Carg05113 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg05113
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein FAR1-RELATED SEQUENCE 7-like
LocationCarg_Chr08: 1668077 .. 1668931 (-)
RNA-Seq ExpressionCarg05113
SyntenyCarg05113
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTTTGCATTTTCCAATAATCCCTAAAACAAACCTTCTTGCCGGAAATCTTCTCCGACCGCATCTCAGATTCCGCCATGGAAGAGTAAGTAAGCTCAATCTCTCTCTCTCTTCGTTTCGTTTCGTTTTTTCATCTCATTTCCCTCTGTTTCTGATCAGATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGATTCATGATGATGATGATGATATACACGCTATGTGTTCTCAATTTGAGTTTGCTCAATGTTAAAAGACTTCATGAACTCAAAGATTAATTTACTTCGCCT

mRNA sequence

TTTCTTTTGCATTTTCCAATAATCCCTAAAACAAACCTTCTTGCCGGAAATCTTCTCCGACCGCATCTCAGATTCCGCCATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGATTCATGATGATGATGATGATATACACGCTATGTGTTCTCAATTTGAGTTTGCTCAATGTTAAAAGACTTCATGAACTCAAAGATTAATTTACTTCGCCT

Coding sequence (CDS)

ATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGA

Protein sequence

MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAFMH
Homology
[Close]
BLAST of Carg05113 vs. NCBI nr
Match: KAG6593070.1 (hypothetical protein SDJN03_12546, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025481.1 hypothetical protein SDJN02_11976 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAFMH
Sbjct: 181 VLVSSALLVYISTAIYAFMH 200

[Close]
BLAST of Carg05113 vs. NCBI nr
Match: XP_023004749.1 (uncharacterized protein LOC111497959 [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASALGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]
BLAST of Carg05113 vs. NCBI nr
Match: XP_022960345.1 (uncharacterized protein LOC111461098 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]
BLAST of Carg05113 vs. NCBI nr
Match: XP_023514650.1 (uncharacterized protein LOC111778883 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 5.0e-94
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIAS SSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]
BLAST of Carg05113 vs. NCBI nr
Match: XP_038899808.1 (uncharacterized protein LOC120087035 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 5.2e-83
Identity = 181/200 (90.50%), Postives = 186/200 (93.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPK   NGR R D+ R    SS SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKHPYNGRSRADELR---TSSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAVAAL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAFMH
Sbjct: 181 VLVSSALLVYISTAIYAFMH 197

[Close]
BLAST of Carg05113 vs. ExPASy TrEMBL
Match: A0A6J1KX75 (uncharacterized protein LOC111497959 OS=Cucurbita maxima OX=3661 GN=LOC111497959 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.4e-95
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASALGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]
BLAST of Carg05113 vs. ExPASy TrEMBL
Match: A0A6J1H8T5 (uncharacterized protein LOC111461098 OS=Cucurbita moschata OX=3662 GN=LOC111461098 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.4e-95
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]
BLAST of Carg05113 vs. ExPASy TrEMBL
Match: A0A5A7UUP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00520 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82
Identity = 178/200 (89.00%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R ++ +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRREEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAVAAL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]
BLAST of Carg05113 vs. ExPASy TrEMBL
Match: A0A1S3BRT3 (uncharacterized protein LOC103492593 OS=Cucumis melo OX=3656 GN=LOC103492593 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82
Identity = 178/200 (89.00%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R ++ +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRREEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAVAAL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]
BLAST of Carg05113 vs. ExPASy TrEMBL
Match: A0A0A0K8N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375740 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.6e-82
Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R ++ +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRAEEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAV+AL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVSALL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]
BLAST of Carg05113 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-71
Identity = 150/187 (80.21%), Postives = 161/187 (86.10%), Query Frame = 0 

Query: 14  GRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENS 73
           G   G       ASS SS +TTSVHV+ LDGLVNVNSLFTIAVFVGLSL TPGQHSLE  
Sbjct: 3   GAENGVRMTSPEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQR 62

Query: 74  SVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLR 133
           S CDA  DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR
Sbjct: 63  SSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLR 122

Query: 134 FGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYIST 193
           +GM+ASA GS+MGCLFLMLSMVNVIQIRLG+LSCGSKSA  AVA LV LVSSALL+YIST
Sbjct: 123 WGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYIST 182

Query: 194 AIYAFMH 201
           AIYAF H
Sbjct: 183 AIYAFWH 189

[Close]
BLAST of Carg05113 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-71
Identity = 150/187 (80.21%), Postives = 161/187 (86.10%), Query Frame = 0 

Query: 14  GRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENS 73
           G   G       ASS SS +TTSVHV+ LDGLVNVNSLFTIAVFVGLSL TPGQHSLE  
Sbjct: 3   GAENGVRMTSPEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQR 62

Query: 74  SVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLR 133
           S CDA  DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR
Sbjct: 63  SSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLR 122

Query: 134 FGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYIST 193
           +GM+ASA GS+MGCLFLMLSMVNVIQIRLG+LSCGSKSA  AVA LV LVSSALL+YIST
Sbjct: 123 WGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYIST 182

Query: 194 AIYAFMH 201
           AIYAF H
Sbjct: 183 AIYAFWH 189

[Close]
BLAST of Carg05113 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 204.9 bits (520), Expect = 6.0e-53
Identity = 116/198 (58.59%), Postives = 149/198 (75.25%), Query Frame = 0 

Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M +S+     NQN           S +S S++STTSVHVT LDG+V+ NSLFT+AVFVG+
Sbjct: 1   MADSDIETSSNQNSN---------SNTSHSTTSTTSVHVTALDGIVSANSLFTVAVFVGI 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           S   P   +L + + C AG DV R L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ D
Sbjct: 61  SFDQPSDLTLTDRTECSAGRDVERDLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           E F+A+IN  VLRFG++ +A GS++GC+FL+LS+V+VIQ+RLG+LSCG+  A+H V  LV
Sbjct: 121 EVFKANINRDVLRFGVVGAAGGSILGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLV 180

Query: 181 VLVSSALLVYISTAIYAF 199
           VLVSSAL VYI T  Y+F
Sbjct: 181 VLVSSALSVYIFTVFYSF 189

[Close]
BLAST of Carg05113 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-31
Identity = 82/172 (47.67%), Postives = 111/172 (64.53%), Query Frame = 0 

Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLT-TPGQHSLENSSVCDAGIDVARKLLVFEVV 93
           TTS+H+T LDG+VNVNSLFT+AVF+GL+   T   +SL     C     +A  L+ F V 
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVY 61

Query: 94  SFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRFGMLASASGSMMGC 153
           SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LRFGM+ S  GS+ GC
Sbjct: 62  SFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGC 121

Query: 154 LFLMLSMVNVIQIRLGMLSCGSKSAVH-AVAALVVLVSSALLVYISTAIYAF 199
            FLML+++NV+QI+LG L CG+    + AV  LV+LV SAL +Y+S  +YAF
Sbjct: 122 GFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]
BLAST of Carg05113 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24
Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 0 

Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSS-----------VCDAGIDV 93
           TT +HVT +DG+VNVNSLF++A+F+G  LTT G  +   SS           +   G  +
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLG--LTTSGNITFPVSSSASENHHLRRCISAKGPAL 77

Query: 94  ARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVL 153
           A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  L
Sbjct: 78  AERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAAL 137

Query: 154 RFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAA---LVVLVSSALLV 201
           R G++AS   S++GC FL +++V+++QI+LG L C  K + HA+AA   LVVLV SAL++
Sbjct: 138 RVGIVASCVASVLGCGFLTMALVDLVQIKLGPLEC--KRSFHALAAIVPLVVLVPSALII 197

The following BLAST results are available for this feature:
BLAST of Carg05113 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593070.14.1e-96100.00hypothetical protein SDJN03_12546, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023004749.11.3e-9498.50uncharacterized protein LOC111497959 [Cucurbita maxima][more]
XP_022960345.11.3e-9498.50uncharacterized protein LOC111461098 [Cucurbita moschata][more]
XP_023514650.15.0e-9498.00uncharacterized protein LOC111778883 [Cucurbita pepo subsp. pepo][more]
XP_038899808.15.2e-8390.50uncharacterized protein LOC120087035 [Benincasa hispida][more]
BLAST of Carg05113 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg05113 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KX756.4e-9598.50uncharacterized protein LOC111497959 OS=Cucurbita maxima OX=3661 GN=LOC111497959... [more]
A0A6J1H8T56.4e-9598.50uncharacterized protein LOC111461098 OS=Cucurbita moschata OX=3662 GN=LOC1114610... [more]
A0A5A7UUP52.8e-8289.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BRT32.8e-8289.00uncharacterized protein LOC103492593 OS=Cucumis melo OX=3656 GN=LOC103492593 PE=... [more]
A0A0A0K8N33.6e-8288.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375740 PE=4 SV=1[more]
BLAST of Carg05113 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07510.13.7e-7180.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G07510.23.7e-7180.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G01580.16.0e-5358.59unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G05950.18.4e-3147.67maternal effect embryo arrest 60 [more]
AT3G46890.14.5e-2441.88BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR33430MATERNAL EFFECT EMBRYO ARREST PROTEINcoord: 2..199
NoneNo IPR availablePANTHERPTHR33430:SF6MATERNAL EFFECT EMBRYO ARREST PROTEINcoord: 2..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05113-RACarg05113-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane