Carg04694 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04694
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MYB transcription factor
Location	Carg_Chr13: 9742541 .. 9743434 (+)
RNA-Seq Expression	Carg04694
Synteny	Carg04694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGGATGTGCAGCAGAGGCCACTGGAGACCTGCCGAAGACGACAAGCTTCGGGAGCTGGTGGAGCGATACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTTCTAGGAAGATCCGGTACGTAGATAGGTATATGAATTGATTGTGCCTAGGTAGGGCAGGAATGAATGAATGAATTAACGTGGATGTTCCTTCAGGGAAGAGCTGCCGGCTGAGATGGTTCAATCAGTTGGATCCCCGAATCAACAGAAGCCCGTTCACAGAAGAGGAAGAGGAGAGGCTAATGACGTCCCACAGGGTTCATGGGAACAGATGGGCCATTATTGCAAGGCTGTTTCCTGGCCGCACTGACAACGCCGTCAAGAACCACTGGCATGTCATCATGGCTCGCAAGTCCAGGGACAGCTCCAAAGCCAAAGCCAAAGCCAAAGCCAAAACCAAAACCAAAACCCTAACCCCATCATCTCAAAATCACCTTCTCTTTTCTTCCTTTCTGCAAACGTCATGTCCACCAAACAACAACGCTTCCCTCTTTCTCAACCACTCTCTATATCCAAACCCCATTTCTTCATTCATCCCCAAACCAACAGGTAAAGACTAATGCTACTATTTCATCGAGTAAAATTAAAATCCTCCTCCTCCTCCTCCTCCTCCTACCTATAATTATTATATATGTGTTTGTCTGAGCAGATAGAAGCGTGGAGTTTTACGACTTTCTCCACCTAAACGCTGAGTCCATTAACGCAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTGAACCAAGAAGCCACTGCCACCGCCGCCCGCCCGCTATTTCCATTCATTGATTTCTTTTCTGCCCAAACCTCCAACTCCATCTCATCCTCACATAATTAA

mRNA sequence

TTTAGGATGTGCAGCAGAGGCCACTGGAGACCTGCCGAAGACGACAAGCTTCGGGAGCTGGTGGAGCGATACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTTCTAGGAAGATCCGGGAAGAGCTGCCGGCTGAGATGGTTCAATCAGTTGGATCCCCGAATCAACAGAAGCCCGTTCACAGAAGAGGAAGAGGAGAGGCTAATGACGTCCCACAGGGTTCATGGGAACAGATGGGCCATTATTGCAAGGCTGTTTCCTGGCCGCACTGACAACGCCGTCAAGAACCACTGGCATGTCATCATGGCTCGCAAGTCCAGGGACAGCTCCAAAGCCAAAGCCAAAGCCAAAGCCAAAACCAAAACCAAAACCCTAACCCCATCATCTCAAAATCACCTTCTCTTTTCTTCCTTTCTGCAAACGTCATGTCCACCAAACAACAACGCTTCCCTCTTTCTCAACCACTCTCTATATCCAAACCCCATTTCTTCATTCATCCCCAAACCAACAGATAGAAGCGTGGAGTTTTACGACTTTCTCCACCTAAACGCTGAGTCCATTAACGCAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTGAACCAAGAAGCCACTGCCACCGCCGCCCGCCCGCTATTTCCATTCATTGATTTCTTTTCTGCCCAAACCTCCAACTCCATCTCATCCTCACATAATTAA

Coding sequence (CDS)

ATGTGCAGCAGAGGCCACTGGAGACCTGCCGAAGACGACAAGCTTCGGGAGCTGGTGGAGCGATACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTTCTAGGAAGATCCGGGAAGAGCTGCCGGCTGAGATGGTTCAATCAGTTGGATCCCCGAATCAACAGAAGCCCGTTCACAGAAGAGGAAGAGGAGAGGCTAATGACGTCCCACAGGGTTCATGGGAACAGATGGGCCATTATTGCAAGGCTGTTTCCTGGCCGCACTGACAACGCCGTCAAGAACCACTGGCATGTCATCATGGCTCGCAAGTCCAGGGACAGCTCCAAAGCCAAAGCCAAAGCCAAAGCCAAAACCAAAACCAAAACCCTAACCCCATCATCTCAAAATCACCTTCTCTTTTCTTCCTTTCTGCAAACGTCATGTCCACCAAACAACAACGCTTCCCTCTTTCTCAACCACTCTCTATATCCAAACCCCATTTCTTCATTCATCCCCAAACCAACAGATAGAAGCGTGGAGTTTTACGACTTTCTCCACCTAAACGCTGAGTCCATTAACGCAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTGAACCAAGAAGCCACTGCCACCGCCGCCCGCCCGCTATTTCCATTCATTGATTTCTTTTCTGCCCAAACCTCCAACTCCATCTCATCCTCACATAATTAA

Protein sequence

MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN

Homology

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BLAST of Carg04694 vs. NCBI nr
Match: XP_022924085.1 (transcription factor MYB52-like [Cucurbita moschata] >KAG6584475.1 Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020062.1 Transcription factor MYB52 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 478.0 bits (1229), Expect = 4.6e-131
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180
           TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH
Sbjct: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180

Query: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 236
           LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN
Sbjct: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 235

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BLAST of Carg04694 vs. NCBI nr
Match: XP_023520216.1 (transcription factor MYB52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.2e-128
Identity = 232/235 (98.72%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKA  K
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKA--K 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180
           TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH
Sbjct: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180

Query: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 236
           LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN
Sbjct: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 233

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BLAST of Carg04694 vs. NCBI nr
Match: XP_023001003.1 (transcription factor MYB52-like [Cucurbita maxima])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 227/239 (94.98%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAK-- 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAK  
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKAK 120

Query: 121 --TKTKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFY 180
             TKT+TL+PSSQ+HLL SSFLQTSCPP NNASLFLNHSLYPNPISSFIPKPTDRSVEFY
Sbjct: 121 AITKTQTLSPSSQSHLLLSSFLQTSCPP-NNASLFLNHSLYPNPISSFIPKPTDRSVEFY 180

Query: 181 DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 236
           DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNS+SSSHN
Sbjct: 181 DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSVSSSHN 238

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BLAST of Carg04694 vs. NCBI nr
Match: XP_038895550.1 (transcription factor MYB54-like [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 7.2e-76
Identity = 165/253 (65.22%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM SHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+    K+K + +T 
Sbjct: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRN----KSKTQTQTP 120

Query: 121 TKTLTPSSQNH---------LLFSSFLQT-SCPPNNNASLFLNHSLYPNPISSFIPKP-- 180
           + +L   + NH         LL SSFLQ  +CP +N               S FIPKP  
Sbjct: 121 SNSLHHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSN---------------SLFIPKPPS 180

Query: 181 -----TDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFS 233
                T+ SV +YDFL++N ESIN SEVIDNSRKEDYEEVN        + + PFIDFFS
Sbjct: 181 VDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNN----GEHQSVLPFIDFFS 230

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BLAST of Carg04694 vs. NCBI nr
Match: XP_011649446.1 (transcription factor MYB52 [Cucumis sativus] >KGN63930.1 hypothetical protein Csa_013427 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 6.8e-74
Identity = 154/244 (63.11%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+ SK +   +  T+
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTLTQTLTQ 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRS-------- 180
           T     ++ N LL SSFLQ    P +N               SFIPKP            
Sbjct: 121 THN-NNNNNNRLLLSSFLQLHAYPTSNI--------------SFIPKPPPDDAAAAAAAH 180

Query: 181 -----VEFYDFLHLNA-ESINASEVIDN-SRKEDYEEVNQEATATAARPLFPFIDFFSAQ 230
                + +YDFL +N+ +S+N SEVIDN SRKEDYEEVN          L PFIDFFSA 
Sbjct: 181 SSCSIIHYYDFLQVNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSAS 229

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BLAST of Carg04694 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.2e-61
Identity = 128/246 (52.03%), Postives = 154/246 (62.60%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERL+ SHR+HGNRW++IAR FPGRTDNAVKNHWHVIMAR+ R+ SK + +      
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLY-----------------PNPISS 180
           T   T    N+       + +     N     +H  +                   PI  
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQE 181

Query: 181 FIPKPTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFS 230
                T R +EFY+FL +N +S    E+IDNSRK++ E+V+Q           PF DF S
Sbjct: 182 GAIDQTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQN-NRIPNENCVPFFDFLS 241

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BLAST of Carg04694 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.2e-58
Identity = 125/254 (49.21%), Postives = 157/254 (61.81%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERL+ +HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMAR++R +SK +        
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPS---- 122

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPK------------- 180
               T SS + +     + +S   N+N S      ++P    +F  K             
Sbjct: 123 ----TTSSSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHINHLHFLKEF 182

Query: 181 ------------PTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPL 230
                        + + +EFY+FL +N +S N SE+ID    +D  +  +  + T     
Sbjct: 183 FTGKIALNHKANQSKKPMEFYNFLQVNTDS-NKSEIID----QDSGQSKRSDSDTKHESH 242

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BLAST of Carg04694 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 6.0e-49
Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 46  LCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFT 105

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM +HR +GN+WA+IARLFPGRTDNAVKNHWHV+MAR+ R+ S A  + K  + 
Sbjct: 106 EEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRRKPSSS 165

Query: 121 TKTLTPS 128
           + +  P+
Sbjct: 166 SASPAPA 172

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BLAST of Carg04694 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.8e-49
Identity = 111/233 (47.64%), Postives = 139/233 (59.66%), Query Frame = 0


Query: 3   SRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTK 122
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMARK R+ S +  + K     K
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSLK 225

Query: 123 TLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPI---------SSFIPKPTDRSV 182
            L   + N  +F+ F  T     + AS      + P P          S  +    +  +
Sbjct: 226 PLI--NPNPHIFNDFDPTRLALTHLASSDHKQLMLPVPCFPGYDHENESPLMVDMFETQM 285

Query: 183 EFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQT 227
              D++    E+     +    + E +E +N+E      +P  PF DF    T
Sbjct: 286 MVGDYIAWTQEATTFDFLNQTGKSEIFERINEE-----KKP--PFFDFLGLGT 329

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BLAST of Carg04694 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.3e-47
Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 4   RGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTKT 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MARK R+ S A  + K  +    
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

Query: 124 LTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSF 165
               + NH         +  PN ++ +  NH  +  P   F
Sbjct: 218 KPHLTNNH-------HPNPNPNYHSFISTNH-YFAQPFPEF 250

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BLAST of Carg04694 vs. ExPASy TrEMBL
Match: A0A6J1EDT2 (transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.2e-131
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180
           TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH
Sbjct: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFYDFLH 180

Query: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 236
           LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN
Sbjct: 181 LNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 235

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BLAST of Carg04694 vs. ExPASy TrEMBL
Match: A0A6J1KP91 (transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 5.9e-124
Identity = 227/239 (94.98%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAK-- 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAK  
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKAK 120

Query: 121 --TKTKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRSVEFY 180
             TKT+TL+PSSQ+HLL SSFLQTSCPP NNASLFLNHSLYPNPISSFIPKPTDRSVEFY
Sbjct: 121 AITKTQTLSPSSQSHLLLSSFLQTSCPP-NNASLFLNHSLYPNPISSFIPKPTDRSVEFY 180

Query: 181 DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSISSSHN 236
           DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNS+SSSHN
Sbjct: 181 DFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTSNSVSSSHN 238

[Close]

BLAST of Carg04694 vs. ExPASy TrEMBL
Match: A0A0A0LPV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.3e-74
Identity = 154/244 (63.11%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+ SK +   +  T+
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTLTQTLTQ 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRS-------- 180
           T     ++ N LL SSFLQ    P +N               SFIPKP            
Sbjct: 121 THN-NNNNNNRLLLSSFLQLHAYPTSNI--------------SFIPKPPPDDAAAAAAAH 180

Query: 181 -----VEFYDFLHLNA-ESINASEVIDN-SRKEDYEEVNQEATATAARPLFPFIDFFSAQ 230
                + +YDFL +N+ +S+N SEVIDN SRKEDYEEVN          L PFIDFFSA 
Sbjct: 181 SSCSIIHYYDFLQVNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSAS 229

[Close]

BLAST of Carg04694 vs. ExPASy TrEMBL
Match: A0A1S3C1Q2 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.6e-73
Identity = 152/245 (62.04%), Postives = 172/245 (70.20%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+ SK +   +  T+
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTLTQTLTQ 120

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTDRS-------- 180
           T     ++ + LL SSFLQ                 YP    SF+PKP            
Sbjct: 121 THNNNHNNNHRLLLSSFLQLHA--------------YPTSTISFVPKPPSDDAAAAAAAH 180

Query: 181 -----VEFYDFLHLNA-ESINASEVIDN-SRKEDYEEVNQEATATAARP-LFPFIDFFSA 230
                + +YDFL +N+ +S N SEVIDN SRKEDYEEVN    +   +  L PFIDFFSA
Sbjct: 181 SSCSIIHYYDFLQVNSTDSTNGSEVIDNSSRKEDYEEVNNNNNSGEQQAVLLPFIDFFSA 231

[Close]

BLAST of Carg04694 vs. ExPASy TrEMBL
Match: A0A6J1CAM4 (transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111008971 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.7e-68
Identity = 156/235 (66.38%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVER+G HNWNAIAQK+ GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 35  MCSRGHWRPAEDEKLRELVERHGAHNWNAIAQKVEGRSGKSCRLRWFNQLDPRINRTPFT 94

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           ++EE RL+ SHR+HGNRWAIIAR FPGRTDNA+KNHWHVIMAR     SK K+K      
Sbjct: 95  QDEERRLLASHRIHGNRWAIIARHFPGRTDNALKNHWHVIMAR-----SKRKSK------ 154

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPT-DRS-----VE 180
                 S+QNH    +F      PN   S        PNP SS IP PT D S     VE
Sbjct: 155 ------STQNHHRLFNF------PNIYYS-------SPNPTSS-IPNPTPDTSNDHAVVE 214

Query: 181 FYDFLHLNAESINA--SEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQTS 228
           FYDFLHLNA+ I A  SEVIDNSRK+D EEVNQ+A A  A PL PFIDFFSAQTS
Sbjct: 215 FYDFLHLNADYITATRSEVIDNSRKDD-EEVNQQAQADDALPL-PFIDFFSAQTS 236

[Close]

BLAST of Carg04694 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 235.7 bits (600), Expect = 3.7e-62
Identity = 128/246 (52.03%), Postives = 154/246 (62.60%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERL+ SHR+HGNRW++IAR FPGRTDNAVKNHWHVIMAR+ R+ SK + +      
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLY-----------------PNPISS 180
           T   T    N+       + +     N     +H  +                   PI  
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQE 181

Query: 181 FIPKPTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFS 230
                T R +EFY+FL +N +S    E+IDNSRK++ E+V+Q           PF DF S
Sbjct: 182 GAIDQTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQN-NRIPNENCVPFFDFLS 241

[Close]

BLAST of Carg04694 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59
Identity = 125/254 (49.21%), Postives = 157/254 (61.81%), Query Frame = 0


Query: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120
           EEEEERL+ +HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMAR++R +SK +        
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPS---- 122

Query: 121 TKTLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPK------------- 180
               T SS + +     + +S   N+N S      ++P    +F  K             
Sbjct: 123 ----TTSSSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHINHLHFLKEF 182

Query: 181 ------------PTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPL 230
                        + + +EFY+FL +N +S N SE+ID    +D  +  +  + T     
Sbjct: 183 FTGKIALNHKANQSKKPMEFYNFLQVNTDS-NKSEIID----QDSGQSKRSDSDTKHESH 242

[Close]

BLAST of Carg04694 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 195.3 bits (495), Expect = 5.6e-50
Identity = 111/233 (47.64%), Postives = 139/233 (59.66%), Query Frame = 0


Query: 3   SRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTK 122
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMARK R+ S +  + K     K
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSLK 225

Query: 123 TLTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPI---------SSFIPKPTDRSV 182
            L   + N  +F+ F  T     + AS      + P P          S  +    +  +
Sbjct: 226 PLI--NPNPHIFNDFDPTRLALTHLASSDHKQLMLPVPCFPGYDHENESPLMVDMFETQM 285

Query: 183 EFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSAQT 227
              D++    E+     +    + E +E +N+E      +P  PF DF    T
Sbjct: 286 MVGDYIAWTQEATTFDFLNQTGKSEIFERINEE-----KKP--PFFDFLGLGT 329

[Close]

BLAST of Carg04694 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 4   RGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTKT 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MARK R+ S A  + K  +    
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

Query: 124 LTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSF 165
               + NH         +  PN ++ +  NH  +  P   F
Sbjct: 218 KPHLTNNH-------HPNPNPNYHSFISTNH-YFAQPFPEF 250

[Close]

BLAST of Carg04694 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 4   RGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTKTKT 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MARK R+ S A  + K  +    
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

Query: 124 LTPSSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSF 165
               + NH         +  PN ++ +  NH  +  P   F
Sbjct: 218 KPHLTNNH-------HPNPNPNYHSFISTNH-YFAQPFPEF 250

The following BLAST results are available for this feature:

BLAST of Carg04694 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924085.1	4.6e-131	100.00	transcription factor MYB52-like [Cucurbita moschata] >KAG6584475.1 Transcription...	[more]
XP_023520216.1	6.2e-128	98.72	transcription factor MYB52-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001003.1	1.2e-123	94.98	transcription factor MYB52-like [Cucurbita maxima]	[more]
XP_038895550.1	7.2e-76	65.22	transcription factor MYB54-like [Benincasa hispida]	[more]
XP_011649446.1	6.8e-74	63.11	transcription factor MYB52 [Cucumis sativus] >KGN63930.1 hypothetical protein Cs...	[more]

BLAST of Carg04694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	5.2e-61	52.03	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9FX36	4.2e-58	49.21	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	6.0e-49	69.29	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9SEZ4	7.8e-49	47.64	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q9LQX5	3.3e-47	59.01	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]

BLAST of Carg04694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDT2	2.2e-131	100.00	transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE...	[more]
A0A6J1KP91	5.9e-124	94.98	transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4...	[more]
A0A0A0LPV0	3.3e-74	63.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1	[more]
A0A1S3C1Q2	3.6e-73	62.04	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 ...	[more]
A0A6J1CAM4	2.7e-68	66.38	transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111008971 P...	[more]

BLAST of Carg04694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17950.1	3.7e-62	52.03	myb domain protein 52	[more]
AT1G73410.1	2.9e-59	49.21	myb domain protein 54	[more]
AT1G69560.1	5.6e-50	47.64	myb domain protein 105	[more]
AT1G26780.1	2.3e-48	59.01	myb domain protein 117	[more]
AT1G26780.2	2.3e-48	59.01	myb domain protein 117	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..52 e-value: 1.4E-14 score: 64.4 coord: 55..103 e-value: 1.3E-13 score: 61.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 51..101 score: 9.837111
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..50 score: 11.033188
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..48 e-value: 5.79122E-14 score: 62.2078
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..98 e-value: 5.4182E-11 score: 54.1186
None	No IPR available	GENE3D	1.10.10.60		coord: 4..55 e-value: 1.1E-23 score: 84.9
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..67 e-value: 1.4E-16 score: 60.4
None	No IPR available	GENE3D	1.10.10.60		coord: 57..129 e-value: 4.1E-19 score: 70.4
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 1..117
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 169..228 coord: 1..117
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 169..228
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..50 score: 19.631907
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 51..105 score: 25.567307
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04694-RA	Carg04694-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding