAST of Carg05646 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT71	2.8e-100	98.92	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J2K9	3.6e-100	98.39	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CFG3	5.2e-99	97.31	Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7TX50	1.5e-98	97.31	Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LAM3	1.5e-98	97.31	Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]

BLAST of Carg05646 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54750.1	8.5e-94	87.10	Transport protein particle (TRAPP) component	[more]
AT5G54750.2	5.2e-91	81.41	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 4..185 e-value: 7.4E-90 score: 301.3
None	No IPR available	PANTHER	PTHR13048:SF5	PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED	coord: 1..186
IPR016721	Bet3 family	PIRSF	PIRSF018293	TRAPP_1_Bet3	coord: 4..185 e-value: 3.4E-79 score: 262.2
IPR016721	Bet3 family	PANTHER	PTHR13048	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3	coord: 1..186
IPR016721	Bet3 family	CDD	cd14942	TRAPPC3_bet3	coord: 20..174 e-value: 3.30849E-102 score: 289.025
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 24..171 e-value: 1.4E-35 score: 122.2
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 18..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05646-RA	Carg05646-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0033106	cis-Golgi network membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0030008	TRAPP complex