Carg05487 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05487
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Acyl carrier protein
Location	Carg_Chr17: 1732083 .. 1735819 (-)
RNA-Seq Expression	Carg05487
Synteny	Carg05487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGCCAGGTAAATCGTTTTTCCTCCGCTTTTTAGTTCGCTTTTAGGACTTTTAGTTGTAAATTCAAGTTACTTTTGCTCGGAACTTTGTTAATTTGGTTCCATGAATCTATTGATTGCGTGCTTTACTTCTGCTGAGTGTTTCCAGGATCTGATTTGTTTTCTTGAAATGTATGTGTTTGTTCCATGCGATTAAAGTTACAGAGTACTGTTTTGGCTACTGAGATTTTTTGTTGAGATTGCACGAGATTTTTATTCTTGAAGATTTGACTAGATTACATTCGGTGCACAATGATAGATCTGATTAAGTTATTTCGCATCCTTGAGTTTTGGCGTCGGATTTGATTGTAGAATCTTTCTTTTAAGATCGAGAAGTGAACTAATTTTCATATTAAACGTGTTATCTTATTTTTAATGCTTCTGCTGCATTATTCGAGCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGTAAGTGCTCTTCTGATGTATTTATTTAATCGTCAGCGTCGTTATCCTTTTAAGTTTTTTCTGTATATAGTACATACTGTTTCAAAACTATTCTTGTTTGCTCATATTGTTCTCTCTGAAATTGTTGCAACAAATAGGCTAGTAATAACTGAACTCAATTCAACAGCAGGTCATATACTAGATCCCAGTCCTCTTTTATGATATGACATGTGGCTGTTTATTATATGTGATTCTCTCCTTTTCTTTTTGTAGTTCTCTGTTTCTGCAGATTATGATTGTGTGAGACTAGCGGATAAGACTTCCATACACATCAAAAAGTTTGAGATAGATAGATGAAAACTGCTAGAACAAATCTGCTTAGATAGCTGCTGTTGTCTGTTTTAGAATTTCATCATCACATTTTCGTTGACTCTGATAATCTTTCACAATTGTGAAAGAGCTACTGTATTCTCATTGATCAGAAACATTACAACTCAGTCTATTTTTAAGACTTTAGACTACTGAATACATCTTGACAAACTAACAGAGTAACAAAACGAACACTCGACTATTAACGTAAATTGTATTCCTAAATGTTATAGAGCTCTTTTTTTCTTGCATCCATACGATAATGTTACGTAACTTATGAAACTCTTGGACAGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTGAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTAACAAATGTTCTTCAACGTATTATACTTGTGCAATATATTGTAAAATGGTATCTCATTTTCACTGCAGAAGCATCTACCTCCTCTGAATGATCATTCTTTTTTTTTTTTTTTTGTTTTTGAGAATTAAGAATATAAACAATGCTTTCACCCCTGAATTTCTTTGTTTTTTTTTTTTTCTTTGGAAACATCGCCAAGTTTTAAAAATTAAAAACAAGTAAAATGTTTCTGTTTTTAGAATTTGACTAAAAATTTAAATCTTACTTTACAAGGGGTGATTGTTGTTTAGAAAACGAACCTCTTTTTTTCAAAATAAATAACTAAATAGTTATCAAATAGGTTGGTCTTAGTTATTTTCTATTTTCTTTGTTTGGATGCCATTTGATTCCATTTGGTGTTTATCATTTGTCAAAAATAGGATCGATTGAACTTTCACTTCTGAGTTTCTTTGTTTGCAAAACATTATCATAGTTTTGAAAATTTTGAAAATAAATTGCAAAAATATGTTTCATTTGTCAAAAATAGGATCGATTGAACTTTCACCCATGAGTTTCTTTGTTTGCGAAACATTTTCAAAATTTTGAAAATTTTAAAAATAAATTGCAAAAATATGTTTTTGTTTCTAGAATTTGGTTAACATCCTTTTATTACTATTATGAGAAAACTAGGTCATTTTTTTTTGTCTTAGTTATTTTCTATTTTCTTCGGTTGTGTCGTCTCATTTGATTTCGATTCATGTTTATCGTTTTTCAAAAATAAAAATAGGATCGATTGAATTCATTCCATTTTCTAAAAAAGAAAAAAAAAAAAAAAAAGCAATGGAAAATAGATTTCAAAACCGGAAAACGAGTTTTTAAAATAAATTTCTTTAATTTTTCCAAAATTTTACTTTTAGACACCCAATCTTTCCCTCAGCATATATTCCCTCAAACATGTGTCTCCCCAATTTACTTATTCTCTCTGTATACTTTTTTTTTTTTCTCTCTAATCATATCTATTGTCAAACATGGTTCGCTTTTCCATTTCTTATGTAGCTATCAACCATTTTTGGTTTTTAATAAACATGAAATAGTAACAAACAAATATAAACAAAAAAGGGTTAGTTTCTGTCGCCTTGTTTCAATGGGGCCGGTTGTAGAAGACGTTAAAGGAAAGAAAATCTGTTTGGGCATGATAACCATTTTAAAAGGTTTTCAATTTTATTTTAACTTTTTATATTTAGTATAAAAGGTTAAAATAAAATGTTCTAGAAAATTGGGTCATTTATCCATTGAGTTAAGCACAAATTGGCATGCTTTATTCTTTGATAGTATTAGATAATAAACATGAGCTTTCGTGATAATTAGAAAAGTTAATTCATTTAGTCTATTTTTTCCGGCATTTTTCACCCACTCTCTCCCTTTGGGTTCGCCGGGTCGGATCTTATTTTTATTTATTTATTTATTTTGTGCTTGATGAAGTGTTATTTTATTATTTTTTTAAATTTTTTTTTAGAATAAAGTAAAGGGGTGTGAAAAATAATTTAACGAAGTTATTGAATGGATGTGTAGGTTGAGATCGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAAATCTAATTTCGTAGTTCCGCCCGTATTCTAGATCTCTCTCTCTCTGGATTTTGGTAGCTTCTCTTTCTTTCTTTCTATCCACGTTCTTTTCCTTTTCAAACTTCTTAGAAACGTTTTCTGCGTGGCCTCACTTCCACTTCGTCCTTATTTATATTTTCCTTGATTATTAAGTTTCTGGGAATCCTCCATTTATTTCTTACTGCTACCATTGCGTCTCTAATTGTTTTTTATGCTCATTGGATCAAGATCTACAAGGCTTGATATTTTTTTAGACAAAATTCTTGACCAAACTTAAATAAATATTTAACACAATAATGGTAAATCTCAAAAAGCCCTATCTTGAGGAGTAGGTTGAGAATCTTTCTTACATATACAAAAATATCTAAAATATGAGTCATAATATGTAGTTAATTTTGAAATGAAACTTTTTGTAATACAGTTTAATATAAACAATTACATTGCGAGAAAAACATTTCACTTTGGAATAATTTGCCTTTCGAAATTCATTCGATAATGTTCGGTTTAAAATTCTGCAAATTTCTAAAAGAATATAACCCCTACAGACCGAAAAATATAAAATAAAAGCTGAGCCTGAACAAATCAAACTGAAAAATGGAAGGGAATAAAAAATAAGCCACAAATTGGTTTACTTAAAAGTCCTATTTAATAGAATT

mRNA sequence

ATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGCCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTGAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTTGAGATCGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAAATCTAATTTCGTAGTTCCGCCCGTATTCTAGATCTCTCTCTCTCTGGATTTTGGTAGCTTCTCTTTCTTTCTTTCTATCCACGTTCTTTTCCTTTTCAAACTTCTTAGAAACGTTTTCTGCGTGGCCTCACTTCCACTTCGTCCTTATTTATATTTTCCTTGATTATTAAGTTTCTGGGAATCCTCCATTTATTTCTTACTGCTACCATTGCGTCTCTAATTGTTTTTTATGCTCATTGGATCAAGATCTACAAGGCTTGATATTTTTTTAGACAAAATTCTTGACCAAACTTAAATAAATATTTAACACAATAATGGTAAATCTCAAAAAGCCCTATCTTGAGGAGTAGGTTGAGAATCTTTCTTACATATACAAAAATATCTAAAATATGAGTCATAATATGTAGTTAATTTTGAAATGAAACTTTTTGTAATACAGTTTAATATAAACAATTACATTGCGAGAAAAACATTTCACTTTGGAATAATTTGCCTTTCGAAATTCATTCGATAATGTTCGGTTTAAAATTCTGCAAATTTCTAAAAGAATATAACCCCTACAGACCGAAAAATATAAAATAAAAGCTGAGCCTGAACAAATCAAACTGAAAAATGGAAGGGAATAAAAAATAAGCCACAAATTGGTTTACTTAAAAGTCCTATTTAATAGAATT

Coding sequence (CDS)

ATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGCCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTGAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTTGAGATCGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAA

Protein sequence

MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTVQEAADMIETIISKDGPKPAA

Homology

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BLAST of Carg05487 vs. NCBI nr
Match: XP_023547704.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575046.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013622.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QTITTVQEAADMIETIISKDGPKPAA 147
           QTITTVQEAADMIETIISKDGPKPAA
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Carg05487 vs. NCBI nr
Match: XP_022959041.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSV MPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA
Sbjct: 1   MFSIAGSSVYMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QTITTVQEAADMIETIISKDGPKPAA 147
           QTITTVQEAADMIETIISKDGPKPAA
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Carg05487 vs. NCBI nr
Match: XP_023006385.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIA SSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQV CAA
Sbjct: 1   MFSIARSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVSCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QTITTVQEAADMIETIISKDGPKPAA 147
           QTITTVQEAADMIETIISKDGPKPAA
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Carg05487 vs. NCBI nr
Match: XP_011656665.1 (acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN46190.1 hypothetical protein Csa_004843 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54
Identity = 118/140 (84.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPS+SAS   SQV++GRISGLKLV APLGKAIFPLRRN+R GSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPET+DKVV+IV+KQLAL EDS VNGESKF++LGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QTITTVQEAADMIETIISKD 141
           Q+ITTVQEAAD+IE +ISKD
Sbjct: 121 QSITTVQEAADLIEDLISKD 140

[Close]

BLAST of Carg05487 vs. NCBI nr
Match: XP_008458496.1 (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54
Identity = 117/140 (83.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPS+SASF  SQV++G+ISGLKLV APLGKAIFPLRRN+RQGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPET++KVV+IV+KQLAL+EDS V+GESKF +LGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QTITTVQEAADMIETIISKD 141
           Q+ITTVQEAAD+IE +ISKD
Sbjct: 121 QSITTVQEAADLIEDLISKD 140

[Close]

BLAST of Carg05487 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-34
Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPL-GKAIFPLRRNFRQGSLQVCCA 60
           M S+ G+S+SM S  AS   S+VSN     L+ VS P+ GK+  PLR   R     VCCA
Sbjct: 1   MASVTGTSISMASFKASLAPSRVSN-----LRSVSLPIKGKSFAPLR--MRSARFVVCCA 60

Query: 61  AKPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEES 120
           AKPET++KV  IVKKQLAL +DS V GESKF+ LGADSLDTVEIVMGLEE F INVEEES
Sbjct: 61  AKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEES 120

Query: 121 AQTITTVQEAADMIETIISK 140
           AQ+I TVQ+AAD+IE +I K
Sbjct: 121 AQSIATVQDAADLIEKLIEK 133

[Close]

BLAST of Carg05487 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 5   AGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPET 64
           AG+S+ + S S     S ++ GRIS L+ VS P+ +  FP  R+ +    +V C AKPET
Sbjct: 6   AGASICIKSASC----SPLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPET 65

Query: 65  MDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTIT 124
           + KV +IVKKQLAL +DS VNG SKFS LGADSLDTVEIVMGLEE F I+VEEESAQ+I 
Sbjct: 66  VAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQ 125

Query: 125 TVQEAADMIETIISKDG 142
           TVQ+AAD+IE ++ K G
Sbjct: 126 TVQDAADLIEKLMEKKG 138

[Close]

BLAST of Carg05487 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 83/138 (60.14%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 5   AGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFP-LRRNFRQGSLQVCCAAKPE 64
           AG+S+ +   SASF  S ++ GRIS L+ VS P+ +  FP L+ +    +L+V C AKPE
Sbjct: 6   AGASICIK--SASF--SPLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPE 65

Query: 65  TMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTI 124
           T+ KV  IVKKQLAL +DS VNG SKFS LGADSLDTVEIVMGLEE F I+VEEESAQ+I
Sbjct: 66  TVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSI 125

Query: 125 TTVQEAADMIETIISKDG 142
            TVQ+AAD+IE ++ K G
Sbjct: 126 QTVQDAADLIEKLMEKKG 139

[Close]

BLAST of Carg05487 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 82/135 (60.74%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 5   AGSS-VSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQG-SLQVCCAAKP 64
           AGSS + + S S S   +QV +G +S L+ VS P+   IFP  R+ R   S +VCC AK 
Sbjct: 6   AGSSLICIKSASCSLNRAQVPSG-LSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQ 65

Query: 65  ETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQT 124
           ET+ +V +IVKKQLAL EDS VNG SKFS LGADSLDTVEIVMGLEE F I+VEEESAQ+
Sbjct: 66  ETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 125

Query: 125 ITTVQEAADMIETII 138
           I TVQ+AAD+IE ++
Sbjct: 126 IQTVQDAADLIEKLV 139

[Close]

BLAST of Carg05487 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.3e-29
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 7   SSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPETMD 66
           SS+ + S S     S ++ GRIS L+ VS P+ +  F  RR     SL+V C AKPET+ 
Sbjct: 8   SSICIKSASC----SALAPGRISSLRSVSLPVSRKSFFSRRG--SFSLRVNCQAKPETVT 67

Query: 67  KVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTV 126
           KV  IVKKQLAL +DS V+G SKFS LGADSLDTVEIVMGLEE F I+VEEESAQ+I TV
Sbjct: 68  KVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTV 127

Query: 127 QEAADMIETIISKDG 142
           Q+AAD+IE ++ K G
Sbjct: 128 QDAADLIEKLMEKKG 136

[Close]

BLAST of Carg05487 vs. ExPASy TrEMBL
Match: A0A6J1H3R9 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111460148 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.7e-69
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSV MPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA
Sbjct: 1   MFSIAGSSVYMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QTITTVQEAADMIETIISKDGPKPAA 147
           QTITTVQEAADMIETIISKDGPKPAA
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Carg05487 vs. ExPASy TrEMBL
Match: A0A6J1KZZ3 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111499134 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIA SSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQV CAA
Sbjct: 1   MFSIARSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVSCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QTITTVQEAADMIETIISKDGPKPAA 147
           QTITTVQEAADMIETIISKDGPKPAA
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Carg05487 vs. ExPASy TrEMBL
Match: A0A0A0K8V5 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 118/140 (84.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPS+SAS   SQV++GRISGLKLV APLGKAIFPLRRN+R GSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPET+DKVV+IV+KQLAL EDS VNGESKF++LGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QTITTVQEAADMIETIISKD 141
           Q+ITTVQEAAD+IE +ISKD
Sbjct: 121 QSITTVQEAADLIEDLISKD 140

[Close]

BLAST of Carg05487 vs. ExPASy TrEMBL
Match: A0A5A7SWA3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001200 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54
Identity = 117/140 (83.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPS+SASF  SQV++G+ISGLKLV APLGKAIFPLRRN+RQGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPET++KVV+IV+KQLAL+EDS V+GESKF +LGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QTITTVQEAADMIETIISKD 141
           Q+ITTVQEAAD+IE +ISKD
Sbjct: 121 QSITTVQEAADLIEDLISKD 140

[Close]

BLAST of Carg05487 vs. ExPASy TrEMBL
Match: A0A1S3C7Z5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54
Identity = 117/140 (83.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60
           MFSIAGSSVSMPS+SASF  SQV++G+ISGLKLV APLGKAIFPLRRN+RQGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120
           KPET++KVV+IV+KQLAL+EDS V+GESKF +LGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QTITTVQEAADMIETIISKD 141
           Q+ITTVQEAAD+IE +ISKD
Sbjct: 121 QSITTVQEAADLIEDLISKD 140

[Close]

BLAST of Carg05487 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 68/137 (49.64%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 10  SMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPETMDKVV 69
           S+ + S SFK    +  ++  L+  S+           + +   LQ+ CAAK ET+ KV 
Sbjct: 3   SLSTTSLSFKAPSTTISQV--LRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 62

Query: 70  KIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTVQEA 129
            IVK+QLAL  D  +  ESKFS LGADSLDTVEIVM LEE F I+VEE  AQ ITT+QEA
Sbjct: 63  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 122

Query: 130 ADMIETIISKDGPKPAA 147
           AD+IE ++ K   KPAA
Sbjct: 123 ADLIEDLVQK---KPAA 134

[Close]

BLAST of Carg05487 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 13  SISASFKHSQVSNGRISGLK-LVSAPLGKA--IFPLRRNFRQGSLQVCCAAKPETMDKVV 72
           S S S + S ++  RIS  K  + +  GK    F LRR+     L V CAAK ET++KV 
Sbjct: 6   SASVSLQTSCLATTRISFQKPALISNHGKTNLSFNLRRSIPSRRLSVSCAAKQETIEKVS 65

Query: 73  KIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTVQEA 132
            IVKKQL+L  D  V  E+KF++LGADSLDTVEIVMGLEE F I + EE AQ I TV++A
Sbjct: 66  AIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQA 125

Query: 133 ADMIETIISK 140
           A++IE +I++
Sbjct: 126 AELIEELINE 135

[Close]

BLAST of Carg05487 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 98.2 bits (243), Expect = 5.8e-21
Identity = 68/149 (45.64%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 10  SMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPETMDKVV 69
           S+ + S SFK    +  ++  L+  S+           + +   LQ+ CAAK ET+ KV 
Sbjct: 3   SLSTTSLSFKAPSTTISQV--LRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 62

Query: 70  KIVKKQLALDEDSVVNGESKFSELGADSLDT------------VEIVMGLEEAFKINVEE 129
            IVK+QLAL  D  +  ESKFS LGADSLDT            VEIVM LEE F I+VEE
Sbjct: 63  DIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEE 122

Query: 130 ESAQTITTVQEAADMIETIISKDGPKPAA 147
             AQ ITT+QEAAD+IE ++ K   KPAA
Sbjct: 123 SDAQNITTIQEAADLIEDLVQK---KPAA 146

[Close]

BLAST of Carg05487 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-21
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 43  FPLRRNFRQGSLQVCCAAKPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVE 102
           F LRR      L V CA K ET++KV +IVKKQL+L +D  V   +KF+ELGADSLDTVE
Sbjct: 41  FSLRR-LMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVE 100

Query: 103 IVMGLEEAFKINVEEESAQTITTVQEAADMIETIISK 140
           IVMGLEE F I + EE A+ I TVQ+AA++IE ++ +
Sbjct: 101 IVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQE 136

[Close]

BLAST of Carg05487 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 11  MPSISASFKHSQVSNGR--ISGLKLVSAPLGKAIFPLRRNFRQ--GSLQVCCAAKPETMD 70
           M SI+ S   S  +  R  + G K V +    +   L  N RQ    L V CAAKPET+D
Sbjct: 1   MASIATSASTSLQARPRQLVIGAKQVKSFSYGSRSNLSFNLRQLPTRLTVYCAAKPETVD 60

Query: 71  KVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTV 130
           KV  +V+KQL+L E   +   +KF+ LGADSLDTVEIVMGLEE F I + EE AQ+I TV
Sbjct: 61  KVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATV 120

Query: 131 QEAADMIETII 138
           ++AA +IE ++
Sbjct: 121 EQAAALIEELL 131

The following BLAST results are available for this feature:

BLAST of Carg05487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547704.1	2.4e-69	100.00	acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575...	[more]
XP_022959041.1	1.2e-68	99.32	acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023006385.1	2.9e-67	98.63	acyl carrier protein 1, chloroplastic-like [Cucurbita maxima]	[more]
XP_011656665.1	6.3e-54	84.29	acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN46190.1 hypothetical...	[more]
XP_008458496.1	8.3e-54	83.57	PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459...	[more]

BLAST of Carg05487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93092	2.0e-34	62.86	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52414	2.1e-31	58.39	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P52411	2.3e-30	60.14	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P52413	2.3e-30	60.74	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]
P52412	7.3e-29	59.26	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]

BLAST of Carg05487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3R9	5.7e-69	99.32	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111460148 PE=3 SV=1	[more]
A0A6J1KZZ3	1.4e-67	98.63	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111499134 PE=3 SV=1	[more]
A0A0A0K8V5	3.1e-54	84.29	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1	[more]
A0A5A7SWA3	4.0e-54	83.57	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111...	[more]
A0A1S3C7Z5	4.0e-54	83.57	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1	[more]

BLAST of Carg05487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	1.2e-23	49.64	acyl carrier protein 4	[more]
AT3G05020.1	1.0e-22	51.54	acyl carrier protein 1	[more]
AT4G25050.2	5.8e-21	45.64	acyl carrier protein 4	[more]
AT5G27200.1	9.8e-21	56.70	acyl carrier protein 5	[more]
AT1G54630.1	8.3e-20	48.09	acyl carrier protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 60..140 e-value: 1.4E-23 score: 84.8
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 62..141
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 66..133 e-value: 2.1E-11 score: 44.0
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 62..137 score: 21.071661
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 63..134 e-value: 8.8E-24 score: 81.2
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 63..137 score: 16.391661
None	No IPR available	PANTHER	PTHR46153:SF20	ACYL CARRIER PROTEIN 2, CHLOROPLASTIC-RELATED	coord: 4..139
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 4..139
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 92..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05487-RA	Carg05487-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding