Carg05124 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05124
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glutaredoxin-C9-like
Location	Carg_Chr07: 3059601 .. 3059996 (+)
RNA-Seq Expression	Carg05124
Synteny	Carg05124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGAGCAATTCCTTACAGAACAATCGACACAAAACAGAGACTAGTGAGCGCGGCATTTCGGGGCAGTGGATCATGGCGCGATGTGAGTGCGTCCGTGTCGGAAAGTGCGGCGATAGTGTTTGCTAGAAGAGGGTGTTGCATGAGCCATGTGGTGAAGCGGCTGCTTCTCGGACTTGGAGCGAATCCGGCGGTGTATGAGGTGGAGGAAGACGAGGAATCCGGCGTGGTGGAGGAATTGGAGGCAATCGCGCAACTGGGGAACGGGAAGGTAGAGTTGCCGGCGGTGTTTATTGGGGGGGCCCTGTTTGGAGGGCTTGAAAGAGTGATGGCTACGCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA

mRNA sequence

ATGAACCGAGCAATTCCTTACAGAACAATCGACACAAAACAGAGACTAGTGAGCGCGGCATTTCGGGGCAGTGGATCATGGCGCGATGTGAGTGCGTCCGTGTCGGAAAGTGCGGCGATAGTGTTTGCTAGAAGAGGGTGTTGCATGAGCCATGTGGTGAAGCGGCTGCTTCTCGGACTTGGAGCGAATCCGGCGGTGTATGAGGTGGAGGAAGACGAGGAATCCGGCGTGGTGGAGGAATTGGAGGCAATCGCGCAACTGGGGAACGGGAAGGTAGAGTTGCCGGCGGTGTTTATTGGGGGGGCCCTGTTTGGAGGGCTTGAAAGAGTGATGGCTACGCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA

Coding sequence (CDS)

ATGAACCGAGCAATTCCTTACAGAACAATCGACACAAAACAGAGACTAGTGAGCGCGGCATTTCGGGGCAGTGGATCATGGCGCGATGTGAGTGCGTCCGTGTCGGAAAGTGCGGCGATAGTGTTTGCTAGAAGAGGGTGTTGCATGAGCCATGTGGTGAAGCGGCTGCTTCTCGGACTTGGAGCGAATCCGGCGGTGTATGAGGTGGAGGAAGACGAGGAATCCGGCGTGGTGGAGGAATTGGAGGCAATCGCGCAACTGGGGAACGGGAAGGTAGAGTTGCCGGCGGTGTTTATTGGGGGGGCCCTGTTTGGAGGGCTTGAAAGAGTGATGGCTACGCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA

Protein sequence

MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL

Homology

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BLAST of Carg05124 vs. NCBI nr
Match: KAG7026967.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

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BLAST of Carg05124 vs. NCBI nr
Match: KAG6604884.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.8 bits (647), Expect = 7.9e-64
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MNRAIPYRTIDTKQ LVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNRAIPYRTIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

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BLAST of Carg05124 vs. NCBI nr
Match: XP_022947652.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 6.7e-63
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MN+AIPYR+IDTKQ LVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

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BLAST of Carg05124 vs. NCBI nr
Match: XP_023533950.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MN+AIPYR+IDTKQ LVSAAF GSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 7   MNQAIPYRSIDTKQSLVSAAFGGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 66

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLG GKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 67  GANPAVYEVEEDEESGVVEELEAIAQLGKGKVELPAVFIGGALFGGLERVMATHISGDLV 126

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 127 PILKQAGALWL 137

[Close]

BLAST of Carg05124 vs. NCBI nr
Match: XP_022971131.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 6.3e-61
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MN+AIPYR+I TKQ  VS AFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

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BLAST of Carg05124 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-32
Identity = 74/124 (59.68%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 9   TIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYE 68
           T+    R +S   +G+G    V   V E+A IV  RRGCCM HVV+RLLLGLG NPAV E
Sbjct: 16  TVGESLRPLSLKTQGNG--ERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLE 75

Query: 69  VEEDEESGVVEELEAI-AQLGNGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAG 128
           ++E+ E  V+ ELE I  Q G G V+LPAV++GG LFGGL+RVMATHISG+LVPILK+ G
Sbjct: 76  IDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVG 135

Query: 129 ALWL 132
           ALWL
Sbjct: 136 ALWL 137

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BLAST of Carg05124 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-26
Identity = 73/140 (52.14%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 1   MNRAIPY---RTIDTKQRLVSAAFR-----GSGSWRDVSASVSESAAIVFARRGCCMSHV 60
           M +AIPY   R      R  +AA         G   +V  +V+E   +V  R GCC+SHV
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPVVVVGRSGCCLSHV 60

Query: 61  VKRLLLGLGANPAVYEVE-EDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVM 120
           VKRLL GLG NPAV+EV  E E +GVV         G G V LPAVF+GG L GGL+R+M
Sbjct: 61  VKRLLQGLGVNPAVHEVAGEAELAGVV--------AGGGGVALPAVFVGGRLLGGLDRLM 120

Query: 121 ATHISGDLVPILKQAGALWL 132
           A HISG+LVPILK+AGALWL
Sbjct: 121 AVHISGELVPILKEAGALWL 132

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BLAST of Carg05124 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-24
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 29  DVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLG 88
           +V  +V+ES  +V  RRGCC+ HVVKRLL GLG NPAV+EV  +        L+ +   G
Sbjct: 51  EVRRAVAESPVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGE------AALKGVVPAG 110

Query: 89  NGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
                LPAVF+GG L GGL+R+MA HISG+LVPILK+AGALWL
Sbjct: 111 GEAAALPAVFVGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of Carg05124 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 58/118 (49.15%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 28  RDVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQL 87
           R+V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV +D +   + +    A+ 
Sbjct: 19  REVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADPAALVDAALQARR 78

Query: 88  --------------GNGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
                         G   V  PAVFIGG L GGL+R+MA H++G+LVP+LKQAGALWL
Sbjct: 79  RKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGALWL 136

[Close]

BLAST of Carg05124 vs. ExPASy Swiss-Prot
Match: Q7XIZ1 (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-23
Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 30  VSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQ-LG 89
           V+   S +A +VF+  GCCM HVVKRLLLGLG  PAVYE+  D+ +   +   A++Q L 
Sbjct: 92  VARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYEL--DQLAAAADIQAALSQLLP 151

Query: 90  NGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
            G+  +P VF+GG L GG+E+VMA HI+G LVP+LKQAGALWL
Sbjct: 152 PGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

[Close]

BLAST of Carg05124 vs. ExPASy TrEMBL
Match: A0A6J1G719 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MN+AIPYR+IDTKQ LVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Carg05124 vs. ExPASy TrEMBL
Match: A0A6J1I2G5 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MNRAIPYRTIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           MN+AIPYR+I TKQ  VS AFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120
           GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 132
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Carg05124 vs. ExPASy TrEMBL
Match: A0A6J1JFY3 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 102/145 (70.34%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 1   MNRAIPYR---TIDTKQRLV-----------SAAFRGSGSWRDVSASVSESAAIVFARRG 60
           M++AIPYR   +IDTKQ  +           SA   G GS  DV ASVSE+AAIVFARRG
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 86

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEE++ESGV++ELEA A+  N +++LPAVFIGG LFGG
Sbjct: 87  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 146

Query: 121 LERVMATHISGDLVPILKQAGALWL 132
           L+RVMATHISG+LVPILKQAGALWL
Sbjct: 147 LDRVMATHISGELVPILKQAGALWL 171

[Close]

BLAST of Carg05124 vs. ExPASy TrEMBL
Match: A0A6J1FV54 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.4e-44
Identity = 101/145 (69.66%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 1   MNRAIPYR---TIDTKQRLV-----------SAAFRGSGSWRDVSASVSESAAIVFARRG 60
           M++AIPYR   +IDTKQ  +           SA   G GS  DV ASV+E+AAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEE++ESGV++ELEA A+  N +++LPAVFIGG LFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LERVMATHISGDLVPILKQAGALWL 132
           L+RVMATHISG+LVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of Carg05124 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 7.5e-44
Identity = 103/148 (69.59%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 1   MNRAIPYR---TIDTKQRLV--------------SAAFRGSGSWRDVSASVSESAAIVFA 60
           M++AIPYR   +IDTKQ  +              S    G G  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+E+ ESGVV+ELEA A+  N  ++LPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLERVMATHISGDLVPILKQAGALWL 132
           FGGL+RVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Carg05124 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-33
Identity = 74/124 (59.68%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 9   TIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYE 68
           T+    R +S   +G+G    V   V E+A IV  RRGCCM HVV+RLLLGLG NPAV E
Sbjct: 16  TVGESLRPLSLKTQGNG--ERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLE 75

Query: 69  VEEDEESGVVEELEAI-AQLGNGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAG 128
           ++E+ E  V+ ELE I  Q G G V+LPAV++GG LFGGL+RVMATHISG+LVPILK+ G
Sbjct: 76  IDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVG 135

Query: 129 ALWL 132
           ALWL
Sbjct: 136 ALWL 137

[Close]

BLAST of Carg05124 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 28  RDVSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQL 87
           R  +  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ E++ +           +
Sbjct: 54  RSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNN-------YDNI 113

Query: 88  GNGKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
            + K +LP ++IGG LFGGLE +MA HI+GDLVP L+QAGALWL
Sbjct: 114 VSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Carg05124 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 34  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVE 93
           +SE + ++F++  CCMSH +K L L LG NP +YE++E      +E   A+AQLG     
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIE--HALAQLGCSPT- 67

Query: 94  LPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
           +P VFIGG L GG  +VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Carg05124 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 4.4e-20
Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 35  SESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVEL 94
           SE + ++F++  CCMSH +K L L LG NP +YE++E      +E  +A+AQLG     +
Sbjct: 9   SEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIE--QALAQLGCSPT-V 68

Query: 95  PAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
           P VFIGG L GG  +VM+ H++  L+P+LK+ GALWL
Sbjct: 69  PVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]

BLAST of Carg05124 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 9.7e-20
Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 30  VSASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEDEESGVVEELEAIAQLGN 89
           ++  V E   +++++  CCMSH +K LL   GANPAVYE++E      +E  +A+ +LG 
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIE--QALLRLGC 63

Query: 90  GKVELPAVFIGGALFGGLERVMATHISGDLVPILKQAGALWL 132
               +P VFIGG L GG   VM+ H++G L+P+LK+AGALW+
Sbjct: 64  SPA-VPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:

BLAST of Carg05124 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026967.1	1.6e-64	100.00	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6604884.1	7.9e-64	99.24	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947652.1	6.7e-63	97.71	glutaredoxin-C9-like [Cucurbita moschata]	[more]
XP_023533950.1	2.2e-61	96.18	glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971131.1	6.3e-61	95.42	glutaredoxin-C9-like [Cucurbita maxima]	[more]

BLAST of Carg05124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	3.7e-32	59.68	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	4.0e-26	52.14	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	1.3e-24	56.31	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q0JP62	1.4e-23	49.15	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q7XIZ1	4.1e-23	55.34	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1	[more]

BLAST of Carg05124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G719	3.2e-63	97.71	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1	[more]
A0A6J1I2G5	3.0e-61	95.42	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1	[more]
A0A6J1JFY3	1.5e-44	70.34	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1	[more]
A0A6J1FV54	3.4e-44	69.66	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1	[more]
A0A5A7VGI4	7.5e-44	69.59	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]

BLAST of Carg05124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	2.6e-33	59.68	Thioredoxin superfamily protein	[more]
AT1G03850.2	1.1e-23	51.92	Glutaredoxin family protein	[more]
AT4G15700.1	6.8e-21	47.96	Thioredoxin superfamily protein	[more]
AT4G15670.1	4.4e-20	46.39	Thioredoxin superfamily protein	[more]
AT5G18600.1	9.7e-20	44.12	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 32..131 e-value: 1.7E-37 score: 125.4
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 23..131
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 40..102 e-value: 3.8E-9 score: 36.6
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 24..130 e-value: 2.2E-22 score: 80.8
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 23..131
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 27..130 score: 17.692394
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 33..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05124-RA	Carg05124-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity